RNA–Protein interactions for RNA: ENST00000493259.5

CPA4-210, Transcript of carboxypeptidase A4, humanhuman

TSL 2 BASIC

Gene CPA4, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-210ENST00000493259 KIF16BQ96L93 1317 aa13.68□□□□□ -0.22
CPA4-210ENST00000493259 AK9Q5TCS8 1911 aa13.67□□□□□ -0.22
CPA4-210ENST00000493259 PHF20L1A8MW92 1017 aa13.67□□□□□ -0.22
CPA4-210ENST00000493259 FGFR2P21802 821 aa13.67□□□□□ -0.22
CPA4-210ENST00000493259 PRDX5P30044 214 aa13.67□□□□□ -0.22
CPA4-210ENST00000493259 NCBP3Q53F19 620 aaKnown RBP13.67□□□□□ -0.22
CPA4-210ENST00000493259 NECAB2Q7Z6G3 386 aa13.67□□□□□ -0.22
CPA4-210ENST00000493259 WDR63Q8IWG1 891 aa13.67□□□□□ -0.22
CPA4-210ENST00000493259 C7orf61Q8IZ16 206 aa13.67□□□□□ -0.22
CPA4-210ENST00000493259 SCYL3Q8IZE3 742 aa13.67□□□□□ -0.22
CPA4-210ENST00000493259 SMCR8Q8TEV9 937 aaPredicted RBP13.67□□□□□ -0.22
CPA4-210ENST00000493259 GDF15Q99988 308 aa13.67□□□□□ -0.22
CPA4-210ENST00000493259 PICK1Q9NRD5 415 aa13.67□□□□□ -0.22
CPA4-210ENST00000493259 USP40Q9NVE5 1235 aa13.67□□□□□ -0.22
CPA4-210ENST00000493259 ATRNL1Q5VV63 1379 aa13.67□□□□□ -0.22
CPA4-210ENST00000493259 CAPN2P17655 700 aa13.66□□□□□ -0.22
CPA4-210ENST00000493259 PTPRAP18433 802 aa13.66□□□□□ -0.22
CPA4-210ENST00000493259 Q7L0L9 218 aa13.66□□□□□ -0.22
CPA4-210ENST00000493259 DEFB123Q8N688 67 aa13.66□□□□□ -0.22
CPA4-210ENST00000493259 ZMYND8Q9ULU4 1186 aaPredicted RBP13.66□□□□□ -0.22
CPA4-210ENST00000493259 SLC45A1Q9Y2W3 748 aa13.66□□□□□ -0.22
CPA4-210ENST00000493259 AFG3L2Q9Y4W6 797 aa13.66□□□□□ -0.22
CPA4-210ENST00000493259 ALPK3Q96L96 1907 aa13.66□□□□□ -0.22
CPA4-210ENST00000493259 BMP8BP34820 402 aa13.65□□□□□ -0.22
CPA4-210ENST00000493259 ANKRD13CQ8N6S4 541 aa13.65□□□□□ -0.22
CPA4-210ENST00000493259 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.65□□□□□ -0.22
CPA4-210ENST00000493259 SLURP2P0DP57 97 aa13.64□□□□□ -0.23
CPA4-210ENST00000493259 SLC5A1P13866 664 aa13.64□□□□□ -0.23
CPA4-210ENST00000493259 GPR153Q6NV75 609 aa13.64□□□□□ -0.23
CPA4-210ENST00000493259 COA7Q96BR5 231 aa13.64□□□□□ -0.23
CPA4-210ENST00000493259 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.64□□□□□ -0.23
CPA4-210ENST00000493259 MYH13Q9UKX3 1938 aa13.64□□□□□ -0.23
CPA4-210ENST00000493259 DOCK2Q92608 1830 aa13.64□□□□□ -0.23
CPA4-210ENST00000493259 TRIM75PA6NK02 468 aa13.64□□□□□ -0.23
CPA4-210ENST00000493259 LDHBP07195 334 aaKnown RBP13.64□□□□□ -0.23
CPA4-210ENST00000493259 SYN1P17600 705 aa13.64□□□□□ -0.23
CPA4-210ENST00000493259 RGS3P49796 1198 aa13.64□□□□□ -0.23
CPA4-210ENST00000493259 ZSCAN29Q8IWY8 852 aaPredicted RBP13.64□□□□□ -0.23
CPA4-210ENST00000493259 LPIN2Q92539 896 aa13.64□□□□□ -0.23
CPA4-210ENST00000493259 LRRFIP2Q9Y608 721 aaKnown RBP13.64□□□□□ -0.23
CPA4-210ENST00000493259 SH3BP5LQ7L8J4 393 aa13.63□□□□□ -0.23
CPA4-210ENST00000493259 CCDC84Q86UT8 332 aaPredicted RBP13.63□□□□□ -0.23
CPA4-210ENST00000493259 ANKLE1Q8NAG6 615 aa13.63□□□□□ -0.23
CPA4-210ENST00000493259 AGTPBP1Q9UPW5 1226 aa13.63□□□□□ -0.23
CPA4-210ENST00000493259 STXBP5LQ9Y2K9 1186 aa13.63□□□□□ -0.23
CPA4-210ENST00000493259 LAMA2P24043 3122 aaKnown RBP13.63□□□□□ -0.23
CPA4-210ENST00000493259 EYA2O00167 538 aa13.62□□□□□ -0.23
CPA4-210ENST00000493259 ENTPD3O75355 529 aa13.62□□□□□ -0.23
CPA4-210ENST00000493259 LRIT3Q3SXY7 679 aa13.62□□□□□ -0.23
CPA4-210ENST00000493259 TREML2Q5T2D2 321 aa13.62□□□□□ -0.23
CPA4-210ENST00000493259 IDI2Q9BXS1 227 aa13.62□□□□□ -0.23
CPA4-210ENST00000493259 NBPF3Q9H094 633 aa13.62□□□□□ -0.23
CPA4-210ENST00000493259 PTPRFP10586 1907 aa13.62□□□□□ -0.23
CPA4-210ENST00000493259 VCANP13611 3396 aa13.62□□□□□ -0.23
CPA4-210ENST00000493259 EYSQ5T1H1 3165 aa13.61□□□□□ -0.23
CPA4-210ENST00000493259 DDTLA6NHG4 134 aaPredicted RBP13.61□□□□□ -0.23
CPA4-210ENST00000493259 HMGCRP04035 888 aa13.61□□□□□ -0.23
CPA4-210ENST00000493259 MAGEA10P43363 369 aaPredicted RBP13.61□□□□□ -0.23
CPA4-210ENST00000493259 TRIM32Q13049 653 aa13.61□□□□□ -0.23
CPA4-210ENST00000493259 FAM110CQ1W6H9 321 aa13.61□□□□□ -0.23
CPA4-210ENST00000493259 TDHQ8IZJ6 230 aa13.61□□□□□ -0.23
CPA4-210ENST00000493259 MTMR10Q9NXD2 777 aa13.61□□□□□ -0.23
CPA4-210ENST00000493259 DOCK1Q14185 1865 aa13.61□□□□□ -0.23
CPA4-210ENST00000493259 PHIPQ8WWQ0 1821 aa13.61□□□□□ -0.23
CPA4-210ENST00000493259 RFX7Q2KHR2 1363 aa13.61□□□□□ -0.23
CPA4-210ENST00000493259 SALL1Q9NSC2 1324 aa13.6□□□□□ -0.23
CPA4-210ENST00000493259 CTNND1O60716 968 aaKnown RBP13.6□□□□□ -0.23
CPA4-210ENST00000493259 RFX5P48382 616 aaPredicted RBP13.6□□□□□ -0.23
CPA4-210ENST00000493259 MAP3K10Q02779 954 aa13.6□□□□□ -0.23
CPA4-210ENST00000493259 PICALMQ13492 652 aa13.6□□□□□ -0.23
CPA4-210ENST00000493259 C11orf49Q9H6J7 331 aa13.6□□□□□ -0.23
CPA4-210ENST00000493259 HMX1Q9NP08 348 aaPredicted RBP13.6□□□□□ -0.23
CPA4-210ENST00000493259 DDX4Q9NQI0 724 aaKnown RBP13.6□□□□□ -0.23
CPA4-210ENST00000493259 PNMA3Q9UL41 463 aa13.6□□□□□ -0.23
CPA4-210ENST00000493259 DDX60LQ5H9U9 1706 aaKnown RBP13.6□□□□□ -0.23
CPA4-210ENST00000493259 CUL9Q8IWT3 2517 aa13.6□□□□□ -0.23
CPA4-210ENST00000493259 RPTORQ8N122 1335 aa13.6□□□□□ -0.23
CPA4-210ENST00000493259 ATG9AQ7Z3C6 839 aa13.59□□□□□ -0.23
CPA4-210ENST00000493259 UBE2OQ9C0C9 1292 aaKnown RBP13.59□□□□□ -0.23
CPA4-210ENST00000493259 USP44Q9H0E7 712 aa13.59□□□□□ -0.23
CPA4-210ENST00000493259 GNL3LQ9NVN8 582 aaKnown RBP13.59□□□□□ -0.23
CPA4-210ENST00000493259 GAKO14976 1311 aa13.59□□□□□ -0.23
CPA4-210ENST00000493259 PHKA1P46020 1223 aa13.59□□□□□ -0.23
CPA4-210ENST00000493259 ATP2B3Q16720 1220 aa13.59□□□□□ -0.23
CPA4-210ENST00000493259 COL25A1Q9BXS0 654 aaPredicted RBP13.59□□□□□ -0.23
CPA4-210ENST00000493259 GJD2Q9UKL4 321 aa13.59□□□□□ -0.23
CPA4-210ENST00000493259 DENND2AQ9ULE3 1009 aa13.59□□□□□ -0.23
CPA4-210ENST00000493259 DOCK3Q8IZD9 2030 aa13.58□□□□□ -0.24
CPA4-210ENST00000493259 SPTBN5Q9NRC6 3674 aaKnown RBP13.58□□□□□ -0.24
CPA4-210ENST00000493259 FAM196BA6NMK8 535 aa13.58□□□□□ -0.24
CPA4-210ENST00000493259 DZIP1Q86YF9 867 aaKnown RBP13.58□□□□□ -0.24
CPA4-210ENST00000493259 PROCA1Q8NCQ7 364 aaPredicted RBP13.58□□□□□ -0.24
CPA4-210ENST00000493259 SIL1Q9H173 461 aa13.58□□□□□ -0.24
CPA4-210ENST00000493259 MRS2Q9HD23 443 aa13.58□□□□□ -0.24
CPA4-210ENST00000493259 OGDHLQ9ULD0 1010 aa13.58□□□□□ -0.24
CPA4-210ENST00000493259 DNAH12Q6ZR08 3092 aa13.58□□□□□ -0.24
CPA4-210ENST00000493259 SEMA3EO15041 775 aa13.57□□□□□ -0.24
CPA4-210ENST00000493259 BTDP43251 543 aa13.57□□□□□ -0.24
CPA4-210ENST00000493259 GCLCP48506 637 aaPredicted RBP13.57□□□□□ -0.24
CPA4-210ENST00000493259 SPP2Q13103 211 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms