RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 ZFYP08048 801 aaPredicted RBP12□□□□□ -0.49
PRPF3-206ENST00000493553 KCNJ4P48050 445 aa12□□□□□ -0.49
PRPF3-206ENST00000493553 RAB15P59190 212 aa12□□□□□ -0.49
PRPF3-206ENST00000493553 CWC27Q6UX04 472 aaKnown RBP12□□□□□ -0.49
PRPF3-206ENST00000493553 CLEC17AQ6ZS10 378 aa12□□□□□ -0.49
PRPF3-206ENST00000493553 KCNB2Q92953 911 aa12□□□□□ -0.49
PRPF3-206ENST00000493553 CHMP4CQ96CF2 233 aa12□□□□□ -0.49
PRPF3-206ENST00000493553 ZSCAN31Q96LW9 406 aaPredicted RBP12□□□□□ -0.49
PRPF3-206ENST00000493553 LSG1Q9H089 658 aaKnown RBP12□□□□□ -0.49
PRPF3-206ENST00000493553 TMPRSS4Q9NRS4 437 aa12□□□□□ -0.49
PRPF3-206ENST00000493553 TRMT112Q9UI30 125 aaKnown RBP12□□□□□ -0.49
PRPF3-206ENST00000493553 DBNLQ9UJU6 430 aaKnown RBP12□□□□□ -0.49
PRPF3-206ENST00000493553 TBC1D2BQ9UPU7 963 aa12□□□□□ -0.49
PRPF3-206ENST00000493553 AFDNP55196 1824 aaKnown RBP12□□□□□ -0.49
PRPF3-206ENST00000493553 WFS1O76024 890 aa11.99□□□□□ -0.49
PRPF3-206ENST00000493553 MCM4P33991 863 aa11.99□□□□□ -0.49
PRPF3-206ENST00000493553 RAB3GAP1Q15042 981 aa11.99□□□□□ -0.49
PRPF3-206ENST00000493553 ANKRD1Q15327 319 aa11.99□□□□□ -0.49
PRPF3-206ENST00000493553 GORABQ5T7V8 394 aa11.99□□□□□ -0.49
PRPF3-206ENST00000493553 ATG9AQ7Z3C6 839 aa11.99□□□□□ -0.49
PRPF3-206ENST00000493553 ZNF34Q8IZ26 560 aa11.99□□□□□ -0.49
PRPF3-206ENST00000493553 ZNF784Q8NCA9 323 aaPredicted RBP11.99□□□□□ -0.49
PRPF3-206ENST00000493553 ZBTB1Q9Y2K1 713 aa11.99□□□□□ -0.49
PRPF3-206ENST00000493553 CCDC171Q6TFL3 1326 aa11.99□□□□□ -0.49
PRPF3-206ENST00000493553 PALLDQ8WX93 1383 aa11.99□□□□□ -0.49
PRPF3-206ENST00000493553 ITGB4P16144 1822 aa11.99□□□□□ -0.49
PRPF3-206ENST00000493553 TUBGCP6Q96RT7 1819 aa11.98□□□□□ -0.49
PRPF3-206ENST00000493553 CICQ96RK0 1608 aaPredicted RBP11.98□□□□□ -0.49
PRPF3-206ENST00000493553 SH3TC1Q8TE82 1336 aa11.98□□□□□ -0.49
PRPF3-206ENST00000493553 IRS4O14654 1257 aaPredicted RBP11.98□□□□□ -0.49
PRPF3-206ENST00000493553 LILRA1O75019 489 aa11.98□□□□□ -0.49
PRPF3-206ENST00000493553 FRAT2O75474 233 aaPredicted RBP11.98□□□□□ -0.49
PRPF3-206ENST00000493553 CRKLP46109 303 aaKnown RBP11.98□□□□□ -0.49
PRPF3-206ENST00000493553 CTSWP56202 376 aa11.98□□□□□ -0.49
PRPF3-206ENST00000493553 ZSCAN25Q6NSZ9 544 aa11.98□□□□□ -0.49
PRPF3-206ENST00000493553 NPAS3Q8IXF0 933 aa11.98□□□□□ -0.49
PRPF3-206ENST00000493553 KBTBD3Q8NAB2 608 aa11.98□□□□□ -0.49
PRPF3-206ENST00000493553 ZNF512BQ96KM6 892 aaPredicted RBP11.98□□□□□ -0.49
PRPF3-206ENST00000493553 UTP14AQ9BVJ6 771 aaKnown RBP11.98□□□□□ -0.49
PRPF3-206ENST00000493553 BOLA2Q9H3K6 86 aa11.98□□□□□ -0.49
PRPF3-206ENST00000493553 HELLSQ9NRZ9 838 aa11.98□□□□□ -0.49
PRPF3-206ENST00000493553 NXF1Q9UBU9 619 aaKnown RBP11.98□□□□□ -0.49
PRPF3-206ENST00000493553 RTL9Q8NET4 1388 aa11.97□□□□□ -0.49
PRPF3-206ENST00000493553 MROH5Q6ZUA9 1318 aa11.97□□□□□ -0.49
PRPF3-206ENST00000493553 CUL4AQ13619 759 aa11.97□□□□□ -0.49
PRPF3-206ENST00000493553 TSGA10IPQ3SY00 556 aa11.97□□□□□ -0.49
PRPF3-206ENST00000493553 VPS53Q5VIR6 699 aa11.97□□□□□ -0.49
PRPF3-206ENST00000493553 INTS5Q6P9B9 1019 aaKnown RBP11.97□□□□□ -0.49
PRPF3-206ENST00000493553 KLHDC4Q8TBB5 520 aa11.97□□□□□ -0.49
PRPF3-206ENST00000493553 MAP4K1Q92918 833 aa11.97□□□□□ -0.49
PRPF3-206ENST00000493553 NEUROD6Q96NK8 337 aa11.97□□□□□ -0.49
PRPF3-206ENST00000493553 C8orf37Q96NL8 207 aa11.97□□□□□ -0.49
PRPF3-206ENST00000493553 SLC4A9Q96Q91 983 aa11.97□□□□□ -0.49
PRPF3-206ENST00000493553 SH2B1Q9NRF2 756 aaPredicted RBP11.97□□□□□ -0.49
PRPF3-206ENST00000493553 ISY1Q9ULR0 285 aaKnown RBP11.97□□□□□ -0.49
PRPF3-206ENST00000493553 CYP46A1Q9Y6A2 500 aa11.97□□□□□ -0.49
PRPF3-206ENST00000493553 ZNF831Q5JPB2 1677 aa11.97□□□□□ -0.49
PRPF3-206ENST00000493553 CNTNAP4Q9C0A0 1308 aa11.96□□□□□ -0.49
PRPF3-206ENST00000493553 SPINT1O43278 529 aa11.96□□□□□ -0.49
PRPF3-206ENST00000493553 MAN1A2O60476 641 aa11.96□□□□□ -0.49
PRPF3-206ENST00000493553 MAP4K4O95819 1239 aaPredicted RBP11.96□□□□□ -0.49
PRPF3-206ENST00000493553 HMGB1P09429 215 aaKnown RBP11.96□□□□□ -0.49
PRPF3-206ENST00000493553 UQCRFS1P1P0C7P4 283 aa11.96□□□□□ -0.49
PRPF3-206ENST00000493553 NMIQ13287 307 aaPredicted RBP11.96□□□□□ -0.49
PRPF3-206ENST00000493553 MCM6Q14566 821 aa11.96□□□□□ -0.49
PRPF3-206ENST00000493553 TTF1Q15361 905 aaPredicted RBP11.96□□□□□ -0.49
PRPF3-206ENST00000493553 CCDC152Q4G0S7 254 aa11.96□□□□□ -0.49
PRPF3-206ENST00000493553 MCMDC2Q4G0Z9 681 aa11.96□□□□□ -0.49
PRPF3-206ENST00000493553 LDHAL6AQ6ZMR3 332 aa11.96□□□□□ -0.49
PRPF3-206ENST00000493553 TTLL11Q8NHH1 800 aa11.96□□□□□ -0.49
PRPF3-206ENST00000493553 JARID2Q92833 1246 aaPredicted RBP11.96□□□□□ -0.49
PRPF3-206ENST00000493553 FAM89AQ96GI7 184 aa11.96□□□□□ -0.49
PRPF3-206ENST00000493553 DBNDD2Q9BQY9 259 aa11.96□□□□□ -0.49
PRPF3-206ENST00000493553 ALDH8A1Q9H2A2 487 aaPredicted RBP11.96□□□□□ -0.49
PRPF3-206ENST00000493553 PAG1Q9NWQ8 432 aa11.96□□□□□ -0.49
PRPF3-206ENST00000493553 USP21Q9UK80 565 aa11.96□□□□□ -0.49
PRPF3-206ENST00000493553 LIMCH1Q9UPQ0 1083 aa11.96□□□□□ -0.49
PRPF3-206ENST00000493553 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.96□□□□□ -0.49
PRPF3-206ENST00000493553 SNX14Q9Y5W7 946 aa11.96□□□□□ -0.49
PRPF3-206ENST00000493553 BCL9LQ86UU0 1499 aa11.95□□□□□ -0.5
PRPF3-206ENST00000493553 MED23Q9ULK4 1368 aa11.95□□□□□ -0.5
PRPF3-206ENST00000493553 KAT6BQ8WYB5 2073 aa11.95□□□□□ -0.5
PRPF3-206ENST00000493553 A0A1B0GUL7 405 aa11.95□□□□□ -0.5
PRPF3-206ENST00000493553 IFIT1P09914 478 aaKnown RBP11.95□□□□□ -0.5
PRPF3-206ENST00000493553 GPTP24298 496 aa11.95□□□□□ -0.5
PRPF3-206ENST00000493553 SSFA2P28290 1259 aa11.95□□□□□ -0.5
PRPF3-206ENST00000493553 TTC39AQ5SRH9 613 aa11.95□□□□□ -0.5
PRPF3-206ENST00000493553 MEX3CQ5U5Q3 659 aaKnown RBP11.95□□□□□ -0.5
PRPF3-206ENST00000493553 TMX3Q96JJ7 454 aa11.95□□□□□ -0.5
PRPF3-206ENST00000493553 CNNM1Q9NRU3 951 aa11.95□□□□□ -0.5
PRPF3-206ENST00000493553 TLR7Q9NYK1 1049 aaKnown RBP11.95□□□□□ -0.5
PRPF3-206ENST00000493553 ZNF609O15014 1411 aa11.94□□□□□ -0.5
PRPF3-206ENST00000493553 AK9Q5TCS8 1911 aa11.94□□□□□ -0.5
PRPF3-206ENST00000493553 SOBPA7XYQ1 873 aa11.94□□□□□ -0.5
PRPF3-206ENST00000493553 CAMTA2O94983 1202 aa11.94□□□□□ -0.5
PRPF3-206ENST00000493553 ITGA6P23229 1130 aa11.94□□□□□ -0.5
PRPF3-206ENST00000493553 IRF5Q13568 498 aa11.94□□□□□ -0.5
PRPF3-206ENST00000493553 NECTIN1Q15223 517 aa11.94□□□□□ -0.5
PRPF3-206ENST00000493553 HLFQ16534 295 aa11.94□□□□□ -0.5
PRPF3-206ENST00000493553 ATP2B3Q16720 1220 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms