RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 ATG9AQ7Z3C6 839 aa13.73□□□□□ -0.21
SND1-215ENST00000492772 ZGPATQ8N5A5 531 aaKnown RBP13.73□□□□□ -0.21
SND1-215ENST00000492772 DENND2AQ9ULE3 1009 aa13.73□□□□□ -0.21
SND1-215ENST00000492772 A0A1W2PPC1 479 aa13.72□□□□□ -0.21
SND1-215ENST00000492772 PHF20L1A8MW92 1017 aa13.72□□□□□ -0.21
SND1-215ENST00000492772 ZBTB22O15209 634 aa13.72□□□□□ -0.21
SND1-215ENST00000492772 ADCY3O60266 1144 aa13.72□□□□□ -0.21
SND1-215ENST00000492772 CIAO1O76071 339 aa13.72□□□□□ -0.21
SND1-215ENST00000492772 PXYLP1Q8TE99 480 aa13.72□□□□□ -0.21
SND1-215ENST00000492772 IDI2Q9BXS1 227 aa13.72□□□□□ -0.21
SND1-215ENST00000492772 UNC93B1Q9H1C4 597 aa13.72□□□□□ -0.21
SND1-215ENST00000492772 PRO3102Q9H379 93 aa13.72□□□□□ -0.21
SND1-215ENST00000492772 ZHX2Q9Y6X8 837 aa13.72□□□□□ -0.21
SND1-215ENST00000492772 LOC285556D6RIA3 1793 aa13.71□□□□□ -0.21
SND1-215ENST00000492772 GAKO14976 1311 aa13.71□□□□□ -0.21
SND1-215ENST00000492772 TNPO2O14787 897 aaKnown RBP13.71□□□□□ -0.21
SND1-215ENST00000492772 ZBTB7BO15156 539 aaPredicted RBP13.71□□□□□ -0.21
SND1-215ENST00000492772 SGPL1O95470 568 aa13.71□□□□□ -0.21
SND1-215ENST00000492772 PTPRAP18433 802 aa13.71□□□□□ -0.21
SND1-215ENST00000492772 RGS3P49796 1198 aa13.71□□□□□ -0.21
SND1-215ENST00000492772 IRF5Q13568 498 aa13.71□□□□□ -0.21
SND1-215ENST00000492772 GADL1Q6ZQY3 521 aa13.71□□□□□ -0.21
SND1-215ENST00000492772 FAM9BQ8IZU0 186 aa13.71□□□□□ -0.21
SND1-215ENST00000492772 SMCR8Q8TEV9 937 aaPredicted RBP13.71□□□□□ -0.21
SND1-215ENST00000492772 CEP126Q9P2H0 1117 aa13.71□□□□□ -0.21
SND1-215ENST00000492772 GABRQQ9UN88 632 aa13.71□□□□□ -0.21
SND1-215ENST00000492772 AFG3L2Q9Y4W6 797 aa13.71□□□□□ -0.21
SND1-215ENST00000492772 LRRFIP2Q9Y608 721 aaKnown RBP13.71□□□□□ -0.21
SND1-215ENST00000492772 PDS5AQ29RF7 1337 aaKnown RBP13.7□□□□□ -0.22
SND1-215ENST00000492772 INHAP05111 366 aa13.7□□□□□ -0.22
SND1-215ENST00000492772 FLT3LGP49771 235 aa13.7□□□□□ -0.22
SND1-215ENST00000492772 DZIP1Q86YF9 867 aaKnown RBP13.7□□□□□ -0.22
SND1-215ENST00000492772 ZSCAN29Q8IWY8 852 aaPredicted RBP13.7□□□□□ -0.22
SND1-215ENST00000492772 ZFPM1Q8IX07 1006 aa13.7□□□□□ -0.22
SND1-215ENST00000492772 SLF2Q8IX21 1173 aa13.7□□□□□ -0.22
SND1-215ENST00000492772 SSH1Q8WYL5 1049 aa13.7□□□□□ -0.22
SND1-215ENST00000492772 SIL1Q9H173 461 aa13.7□□□□□ -0.22
SND1-215ENST00000492772 EVI5O60447 810 aa13.69□□□□□ -0.22
SND1-215ENST00000492772 CTNND1O60716 968 aaKnown RBP13.69□□□□□ -0.22
SND1-215ENST00000492772 UBTFL1P0CB47 393 aaPredicted RBP13.69□□□□□ -0.22
SND1-215ENST00000492772 ELNP15502 786 aa13.69□□□□□ -0.22
SND1-215ENST00000492772 IL15P40933 162 aaPredicted RBP13.69□□□□□ -0.22
SND1-215ENST00000492772 PHKA1P46020 1223 aa13.69□□□□□ -0.22
SND1-215ENST00000492772 MAP3K10Q02779 954 aa13.69□□□□□ -0.22
SND1-215ENST00000492772 PNMA3Q9UL41 463 aa13.69□□□□□ -0.22
SND1-215ENST00000492772 ATAD5Q96QE3 1844 aa13.69□□□□□ -0.22
SND1-215ENST00000492772 ALPK3Q96L96 1907 aa13.68□□□□□ -0.22
SND1-215ENST00000492772 E9PSI1 815 aa13.68□□□□□ -0.22
SND1-215ENST00000492772 ALDH1L2Q3SY69 923 aa13.68□□□□□ -0.22
SND1-215ENST00000492772 COA7Q96BR5 231 aa13.68□□□□□ -0.22
SND1-215ENST00000492772 PAK6Q9NQU5 681 aaPredicted RBP13.68□□□□□ -0.22
SND1-215ENST00000492772 AGTPBP1Q9UPW5 1226 aa13.68□□□□□ -0.22
SND1-215ENST00000492772 HDAC5Q9UQL6 1122 aa13.68□□□□□ -0.22
SND1-215ENST00000492772 COL2A1P02458 1487 aaPredicted RBP13.67□□□□□ -0.22
SND1-215ENST00000492772 MROH7-TTC4A0A0A0MT08 1334 aa13.67□□□□□ -0.22
SND1-215ENST00000492772 DDTLA6NHG4 134 aaPredicted RBP13.67□□□□□ -0.22
SND1-215ENST00000492772 TRIM75PA6NK02 468 aa13.67□□□□□ -0.22
SND1-215ENST00000492772 TFRCP02786 760 aaKnown RBP13.67□□□□□ -0.22
SND1-215ENST00000492772 FAM110CQ1W6H9 321 aa13.67□□□□□ -0.22
SND1-215ENST00000492772 SPTY2D1Q68D10 685 aaPredicted RBP13.67□□□□□ -0.22
SND1-215ENST00000492772 CCDC102BQ68D86 513 aa13.67□□□□□ -0.22
SND1-215ENST00000492772 SH3BP5LQ7L8J4 393 aa13.67□□□□□ -0.22
SND1-215ENST00000492772 DEFB118Q96PH6 123 aa13.67□□□□□ -0.22
SND1-215ENST00000492772 BTDP43251 543 aa13.66□□□□□ -0.22
SND1-215ENST00000492772 PICALMQ13492 652 aa13.66□□□□□ -0.22
SND1-215ENST00000492772 RASGRF1Q13972 1273 aa13.66□□□□□ -0.22
SND1-215ENST00000492772 PROCA1Q8NCQ7 364 aaPredicted RBP13.66□□□□□ -0.22
SND1-215ENST00000492772 FAM163AQ96GL9 167 aaPredicted RBP13.66□□□□□ -0.22
SND1-215ENST00000492772 TBC1D2Q9BYX2 928 aa13.66□□□□□ -0.22
SND1-215ENST00000492772 CRISPLD2Q9H0B8 497 aa13.66□□□□□ -0.22
SND1-215ENST00000492772 DDX4Q9NQI0 724 aaKnown RBP13.66□□□□□ -0.22
SND1-215ENST00000492772 SMC4Q9NTJ3 1288 aa13.66□□□□□ -0.22
SND1-215ENST00000492772 ABCF2Q9UG63 623 aa13.66□□□□□ -0.22
SND1-215ENST00000492772 TAOK2Q9UL54 1235 aa13.66□□□□□ -0.22
SND1-215ENST00000492772 TBC1D12O60347 775 aa13.65□□□□□ -0.22
SND1-215ENST00000492772 NPM3O75607 178 aaKnown RBP13.65□□□□□ -0.22
SND1-215ENST00000492772 ADORA1P30542 326 aa13.65□□□□□ -0.22
SND1-215ENST00000492772 PABPC4Q13310 644 aaKnown RBP eCLIP13.65□□□□□ -0.22
SND1-215ENST00000492772 NECAB2Q7Z6G3 386 aa13.65□□□□□ -0.22
SND1-215ENST00000492772 ANKRD13CQ8N6S4 541 aa13.65□□□□□ -0.22
SND1-215ENST00000492772 ANKLE1Q8NAG6 615 aa13.65□□□□□ -0.22
SND1-215ENST00000492772 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.65□□□□□ -0.22
SND1-215ENST00000492772 COPRSQ9NQ92 184 aa13.65□□□□□ -0.22
SND1-215ENST00000492772 DDX60LQ5H9U9 1706 aaKnown RBP13.64□□□□□ -0.23
SND1-215ENST00000492772 MAST2Q6P0Q8 1798 aa13.64□□□□□ -0.23
SND1-215ENST00000492772 MAP4K4O95819 1239 aaPredicted RBP13.64□□□□□ -0.23
SND1-215ENST00000492772 HMGCRP04035 888 aa13.64□□□□□ -0.23
SND1-215ENST00000492772 GCLCP48506 637 aaPredicted RBP13.64□□□□□ -0.23
SND1-215ENST00000492772 TREML2Q5T2D2 321 aa13.64□□□□□ -0.23
SND1-215ENST00000492772 PAWRQ96IZ0 340 aaKnown RBP13.64□□□□□ -0.23
SND1-215ENST00000492772 OSBPL5Q9H0X9 879 aaPredicted RBP13.64□□□□□ -0.23
SND1-215ENST00000492772 DOCK3Q8IZD9 2030 aa13.64□□□□□ -0.23
SND1-215ENST00000492772 GPR75-ASB3A0A0A6YYF3 556 aa13.63□□□□□ -0.23
SND1-215ENST00000492772 MVPQ14764 893 aaKnown RBP13.63□□□□□ -0.23
SND1-215ENST00000492772 ERICH6Q7L0X2 663 aa13.63□□□□□ -0.23
SND1-215ENST00000492772 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.63□□□□□ -0.23
SND1-215ENST00000492772 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.63□□□□□ -0.23
SND1-215ENST00000492772 PA2G4Q9UQ80 394 aaKnown RBP13.63□□□□□ -0.23
SND1-215ENST00000492772 AKAP2Q9Y2D5 859 aa13.63□□□□□ -0.23
SND1-215ENST00000492772 A0A1B0GUL7 405 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms