RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 ATP8A2Q9NTI2 1148 aa12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 DACT1Q9NYF0 836 aa12.58□□□□□ -0.4
PHACTR4-204ENST00000493669 IFNAR1P17181 557 aa12.57□□□□□ -0.4
PHACTR4-204ENST00000493669 IARSP41252 1262 aaKnown RBP12.57□□□□□ -0.4
PHACTR4-204ENST00000493669 FOSBP53539 338 aa12.57□□□□□ -0.4
PHACTR4-204ENST00000493669 CCDC24Q8N4L8 307 aa12.57□□□□□ -0.4
PHACTR4-204ENST00000493669 SDR42E1Q8WUS8 393 aa12.57□□□□□ -0.4
PHACTR4-204ENST00000493669 POLR3EQ9NVU0 708 aa12.57□□□□□ -0.4
PHACTR4-204ENST00000493669 TFCP2L1Q9NZI6 479 aa12.57□□□□□ -0.4
PHACTR4-204ENST00000493669 ZNF804AQ7Z570 1209 aa12.57□□□□□ -0.4
PHACTR4-204ENST00000493669 RNF214Q8ND24 703 aa12.57□□□□□ -0.4
PHACTR4-204ENST00000493669 RBM17Q96I25 401 aaKnown RBP12.57□□□□□ -0.4
PHACTR4-204ENST00000493669 UBAC1Q9BSL1 405 aa12.57□□□□□ -0.4
PHACTR4-204ENST00000493669 ALG1Q9BT22 464 aa12.57□□□□□ -0.4
PHACTR4-204ENST00000493669 TNMDQ9H2S6 317 aa12.57□□□□□ -0.4
PHACTR4-204ENST00000493669 ANKIB1Q9P2G1 1089 aa12.57□□□□□ -0.4
PHACTR4-204ENST00000493669 SERPINB2P05120 415 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 CDC27P30260 824 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 GUCY1B3Q02153 619 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 KIF23Q02241 960 aaPredicted RBP12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 TDRD7Q8NHU6 1098 aaKnown RBP12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 KCNG4Q8TDN1 519 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 SENP2Q9HC62 589 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 TOMM22Q9NS69 142 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 FAM217BQ9NTX9 383 aaPredicted RBP12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 LAMB1P07942 1786 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 CTAGE5O15320 804 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 FMNL1O95466 1100 aaPredicted RBP12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 RRP12Q5JTH9 1297 aaKnown RBP12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 MYSM1Q5VVJ2 828 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 TMC4Q7Z404 712 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 INCENPQ9NQS7 918 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 A0A1W2PQ27 194 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 A0A1W2PQ64 194 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 A0A1W2PQD8 194 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 MINDY4BA8MYZ0 360 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 ESPNB1AK53 854 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 ATP2B4P23634 1241 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 HOXA10P31260 410 aaPredicted RBP12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 DYNLL1P63167 89 aaKnown RBP12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 SSRP1Q08945 709 aaKnown RBP12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 SBK1Q52WX2 424 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 RAB11FIP4Q86YS3 637 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 CERS3Q8IU89 383 aa12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 ARPP21Q9UBL0 812 aaPredicted RBP12.56□□□□□ -0.4
PHACTR4-204ENST00000493669 ORC4O43929 436 aa12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 BBOX1O75936 387 aa12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 SLC3A2P08195 630 aaKnown RBP12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 GSTO1P78417 241 aa12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 CHAF1AQ13111 956 aaPredicted RBP12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 TRIM29Q14134 588 aa12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 SEC23AQ15436 765 aa12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 RTN1Q16799 776 aa12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 TPRNQ4KMQ1 711 aa12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 ECM29Q5VYK3 1845 aa12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 KLRG2A4D1S0 409 aaPredicted RBP12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 CAVIN2O95810 425 aa12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 CTR9Q6PD62 1173 aa12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 CCDC73Q6ZRK6 1079 aa12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 TXNRD3Q86VQ6 643 aa12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 DZIP1Q86YF9 867 aaKnown RBP12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 TRIM22Q8IYM9 498 aa12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 CRAMP1Q96RY5 1269 aa12.55□□□□□ -0.4
PHACTR4-204ENST00000493669 DLEC1Q9Y238 1755 aa12.54□□□□□ -0.4
PHACTR4-204ENST00000493669 PRDX5P30044 214 aa12.54□□□□□ -0.4
PHACTR4-204ENST00000493669 ADALQ6DHV7 355 aa12.54□□□□□ -0.4
PHACTR4-204ENST00000493669 LINC00301Q8NCQ3 95 aa12.54□□□□□ -0.4
PHACTR4-204ENST00000493669 PODXL2Q9NZ53 605 aa12.54□□□□□ -0.4
PHACTR4-204ENST00000493669 RANBP6O60518 1105 aaKnown RBP12.54□□□□□ -0.4
PHACTR4-204ENST00000493669 PPFIA3O75145 1194 aa12.54□□□□□ -0.4
PHACTR4-204ENST00000493669 NR1I2O75469 434 aa12.54□□□□□ -0.4
PHACTR4-204ENST00000493669 TRIM37O94972 964 aa12.54□□□□□ -0.4
PHACTR4-204ENST00000493669 KRT40Q6A162 431 aa12.54□□□□□ -0.4
PHACTR4-204ENST00000493669 IQCA1Q86XH1 822 aa12.54□□□□□ -0.4
PHACTR4-204ENST00000493669 ZNF654Q8IZM8 581 aa12.54□□□□□ -0.4
PHACTR4-204ENST00000493669 DCP1AQ9NPI6 582 aaPredicted RBP12.54□□□□□ -0.4
PHACTR4-204ENST00000493669 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.54□□□□□ -0.4
PHACTR4-204ENST00000493669 LRRC37AA6NMS7 1700 aa12.54□□□□□ -0.4
PHACTR4-204ENST00000493669 TNKSO95271 1327 aa12.54□□□□□ -0.4
PHACTR4-204ENST00000493669 LDHBP07195 334 aaKnown RBP12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 CALM1P0DP23 149 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 CALM2P0DP24 149 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 CALM3P0DP25 149 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 CLCN1P35523 988 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 ME1P48163 572 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 CEBPZQ03701 1054 aaKnown RBP12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 FAM160A1Q05DH4 1040 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 TXNRD1Q16881 649 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 OTUD7BQ6GQQ9 843 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 CCAR1Q8IX12 1150 aaKnown RBP12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 ZSCAN10Q96SZ4 725 aaPredicted RBP12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 RRAGDQ9NQL2 400 aaPredicted RBP12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 POLRMTO00411 1230 aaKnown RBP12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 LDHCP07864 332 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 RXRAP19793 462 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 U2AF2P26368 475 aaKnown RBP eCLIP12.53□□□□□ -0.44e-8■■■□□ 17.9
PHACTR4-204ENST00000493669 TYRO3Q06418 890 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 STK38Q15208 465 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 FANCBQ8NB91 859 aa12.53□□□□□ -0.4
PHACTR4-204ENST00000493669 FAM200AQ8TCP9 573 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms