RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SLC51AQ86UW1 340 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 ATP8A2Q9NTI2 1148 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 TACC3Q9Y6A5 838 aa16.47■□□□□ 0.23
PTPN7-216ENST00000492977 DUOX1Q9NRD9 1551 aa16.46■□□□□ 0.23
PTPN7-216ENST00000492977 KRT85P78386 507 aa16.46■□□□□ 0.23
PTPN7-216ENST00000492977 DNM1Q05193 864 aaKnown RBP16.46■□□□□ 0.23
PTPN7-216ENST00000492977 SART3Q15020 963 aaKnown RBP16.46■□□□□ 0.23
PTPN7-216ENST00000492977 TMEM67Q5HYA8 995 aa16.46■□□□□ 0.23
PTPN7-216ENST00000492977 TMTC2Q8N394 836 aa16.46■□□□□ 0.23
PTPN7-216ENST00000492977 RGS22Q8NE09 1264 aa16.46■□□□□ 0.23
PTPN7-216ENST00000492977 NKX2-3Q8TAU0 364 aa16.46■□□□□ 0.23
PTPN7-216ENST00000492977 LY9Q9HBG7 655 aa16.46■□□□□ 0.23
PTPN7-216ENST00000492977 GDPD2Q9HCC8 539 aa16.46■□□□□ 0.23
PTPN7-216ENST00000492977 INCENPQ9NQS7 918 aa16.46■□□□□ 0.23
PTPN7-216ENST00000492977 POLLQ9UGP5 575 aa16.46■□□□□ 0.23
PTPN7-216ENST00000492977 MINDY4BA8MYZ0 360 aa16.45■□□□□ 0.22
PTPN7-216ENST00000492977 CPLX1O14810 134 aa16.45■□□□□ 0.22
PTPN7-216ENST00000492977 IFIT3O14879 490 aaKnown RBP16.45■□□□□ 0.22
PTPN7-216ENST00000492977 LDHCP07864 332 aa16.45■□□□□ 0.22
PTPN7-216ENST00000492977 UBE2HP62256 183 aa16.45■□□□□ 0.22
PTPN7-216ENST00000492977 APOA5Q6Q788 366 aa16.45■□□□□ 0.22
PTPN7-216ENST00000492977 CAMKK2Q96RR4 588 aa16.45■□□□□ 0.22
PTPN7-216ENST00000492977 AATFQ9NY61 560 aaKnown RBP eCLIP16.45■□□□□ 0.22
PTPN7-216ENST00000492977 LTBP1Q14766 1721 aa16.45■□□□□ 0.22
PTPN7-216ENST00000492977 FGRP09769 529 aa16.44■□□□□ 0.22
PTPN7-216ENST00000492977 ZNF445P59923 1031 aa16.44■□□□□ 0.22
PTPN7-216ENST00000492977 CTR9Q6PD62 1173 aa16.44■□□□□ 0.22
PTPN7-216ENST00000492977 NFXL1Q6ZNB6 911 aa16.44■□□□□ 0.22
PTPN7-216ENST00000492977 FERMT3Q86UX7 667 aa16.44■□□□□ 0.22
PTPN7-216ENST00000492977 CERS3Q8IU89 383 aa16.44■□□□□ 0.22
PTPN7-216ENST00000492977 ESR2Q92731 530 aa16.44■□□□□ 0.22
PTPN7-216ENST00000492977 SYAP1Q96A49 352 aaPredicted RBP16.44■□□□□ 0.22
PTPN7-216ENST00000492977 MASTLQ96GX5 879 aa16.44■□□□□ 0.22
PTPN7-216ENST00000492977 GPR101Q96P66 508 aaPredicted RBP16.44■□□□□ 0.22
PTPN7-216ENST00000492977 JAG2Q9Y219 1238 aa16.44■□□□□ 0.22
PTPN7-216ENST00000492977 ERICH2A1L162 156 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 C6orf229H3BNL8 230 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 ZBTB43O43298 467 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 CDKL5O76039 1030 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 FDPSP14324 419 aaKnown RBP16.43■□□□□ 0.22
PTPN7-216ENST00000492977 METAP2P50579 478 aaKnown RBP eCLIP16.43■□□□□ 0.22
PTPN7-216ENST00000492977 RESTQ13127 1097 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 SLC15A2Q16348 729 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 SBK1Q52WX2 424 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 RRP12Q5JTH9 1297 aaKnown RBP16.43■□□□□ 0.22
PTPN7-216ENST00000492977 CPLX2Q6PUV4 134 aaKnown RBP16.43■□□□□ 0.22
PTPN7-216ENST00000492977 TBC1D22AQ8WUA7 517 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 SCAND2PQ9GZW5 306 aaPredicted RBP16.43■□□□□ 0.22
PTPN7-216ENST00000492977 DCP1AQ9NPI6 582 aaPredicted RBP16.43■□□□□ 0.22
PTPN7-216ENST00000492977 TOMM22Q9NS69 142 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 CCDC69A6NI79 296 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 FIBPO43427 364 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 GADD45BO75293 160 aaPredicted RBP16.43■□□□□ 0.22
PTPN7-216ENST00000492977 BAG3O95817 575 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 MRE11P49959 708 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 PPP4CP60510 307 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 ZSCAN23Q3MJ62 389 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 SYNE3Q6ZMZ3 975 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 TMX4Q9H1E5 349 aaPredicted RBP16.43■□□□□ 0.22
PTPN7-216ENST00000492977 STK32BQ9NY57 414 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 ARPP21Q9UBL0 812 aaPredicted RBP16.43■□□□□ 0.22
PTPN7-216ENST00000492977 SLC12A7Q9Y666 1083 aa16.43■□□□□ 0.22
PTPN7-216ENST00000492977 BAZ2AQ9UIF9 1905 aaKnown RBP16.42■□□□□ 0.22
PTPN7-216ENST00000492977 ELP1O95163 1332 aa16.42■□□□□ 0.22
PTPN7-216ENST00000492977 USP17L12C9JPN9 530 aa16.42■□□□□ 0.22
PTPN7-216ENST00000492977 USP17L21D6R901 530 aa16.42■□□□□ 0.22
PTPN7-216ENST00000492977 SLC3A2P08195 630 aaKnown RBP16.42■□□□□ 0.22
PTPN7-216ENST00000492977 RCAN1P53805 252 aa16.42■□□□□ 0.22
PTPN7-216ENST00000492977 WTAPQ15007 396 aa16.42■□□□□ 0.22
PTPN7-216ENST00000492977 EZH2Q15910 746 aaKnown RBP16.42■□□□□ 0.22
PTPN7-216ENST00000492977 NOL10Q9BSC4 688 aaKnown RBP16.42■□□□□ 0.22
PTPN7-216ENST00000492977 COA1Q9GZY4 146 aa16.42■□□□□ 0.22
PTPN7-216ENST00000492977 ORC3Q9UBD5 711 aaPredicted RBP16.42■□□□□ 0.22
PTPN7-216ENST00000492977 NID2Q14112 1375 aa16.42■□□□□ 0.22
PTPN7-216ENST00000492977 FAM205AQ6ZU69 1335 aa16.41■□□□□ 0.22
PTPN7-216ENST00000492977 NT5C2P49902 561 aa16.41■□□□□ 0.22
PTPN7-216ENST00000492977 MSL1Q68DK7 614 aa16.41■□□□□ 0.22
PTPN7-216ENST00000492977 ATL3Q6DD88 541 aa16.41■□□□□ 0.22
PTPN7-216ENST00000492977 SLF2Q8IX21 1173 aa16.41■□□□□ 0.22
PTPN7-216ENST00000492977 MPNDQ8N594 471 aa16.41■□□□□ 0.22
PTPN7-216ENST00000492977 UBAC1Q9BSL1 405 aa16.41■□□□□ 0.22
PTPN7-216ENST00000492977 SENP2Q9HC62 589 aa16.41■□□□□ 0.22
PTPN7-216ENST00000492977 TMEM63CQ9P1W3 806 aa16.41■□□□□ 0.22
PTPN7-216ENST00000492977 QSER1Q2KHR3 1735 aa16.41■□□□□ 0.22
PTPN7-216ENST00000492977 ORC4O43929 436 aa16.4■□□□□ 0.22
PTPN7-216ENST00000492977 EN1Q05925 392 aaPredicted RBP16.4■□□□□ 0.22
PTPN7-216ENST00000492977 STYK1Q6J9G0 422 aa16.4■□□□□ 0.22
PTPN7-216ENST00000492977 FAM163AQ96GL9 167 aaPredicted RBP16.4■□□□□ 0.22
PTPN7-216ENST00000492977 RBM27Q9P2N5 1060 aaKnown RBP16.4■□□□□ 0.22
PTPN7-216ENST00000492977 CFAP45Q9UL16 551 aa16.4■□□□□ 0.22
PTPN7-216ENST00000492977 MROH7-TTC4A0A0A0MT08 1334 aa16.4■□□□□ 0.22
PTPN7-216ENST00000492977 GOLGA8AA7E2F4 631 aa16.39■□□□□ 0.21
PTPN7-216ENST00000492977 ADD1P35611 737 aaKnown RBP16.39■□□□□ 0.21
PTPN7-216ENST00000492977 MICU3Q86XE3 530 aa16.39■□□□□ 0.21
PTPN7-216ENST00000492977 GAS2L3Q86XJ1 694 aa16.39■□□□□ 0.21
PTPN7-216ENST00000492977 RAB11FIP4Q86YS3 637 aa16.39■□□□□ 0.21
PTPN7-216ENST00000492977 FBXO41Q8TF61 875 aa16.39■□□□□ 0.21
PTPN7-216ENST00000492977 C8orf76Q96K31 380 aa16.39■□□□□ 0.21
PTPN7-216ENST00000492977 ZC3H12CQ9C0D7 883 aaKnown RBP16.39■□□□□ 0.21
PTPN7-216ENST00000492977 ANO8Q9HCE9 1232 aaPredicted RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms