RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 MIGA2Q7L4E1 593 aa16.87■□□□□ 0.29
CCM2-217ENST00000492883 EVI5LQ96CN4 794 aa16.87■□□□□ 0.29
CCM2-217ENST00000492883 TRIM6-TRIM34B2RNG4 842 aa16.86■□□□□ 0.29
CCM2-217ENST00000492883 RNF113AO15541 343 aaKnown RBP16.86■□□□□ 0.29
CCM2-217ENST00000492883 CHGBP05060 677 aa16.86■□□□□ 0.29
CCM2-217ENST00000492883 ZFYP08048 801 aaPredicted RBP16.86■□□□□ 0.29
CCM2-217ENST00000492883 DCAF15Q66K64 600 aa16.86■□□□□ 0.29
CCM2-217ENST00000492883 CENPQQ7L2Z9 268 aaPredicted RBP16.86■□□□□ 0.29
CCM2-217ENST00000492883 MAPKAPK5Q8IW41 473 aa16.86■□□□□ 0.29
CCM2-217ENST00000492883 CCDC102AQ96A19 550 aa16.86■□□□□ 0.29
CCM2-217ENST00000492883 CAPNS2Q96L46 248 aa16.86■□□□□ 0.29
CCM2-217ENST00000492883 CSRNP1Q96S65 589 aa16.86■□□□□ 0.29
CCM2-217ENST00000492883 RIOK1Q9BRS2 568 aaKnown RBP16.86■□□□□ 0.29
CCM2-217ENST00000492883 OSBPL5Q9H0X9 879 aaPredicted RBP16.86■□□□□ 0.29
CCM2-217ENST00000492883 OSBPL3Q9H4L5 887 aa16.86■□□□□ 0.29
CCM2-217ENST00000492883 AKAP11Q9UKA4 1901 aa16.86■□□□□ 0.29
CCM2-217ENST00000492883 DDTLA6NHG4 134 aaPredicted RBP16.85■□□□□ 0.29
CCM2-217ENST00000492883 MAP3K11Q16584 847 aa16.85■□□□□ 0.29
CCM2-217ENST00000492883 SH3BP5LQ7L8J4 393 aa16.85■□□□□ 0.29
CCM2-217ENST00000492883 AIDAQ96BJ3 306 aa16.85■□□□□ 0.29
CCM2-217ENST00000492883 CRNKL1Q9BZJ0 848 aaKnown RBP16.85■□□□□ 0.29
CCM2-217ENST00000492883 ARMT1Q9H993 441 aa16.85■□□□□ 0.29
CCM2-217ENST00000492883 WDR33Q9C0J8 1336 aaKnown RBP16.85■□□□□ 0.29
CCM2-217ENST00000492883 RPAP1Q9BWH6 1393 aaPredicted RBP16.85■□□□□ 0.29
CCM2-217ENST00000492883 MBD4O95243 580 aa16.84■□□□□ 0.29
CCM2-217ENST00000492883 PDE4AP27815 886 aa16.84■□□□□ 0.29
CCM2-217ENST00000492883 MAP3K9P80192 1104 aa16.84■□□□□ 0.29
CCM2-217ENST00000492883 LDLRAD1Q5T700 205 aa16.84■□□□□ 0.29
CCM2-217ENST00000492883 LCORLQ8N3X6 602 aa16.84■□□□□ 0.29
CCM2-217ENST00000492883 RILPL2Q969X0 211 aa16.84■□□□□ 0.29
CCM2-217ENST00000492883 SLC10A4Q96EP9 437 aa16.84■□□□□ 0.29
CCM2-217ENST00000492883 ZNF341Q9BYN7 854 aa16.84■□□□□ 0.29
CCM2-217ENST00000492883 DHX36Q9H2U1 1008 aaKnown RBP16.84■□□□□ 0.29
CCM2-217ENST00000492883 RFX7Q2KHR2 1363 aa16.84■□□□□ 0.29
CCM2-217ENST00000492883 SSC5DA1L4H1 1573 aa16.83■□□□□ 0.28
CCM2-217ENST00000492883 FLT1P17948 1338 aa16.83■□□□□ 0.28
CCM2-217ENST00000492883 ANKRD13AQ8IZ07 590 aa16.83■□□□□ 0.28
CCM2-217ENST00000492883 APPBP2Q92624 585 aa16.83■□□□□ 0.28
CCM2-217ENST00000492883 PUS7LQ9H0K6 701 aaKnown RBP16.83■□□□□ 0.28
CCM2-217ENST00000492883 SAP30BPQ9UHR5 308 aaKnown RBP16.83■□□□□ 0.28
CCM2-217ENST00000492883 UNCXA6NJT0 531 aa16.82■□□□□ 0.28
CCM2-217ENST00000492883 ERICH6BQ5W0A0 696 aa16.82■□□□□ 0.28
CCM2-217ENST00000492883 WRNIP1Q96S55 665 aa16.82■□□□□ 0.28
CCM2-217ENST00000492883 PI4KBQ9UBF8 816 aa16.82■□□□□ 0.28
CCM2-217ENST00000492883 PALD1Q9ULE6 856 aa16.82■□□□□ 0.28
CCM2-217ENST00000492883 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.81■□□□□ 0.28
CCM2-217ENST00000492883 SDR42E1Q8WUS8 393 aa16.81■□□□□ 0.28
CCM2-217ENST00000492883 OSBP2Q969R2 916 aa16.81■□□□□ 0.28
CCM2-217ENST00000492883 CLMNQ96JQ2 1002 aa16.81■□□□□ 0.28
CCM2-217ENST00000492883 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.81■□□□□ 0.28
CCM2-217ENST00000492883 CSADQ9Y600 493 aa16.81■□□□□ 0.28
CCM2-217ENST00000492883 SLC4A4Q9Y6R1 1079 aa16.81■□□□□ 0.28
CCM2-217ENST00000492883 POLR2AP24928 1970 aaKnown RBP16.8■□□□□ 0.28
CCM2-217ENST00000492883 MYH2Q9UKX2 1941 aa16.8■□□□□ 0.28
CCM2-217ENST00000492883 ATRNL1Q5VV63 1379 aa16.8■□□□□ 0.28
CCM2-217ENST00000492883 PRKAB2O43741 272 aa16.8■□□□□ 0.28
CCM2-217ENST00000492883 AOC2O75106 756 aa16.8■□□□□ 0.28
CCM2-217ENST00000492883 POLR3DP05423 398 aaPredicted RBP16.8■□□□□ 0.28
CCM2-217ENST00000492883 HLA-DOAP06340 250 aa16.8■□□□□ 0.28
CCM2-217ENST00000492883 SLC10A3P09131 477 aa16.8■□□□□ 0.28
CCM2-217ENST00000492883 NOGQ13253 232 aa16.8■□□□□ 0.28
CCM2-217ENST00000492883 SLC4A8Q2Y0W8 1093 aa16.8■□□□□ 0.28
CCM2-217ENST00000492883 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.8■□□□□ 0.28
CCM2-217ENST00000492883 RASAL3Q86YV0 1011 aa16.8■□□□□ 0.28
CCM2-217ENST00000492883 FOXP4Q8IVH2 680 aaPredicted RBP16.8■□□□□ 0.28
CCM2-217ENST00000492883 CRACR2BQ8N4Y2 399 aaPredicted RBP16.8■□□□□ 0.28
CCM2-217ENST00000492883 DDRGK1Q96HY6 314 aa16.8■□□□□ 0.28
CCM2-217ENST00000492883 TRIM34Q9BYJ4 488 aa16.8■□□□□ 0.28
CCM2-217ENST00000492883 PAPPA2Q9BXP8 1791 aa16.79■□□□□ 0.28
CCM2-217ENST00000492883 FAM155AB1AL88 458 aaPredicted RBP16.79■□□□□ 0.28
CCM2-217ENST00000492883 TBC1D12O60347 775 aa16.79■□□□□ 0.28
CCM2-217ENST00000492883 SLURP2P0DP57 97 aa16.79■□□□□ 0.28
CCM2-217ENST00000492883 MAP2K2P36507 400 aa16.79■□□□□ 0.28
CCM2-217ENST00000492883 MAP3K10Q02779 954 aa16.79■□□□□ 0.28
CCM2-217ENST00000492883 MKRN3Q13064 507 aaKnown RBP16.79■□□□□ 0.28
CCM2-217ENST00000492883 VGLL4Q14135 290 aa16.79■□□□□ 0.28
CCM2-217ENST00000492883 ZMYM1Q5SVZ6 1142 aa16.79■□□□□ 0.28
CCM2-217ENST00000492883 TTC6Q86TZ1 520 aa16.79■□□□□ 0.28
CCM2-217ENST00000492883 ZKSCAN4Q969J2 545 aaPredicted RBP16.79■□□□□ 0.28
CCM2-217ENST00000492883 STRBPQ96SI9 672 aaKnown RBP16.79■□□□□ 0.28
CCM2-217ENST00000492883 SEC62Q99442 399 aaKnown RBP16.79■□□□□ 0.28
CCM2-217ENST00000492883 ELP3Q9H9T3 547 aa16.79■□□□□ 0.28
CCM2-217ENST00000492883 DCP1AQ9NPI6 582 aaPredicted RBP16.79■□□□□ 0.28
CCM2-217ENST00000492883 ATP8A2Q9NTI2 1148 aa16.79■□□□□ 0.28
CCM2-217ENST00000492883 MCM9Q9NXL9 1143 aa16.79■□□□□ 0.28
CCM2-217ENST00000492883 PPP4R2Q9NY27 417 aa16.79■□□□□ 0.28
CCM2-217ENST00000492883 ZNF112Q9UJU3 913 aa16.79■□□□□ 0.28
CCM2-217ENST00000492883 FAM196BA6NMK8 535 aa16.78■□□□□ 0.28
CCM2-217ENST00000492883 M0R2C6 588 aa16.78■□□□□ 0.28
CCM2-217ENST00000492883 GPAA1O43292 621 aa16.78■□□□□ 0.28
CCM2-217ENST00000492883 INPP5BP32019 993 aa16.78■□□□□ 0.28
CCM2-217ENST00000492883 TTC22Q5TAA0 569 aa16.78■□□□□ 0.28
CCM2-217ENST00000492883 TICAM2Q86XR7 235 aa16.78■□□□□ 0.28
CCM2-217ENST00000492883 JMYQ8N9B5 988 aa16.78■□□□□ 0.28
CCM2-217ENST00000492883 HERC5Q9UII4 1024 aaKnown RBP16.78■□□□□ 0.28
CCM2-217ENST00000492883 MAST2Q6P0Q8 1798 aa16.78■□□□□ 0.28
CCM2-217ENST00000492883 TRPM7Q96QT4 1865 aa16.78■□□□□ 0.28
CCM2-217ENST00000492883 ECM29Q5VYK3 1845 aa16.77■□□□□ 0.28
CCM2-217ENST00000492883 APPP05067 770 aa16.77■□□□□ 0.28
CCM2-217ENST00000492883 GNAT2P19087 354 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms