RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.69□□□□□ -1.18
EWSR1-220ENST00000493426 FAM204AQ9H8W3 233 aa7.69□□□□□ -1.18
EWSR1-220ENST00000493426 HELLSQ9NRZ9 838 aa7.69□□□□□ -1.18
EWSR1-220ENST00000493426 RBM28Q9NW13 759 aaKnown RBP7.69□□□□□ -1.18
EWSR1-220ENST00000493426 TBX22Q9Y458 520 aa7.69□□□□□ -1.18
EWSR1-220ENST00000493426 TAF6LQ9Y6J9 622 aa7.69□□□□□ -1.18
EWSR1-220ENST00000493426 FAM169AQ9Y6X4 670 aa7.69□□□□□ -1.18
EWSR1-220ENST00000493426 ITIH6Q6UXX5 1313 aa7.69□□□□□ -1.18
EWSR1-220ENST00000493426 SH3TC1Q8TE82 1336 aa7.69□□□□□ -1.18
EWSR1-220ENST00000493426 CDHR2Q9BYE9 1310 aa7.69□□□□□ -1.18
EWSR1-220ENST00000493426 FLT4P35916 1363 aa7.69□□□□□ -1.18
EWSR1-220ENST00000493426 CARMIL3Q8ND23 1372 aa7.69□□□□□ -1.18
EWSR1-220ENST00000493426 MYH15Q9Y2K3 1946 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 LRRIQ3A6PVS8 624 aaPredicted RBP7.68□□□□□ -1.18
EWSR1-220ENST00000493426 PPP1R12AO14974 1030 aaPredicted RBP7.68□□□□□ -1.18
EWSR1-220ENST00000493426 CHUKO15111 745 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 FOXO3O43524 673 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 N4BP1O75113 896 aaKnown RBP7.68□□□□□ -1.18
EWSR1-220ENST00000493426 CYP21A2P08686 494 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 PFKFB1P16118 471 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 GPTP24298 496 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 CALRP27797 417 aaKnown RBP7.68□□□□□ -1.18
EWSR1-220ENST00000493426 SYKP43405 635 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 HSPA2P54652 639 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 EIF4A1P60842 406 aaKnown RBP7.68□□□□□ -1.18
EWSR1-220ENST00000493426 VSNL1P62760 191 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 MDM2Q00987 491 aaPredicted RBP7.68□□□□□ -1.18
EWSR1-220ENST00000493426 ITIH3Q06033 890 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 STK3Q13188 491 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 DRP2Q13474 957 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 MCMDC2Q4G0Z9 681 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 PREPLQ4J6C6 727 aaPredicted RBP7.68□□□□□ -1.18
EWSR1-220ENST00000493426 WLSQ5T9L3 541 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 RESP18Q5W5W9 173 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 KCNV1Q6PIU1 500 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 TOGARAM2Q6ZUX3 1019 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 ZNF589Q86UQ0 364 aaPredicted RBP7.68□□□□□ -1.18
EWSR1-220ENST00000493426 TMTC1Q8IUR5 882 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 NUTM2AQ8IVF1 878 aaPredicted RBP7.68□□□□□ -1.18
EWSR1-220ENST00000493426 DDX54Q8TDD1 881 aaKnown RBP7.68□□□□□ -1.18
EWSR1-220ENST00000493426 COG1Q8WTW3 980 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 TBC1D22AQ8WUA7 517 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 KAT2BQ92831 832 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 ZBTB9Q96C00 473 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 EYA1Q99502 592 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 NAPGQ99747 312 aaPredicted RBP7.68□□□□□ -1.18
EWSR1-220ENST00000493426 FSD1Q9BTV5 496 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 MRPL44Q9H9J2 332 aaKnown RBP7.68□□□□□ -1.18
EWSR1-220ENST00000493426 GNL3LQ9NVN8 582 aaKnown RBP7.68□□□□□ -1.18
EWSR1-220ENST00000493426 FANCLQ9NW38 375 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 HOOK1Q9UJC3 728 aaKnown RBP7.68□□□□□ -1.18
EWSR1-220ENST00000493426 HPCAL4Q9UM19 191 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 SUFUQ9UMX1 484 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 SLIT1O75093 1534 aa7.68□□□□□ -1.18
EWSR1-220ENST00000493426 UBR1Q8IWV7 1749 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 PEAK1Q9H792 1746 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 LRRC10BA6NIK2 292 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 TMEM232C9JQI7 657 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 RNF40O75150 1001 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 ARHGAP25P42331 645 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 MRPL12P52815 198 aaKnown RBP7.67□□□□□ -1.18
EWSR1-220ENST00000493426 SETQ01105 290 aaPredicted RBP7.67□□□□□ -1.18
EWSR1-220ENST00000493426 CEBPZQ03701 1054 aaKnown RBP7.67□□□□□ -1.18
EWSR1-220ENST00000493426 NEDD9Q14511 834 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 PTPAQ15257 358 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 NBPF14Q5TI25 921 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 PAPD7Q5XG87 772 aaKnown RBP7.67□□□□□ -1.18
EWSR1-220ENST00000493426 CCDC102BQ68D86 513 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 KANK3Q6NY19 840 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 KSR2Q6VAB6 950 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 SYNE3Q6ZMZ3 975 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 STOX1Q6ZVD7 989 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 APTXQ7Z2E3 356 aaKnown RBP7.67□□□□□ -1.18
EWSR1-220ENST00000493426 C3orf20Q8ND61 904 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 CCDC148Q8NFR7 591 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 LINS1Q8NG48 757 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 SPATA20Q8TB22 786 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 CCDC102AQ96A19 550 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 CABS1Q96KC9 395 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 TCEANC2Q96MN5 208 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 FTOQ9C0B1 505 aaKnown RBP eCLIP7.67□□□□□ -1.18
EWSR1-220ENST00000493426 BICC1Q9H694 974 aaKnown RBP7.67□□□□□ -1.18
EWSR1-220ENST00000493426 PHAXQ9H814 394 aaKnown RBP7.67□□□□□ -1.18
EWSR1-220ENST00000493426 COPRSQ9NQ92 184 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 TOMM22Q9NS69 142 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 RAI14Q9P0K7 980 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 CLIC4Q9Y696 253 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 METP08581 1390 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 HEG1Q9ULI3 1381 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 USP6P35125 1406 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 ARHGAP23Q9P227 1491 aa7.67□□□□□ -1.18
EWSR1-220ENST00000493426 A0A087WWV3 80 aa7.66□□□□□ -1.18
EWSR1-220ENST00000493426 PI4KAP2A4QPH2 592 aa7.66□□□□□ -1.18
EWSR1-220ENST00000493426 GOLGA8KD6RF30 607 aa7.66□□□□□ -1.18
EWSR1-220ENST00000493426 GOLIM4O00461 696 aa7.66□□□□□ -1.18
EWSR1-220ENST00000493426 PSMD14O00487 310 aa7.66□□□□□ -1.18
EWSR1-220ENST00000493426 EIF3HO15372 352 aaKnown RBP eCLIP7.66□□□□□ -1.18
EWSR1-220ENST00000493426 DTNBO60941 627 aa7.66□□□□□ -1.18
EWSR1-220ENST00000493426 PYGBP11216 843 aa7.66□□□□□ -1.18
EWSR1-220ENST00000493426 HSP90B1P14625 803 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms