RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 CTNNA3Q9UI47 895 aa13.81□□□□□ -0.2
LSM2-214ENST00000493387 TAOK2Q9UL54 1235 aa13.81□□□□□ -0.2
LSM2-214ENST00000493387 GOLGB1Q14789 3259 aaKnown RBP13.81□□□□□ -0.2
LSM2-214ENST00000493387 PRKAB2O43741 272 aa13.8□□□□□ -0.2
LSM2-214ENST00000493387 CACNB3P54284 484 aa13.8□□□□□ -0.2
LSM2-214ENST00000493387 NFIAQ12857 509 aa13.8□□□□□ -0.2
LSM2-214ENST00000493387 PICALMQ13492 652 aa13.8□□□□□ -0.2
LSM2-214ENST00000493387 CDC37L1Q7L3B6 337 aa13.8□□□□□ -0.2
LSM2-214ENST00000493387 KRT26Q7Z3Y9 468 aa13.8□□□□□ -0.2
LSM2-214ENST00000493387 TTC6Q86TZ1 520 aa13.8□□□□□ -0.2
LSM2-214ENST00000493387 MAPKAPK5Q8IW41 473 aa13.8□□□□□ -0.2
LSM2-214ENST00000493387 IFNL3Q8IZI9 196 aa13.8□□□□□ -0.2
LSM2-214ENST00000493387 SDR42E1Q8WUS8 393 aa13.8□□□□□ -0.2
LSM2-214ENST00000493387 HOOK2Q96ED9 719 aa13.8□□□□□ -0.2
LSM2-214ENST00000493387 OSBPL5Q9H0X9 879 aaPredicted RBP13.8□□□□□ -0.2
LSM2-214ENST00000493387 NAPBQ9H115 298 aa13.8□□□□□ -0.2
LSM2-214ENST00000493387 DEFB129Q9H1M3 183 aa13.8□□□□□ -0.2
LSM2-214ENST00000493387 FAM198AQ9UFP1 575 aa13.8□□□□□ -0.2
LSM2-214ENST00000493387 MKRN1Q9UHC7 482 aaKnown RBP13.8□□□□□ -0.2
LSM2-214ENST00000493387 FLT1P17948 1338 aa13.8□□□□□ -0.2
LSM2-214ENST00000493387 POLR3DP05423 398 aaPredicted RBP13.79□□□□□ -0.2
LSM2-214ENST00000493387 TDO2P48775 406 aa13.79□□□□□ -0.2
LSM2-214ENST00000493387 TCP10Q12799 353 aa13.79□□□□□ -0.2
LSM2-214ENST00000493387 RASA3Q14644 834 aa13.79□□□□□ -0.2
LSM2-214ENST00000493387 SBK1Q52WX2 424 aa13.79□□□□□ -0.2
LSM2-214ENST00000493387 ZSCAN29Q8IWY8 852 aaPredicted RBP13.79□□□□□ -0.2
LSM2-214ENST00000493387 ANO2Q9NQ90 1003 aa13.79□□□□□ -0.2
LSM2-214ENST00000493387 DDX4Q9NQI0 724 aaKnown RBP13.79□□□□□ -0.2
LSM2-214ENST00000493387 MCM9Q9NXL9 1143 aa13.79□□□□□ -0.2
LSM2-214ENST00000493387 ARPP21Q9UBL0 812 aaPredicted RBP13.79□□□□□ -0.2
LSM2-214ENST00000493387 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
LSM2-214ENST00000493387 ASTN2O75129 1339 aaPredicted RBP13.79□□□□□ -0.2
LSM2-214ENST00000493387 ZMYM6O95789 1325 aa13.79□□□□□ -0.2
LSM2-214ENST00000493387 COL2A1P02458 1487 aaPredicted RBP13.79□□□□□ -0.2
LSM2-214ENST00000493387 ADAMTSL1Q8N6G6 1762 aa13.78□□□□□ -0.2
LSM2-214ENST00000493387 HLA-DOAP06340 250 aa13.78□□□□□ -0.2
LSM2-214ENST00000493387 SUPT20HL1Q3ZLR7 823 aa13.78□□□□□ -0.2
LSM2-214ENST00000493387 C8orf34Q49A92 452 aa13.78□□□□□ -0.2
LSM2-214ENST00000493387 VPS53Q5VIR6 699 aa13.78□□□□□ -0.2
LSM2-214ENST00000493387 CHADLQ6NUI6 762 aa13.78□□□□□ -0.2
LSM2-214ENST00000493387 ZNF784Q8NCA9 323 aaPredicted RBP13.78□□□□□ -0.2
LSM2-214ENST00000493387 MAP4K1Q92918 833 aa13.78□□□□□ -0.2
LSM2-214ENST00000493387 LSG1Q9H089 658 aaKnown RBP13.78□□□□□ -0.2
LSM2-214ENST00000493387 IL25Q9H293 177 aa13.78□□□□□ -0.2
LSM2-214ENST00000493387 RNF216Q9NWF9 866 aaPredicted RBP13.78□□□□□ -0.2
LSM2-214ENST00000493387 PI4KBQ9UBF8 816 aa13.78□□□□□ -0.2
LSM2-214ENST00000493387 ATRNL1Q5VV63 1379 aa13.78□□□□□ -0.2
LSM2-214ENST00000493387 ECM29Q5VYK3 1845 aa13.78□□□□□ -0.2
LSM2-214ENST00000493387 USP17L12C9JPN9 530 aa13.77□□□□□ -0.21
LSM2-214ENST00000493387 USP17L21D6R901 530 aa13.77□□□□□ -0.21
LSM2-214ENST00000493387 KIF3CO14782 793 aa13.77□□□□□ -0.21
LSM2-214ENST00000493387 FGAP02671 866 aa13.77□□□□□ -0.21
LSM2-214ENST00000493387 SLC3A2P08195 630 aaKnown RBP13.77□□□□□ -0.21
LSM2-214ENST00000493387 CNTNAP1P78357 1384 aa13.77□□□□□ -0.21
LSM2-214ENST00000493387 USP48Q86UV5 1035 aa13.77□□□□□ -0.21
LSM2-214ENST00000493387 FOXP4Q8IVH2 680 aaPredicted RBP13.77□□□□□ -0.21
LSM2-214ENST00000493387 EPB41L4AQ9HCS5 686 aaPredicted RBP13.77□□□□□ -0.21
LSM2-214ENST00000493387 FOXP2O15409 715 aa13.76□□□□□ -0.21
LSM2-214ENST00000493387 NF2P35240 595 aa13.76□□□□□ -0.21
LSM2-214ENST00000493387 PTH1RQ03431 593 aa13.76□□□□□ -0.21
LSM2-214ENST00000493387 IMMTQ16891 758 aaKnown RBP13.76□□□□□ -0.21
LSM2-214ENST00000493387 C12orf60Q5U649 245 aa13.76□□□□□ -0.21
LSM2-214ENST00000493387 RNF20Q5VTR2 975 aa13.76□□□□□ -0.21
LSM2-214ENST00000493387 CTR9Q6PD62 1173 aa13.76□□□□□ -0.21
LSM2-214ENST00000493387 ZFPM1Q8IX07 1006 aa13.76□□□□□ -0.21
LSM2-214ENST00000493387 SMC1BQ8NDV3 1235 aa13.76□□□□□ -0.21
LSM2-214ENST00000493387 RBM46Q8TBY0 533 aaKnown RBP13.76□□□□□ -0.21
LSM2-214ENST00000493387 TMEM39BQ9GZU3 492 aa13.76□□□□□ -0.21
LSM2-214ENST00000493387 EHD4Q9H223 541 aa13.76□□□□□ -0.21
LSM2-214ENST00000493387 SAP30BPQ9UHR5 308 aaKnown RBP13.76□□□□□ -0.21
LSM2-214ENST00000493387 PALD1Q9ULE6 856 aa13.76□□□□□ -0.21
LSM2-214ENST00000493387 TBC1D12O60347 775 aa13.75□□□□□ -0.21
LSM2-214ENST00000493387 TOMM70O94826 608 aa13.75□□□□□ -0.21
LSM2-214ENST00000493387 POTEIP0CG38 1075 aa13.75□□□□□ -0.21
LSM2-214ENST00000493387 POTEJP0CG39 1038 aa13.75□□□□□ -0.21
LSM2-214ENST00000493387 MCCP23508 829 aa13.75□□□□□ -0.21
LSM2-214ENST00000493387 DCAF15Q66K64 600 aa13.75□□□□□ -0.21
LSM2-214ENST00000493387 MAP1SQ66K74 1059 aaPredicted RBP13.75□□□□□ -0.21
LSM2-214ENST00000493387 TEPSINQ96N21 525 aa13.75□□□□□ -0.21
LSM2-214ENST00000493387 CSRNP1Q96S65 589 aa13.75□□□□□ -0.21
LSM2-214ENST00000493387 TRIM34Q9BYJ4 488 aa13.75□□□□□ -0.21
LSM2-214ENST00000493387 UPF2Q9HAU5 1272 aaKnown RBP13.75□□□□□ -0.21
LSM2-214ENST00000493387 ZNF287Q9HBT7 754 aa13.75□□□□□ -0.21
LSM2-214ENST00000493387 HERC5Q9UII4 1024 aaKnown RBP13.75□□□□□ -0.21
LSM2-214ENST00000493387 ANAPC4Q9UJX5 808 aa13.75□□□□□ -0.21
LSM2-214ENST00000493387 RBM8AQ9Y5S9 174 aaKnown RBP13.75□□□□□ -0.21
LSM2-214ENST00000493387 DDTLA6NHG4 134 aaPredicted RBP13.74□□□□□ -0.21
LSM2-214ENST00000493387 MINDY4BA8MYZ0 360 aa13.74□□□□□ -0.21
LSM2-214ENST00000493387 ADM5C9JUS6 153 aa13.74□□□□□ -0.21
LSM2-214ENST00000493387 ZNF213O14771 459 aa13.74□□□□□ -0.21
LSM2-214ENST00000493387 PCP11498 1178 aaKnown RBP13.74□□□□□ -0.21
LSM2-214ENST00000493387 NT5C2P49902 561 aa13.74□□□□□ -0.21
LSM2-214ENST00000493387 PPARAQ07869 468 aa13.74□□□□□ -0.21
LSM2-214ENST00000493387 SH3BP5LQ7L8J4 393 aa13.74□□□□□ -0.21
LSM2-214ENST00000493387 METTL16Q86W50 562 aaKnown RBP13.74□□□□□ -0.21
LSM2-214ENST00000493387 CRACR2BQ8N4Y2 399 aaPredicted RBP13.74□□□□□ -0.21
LSM2-214ENST00000493387 USP26Q9BXU7 913 aa13.74□□□□□ -0.21
LSM2-214ENST00000493387 GLIS2Q9BZE0 524 aaPredicted RBP13.74□□□□□ -0.21
LSM2-214ENST00000493387 SWAP70Q9UH65 585 aa13.74□□□□□ -0.21
LSM2-214ENST00000493387 SERPINB13Q9UIV8 391 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms