RNA–Protein interactions for RNA: ENST00000493109.2

COL12A1-209, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-209ENST00000493109 MESP2Q0VG99 397 aa9.93□□□□□ -0.82
COL12A1-209ENST00000493109 FBLN7Q53RD9 439 aa9.93□□□□□ -0.82
COL12A1-209ENST00000493109 FAM214BQ7L5A3 538 aa9.93□□□□□ -0.82
COL12A1-209ENST00000493109 GLYCTKQ8IVS8 523 aa9.93□□□□□ -0.82
COL12A1-209ENST00000493109 TMEM40Q8WWA1 233 aa9.93□□□□□ -0.82
COL12A1-209ENST00000493109 ISL2Q96A47 359 aa9.93□□□□□ -0.82
COL12A1-209ENST00000493109 HEXIM2Q96MH2 286 aaKnown RBP9.93□□□□□ -0.82
COL12A1-209ENST00000493109 KRTAP9-7A8MTY7 169 aa9.92□□□□□ -0.82
COL12A1-209ENST00000493109 RNGTTO60942 597 aaKnown RBP9.92□□□□□ -0.82
COL12A1-209ENST00000493109 CILP2Q8IUL8 1156 aa9.92□□□□□ -0.82
COL12A1-209ENST00000493109 TOP6BLQ8N6T0 577 aa9.92□□□□□ -0.82
COL12A1-209ENST00000493109 EPS8L3Q8TE67 593 aaKnown RBP9.92□□□□□ -0.82
COL12A1-209ENST00000493109 HRASLS5Q96KN8 279 aa9.92□□□□□ -0.82
COL12A1-209ENST00000493109 TNKS2Q9H2K2 1166 aa9.92□□□□□ -0.82
COL12A1-209ENST00000493109 PRDM7Q9NQW5 492 aa9.92□□□□□ -0.82
COL12A1-209ENST00000493109 NDUFB5O43674 189 aa9.91□□□□□ -0.82
COL12A1-209ENST00000493109 GADD45BO75293 160 aaPredicted RBP9.91□□□□□ -0.82
COL12A1-209ENST00000493109 NIF3L1Q9GZT8 377 aa9.91□□□□□ -0.82
COL12A1-209ENST00000493109 DNAJC25Q9H1X3 360 aa9.91□□□□□ -0.82
COL12A1-209ENST00000493109 PCOLCE2Q9UKZ9 415 aa9.91□□□□□ -0.82
COL12A1-209ENST00000493109 PDE3BQ13370 1112 aa9.9□□□□□ -0.82
COL12A1-209ENST00000493109 ITIH2P19823 946 aa9.89□□□□□ -0.83
COL12A1-209ENST00000493109 ZC3H12AQ5D1E8 599 aaKnown RBP9.89□□□□□ -0.83
COL12A1-209ENST00000493109 PI16Q6UXB8 463 aa9.89□□□□□ -0.83
COL12A1-209ENST00000493109 FLAD1Q8NFF5 587 aa9.89□□□□□ -0.83
COL12A1-209ENST00000493109 TMEM265A0A087WTH1 108 aa9.88□□□□□ -0.83
COL12A1-209ENST00000493109 SLC23A3Q6PIS1 610 aa9.88□□□□□ -0.83
COL12A1-209ENST00000493109 UBE3DQ7Z6J8 389 aa9.88□□□□□ -0.83
COL12A1-209ENST00000493109 KCNB2Q92953 911 aa9.88□□□□□ -0.83
COL12A1-209ENST00000493109 TRAK1Q9UPV9 953 aa9.88□□□□□ -0.83
COL12A1-209ENST00000493109 ZNF503-AS2A6NEH8 195 aa9.87□□□□□ -0.83
COL12A1-209ENST00000493109 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.87□□□□□ -0.83
COL12A1-209ENST00000493109 NTF4P34130 210 aa9.87□□□□□ -0.83
COL12A1-209ENST00000493109 FCGRTP55899 365 aa9.87□□□□□ -0.83
COL12A1-209ENST00000493109 ANGEL2Q5VTE6 544 aaKnown RBP9.87□□□□□ -0.83
COL12A1-209ENST00000493109 TMEM39AQ9NV64 488 aa9.87□□□□□ -0.83
COL12A1-209ENST00000493109 GPN3Q9UHW5 284 aaPredicted RBP9.87□□□□□ -0.83
COL12A1-209ENST00000493109 MPRIPQ6WCQ1 1025 aa9.86□□□□□ -0.83
COL12A1-209ENST00000493109 DTHD1Q6ZMT9 781 aa9.86□□□□□ -0.83
COL12A1-209ENST00000493109 KSR1Q8IVT5 923 aa9.86□□□□□ -0.83
COL12A1-209ENST00000493109 SULF2Q8IWU5 870 aa9.86□□□□□ -0.83
COL12A1-209ENST00000493109 SPACA3Q8IXA5 215 aa9.86□□□□□ -0.83
COL12A1-209ENST00000493109 RNF214Q8ND24 703 aa9.86□□□□□ -0.83
COL12A1-209ENST00000493109 CITED4Q96RK1 184 aa9.86□□□□□ -0.83
COL12A1-209ENST00000493109 CSRNP1Q96S65 589 aa9.86□□□□□ -0.83
COL12A1-209ENST00000493109 CACNA2D2Q9NY47 1150 aa9.85□□□□□ -0.83
COL12A1-209ENST00000493109 ERVK-24P63145 666 aa9.84□□□□□ -0.83
COL12A1-209ENST00000493109 ZNF252P-AS1Q0IIN9 211 aa9.84□□□□□ -0.83
COL12A1-209ENST00000493109 ARHGAP27Q6ZUM4 889 aa9.84□□□□□ -0.83
COL12A1-209ENST00000493109 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.84□□□□□ -0.83
COL12A1-209ENST00000493109 GPBAR1Q8TDU6 330 aa9.84□□□□□ -0.83
COL12A1-209ENST00000493109 SNX11Q9Y5W9 270 aa9.84□□□□□ -0.83
COL12A1-209ENST00000493109 PKN1Q16512 942 aa9.83□□□□□ -0.84
COL12A1-209ENST00000493109 NKPD1Q17RQ9 610 aa9.83□□□□□ -0.84
COL12A1-209ENST00000493109 ZSWIM9Q86XI8 627 aa9.83□□□□□ -0.84
COL12A1-209ENST00000493109 USTQ9Y2C2 406 aa9.83□□□□□ -0.84
COL12A1-209ENST00000493109 ARNTP27540 789 aa9.82□□□□□ -0.84
COL12A1-209ENST00000493109 MAP1SQ66K74 1059 aaPredicted RBP9.82□□□□□ -0.84
COL12A1-209ENST00000493109 ALKBH8Q96BT7 664 aaKnown RBP9.82□□□□□ -0.84
COL12A1-209ENST00000493109 FAM84AQ96KN4 292 aa9.82□□□□□ -0.84
COL12A1-209ENST00000493109 CTNND2Q9UQB3 1225 aa9.82□□□□□ -0.84
COL12A1-209ENST00000493109 LRRC10BA6NIK2 292 aa9.81□□□□□ -0.84
COL12A1-209ENST00000493109 PPP2R3AQ06190 1150 aa9.81□□□□□ -0.84
COL12A1-209ENST00000493109 FYB2Q5VWT5 728 aa9.81□□□□□ -0.84
COL12A1-209ENST00000493109 TXNDC2Q86VQ3 553 aa9.81□□□□□ -0.84
COL12A1-209ENST00000493109 SSU72Q9NP77 194 aaKnown RBP9.81□□□□□ -0.84
COL12A1-209ENST00000493109 ZP2Q05996 745 aa9.8□□□□□ -0.84
COL12A1-209ENST00000493109 PPM1JQ5JR12 505 aa9.8□□□□□ -0.84
COL12A1-209ENST00000493109 KRTAP4-11Q9BYQ6 195 aa9.8□□□□□ -0.84
COL12A1-209ENST00000493109 BCO2Q9BYV7 579 aa9.8□□□□□ -0.84
COL12A1-209ENST00000493109 IGF2BP3O00425 579 aaKnown RBP eCLIP9.79□□□□□ -0.84
COL12A1-209ENST00000493109 RING1Q06587 406 aa9.79□□□□□ -0.84
COL12A1-209ENST00000493109 IKZF1Q13422 519 aa9.79□□□□□ -0.84
COL12A1-209ENST00000493109 MLANAQ16655 118 aa9.79□□□□□ -0.84
COL12A1-209ENST00000493109 C1QL4Q86Z23 238 aa9.79□□□□□ -0.84
COL12A1-209ENST00000493109 LIN37Q96GY3 246 aaPredicted RBP9.79□□□□□ -0.84
COL12A1-209ENST00000493109 SLC38A3Q99624 504 aa9.79□□□□□ -0.84
COL12A1-209ENST00000493109 RBCK1Q9BYM8 510 aa9.79□□□□□ -0.84
COL12A1-209ENST00000493109 PRDM10Q9NQV6 1147 aa9.79□□□□□ -0.84
COL12A1-209ENST00000493109 CSADQ9Y600 493 aa9.79□□□□□ -0.84
COL12A1-209ENST00000493109 PITPNM2Q9BZ72 1349 aa9.79□□□□□ -0.84
COL12A1-209ENST00000493109 RBAK-RBAKDNI3L0D1 243 aa9.78□□□□□ -0.84
COL12A1-209ENST00000493109 EOMESO95936 686 aa9.78□□□□□ -0.84
COL12A1-209ENST00000493109 NME2P22392 152 aa9.78□□□□□ -0.84
COL12A1-209ENST00000493109 KCNMB1Q16558 191 aa9.78□□□□□ -0.84
COL12A1-209ENST00000493109 BHLHE22Q8NFJ8 381 aaPredicted RBP9.78□□□□□ -0.84
COL12A1-209ENST00000493109 GRIN3AQ8TCU5 1115 aa9.78□□□□□ -0.84
COL12A1-209ENST00000493109 TMC1Q8TDI8 760 aa9.78□□□□□ -0.84
COL12A1-209ENST00000493109 C3orf58Q8NDZ4 430 aa9.77□□□□□ -0.85
COL12A1-209ENST00000493109 ASB11Q8WXH4 323 aa9.77□□□□□ -0.85
COL12A1-209ENST00000493109 DMRTB1Q96MA1 342 aa9.77□□□□□ -0.85
COL12A1-209ENST00000493109 RASIP1Q5U651 963 aa9.76□□□□□ -0.85
COL12A1-209ENST00000493109 B4GALNT3Q6L9W6 998 aa9.76□□□□□ -0.85
COL12A1-209ENST00000493109 NXPE4Q6UWF7 544 aa9.76□□□□□ -0.85
COL12A1-209ENST00000493109 C19orf73Q9NVV2 129 aa9.76□□□□□ -0.85
COL12A1-209ENST00000493109 GTF2IRD1Q9UHL9 959 aa9.76□□□□□ -0.85
COL12A1-209ENST00000493109 AKAP2Q9Y2D5 859 aa9.76□□□□□ -0.85
COL12A1-209ENST00000493109 DCDC2CA8MYV0 355 aa9.75□□□□□ -0.85
COL12A1-209ENST00000493109 XRCC5P13010 732 aaKnown RBP9.75□□□□□ -0.85
COL12A1-209ENST00000493109 BMP6P22004 513 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms