RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 ADGRA1Q86SQ6 560 aa10.93□□□□□ -0.66
COL6A4P1-203ENST00000491915 AACSQ86V21 672 aa10.93□□□□□ -0.66
COL6A4P1-203ENST00000491915 ERO1BQ86YB8 467 aa10.93□□□□□ -0.66
COL6A4P1-203ENST00000491915 SLF2Q8IX21 1173 aa10.93□□□□□ -0.66
COL6A4P1-203ENST00000491915 ANTXR1Q9H6X2 564 aa10.93□□□□□ -0.66
COL6A4P1-203ENST00000491915 CCL15-CCL14A0A0B4J2E2 113 aa10.92□□□□□ -0.66
COL6A4P1-203ENST00000491915 FKTNO75072 461 aa10.92□□□□□ -0.66
COL6A4P1-203ENST00000491915 PPP4CP60510 307 aa10.92□□□□□ -0.66
COL6A4P1-203ENST00000491915 CRHR2Q13324 411 aa10.92□□□□□ -0.66
COL6A4P1-203ENST00000491915 PICALMQ13492 652 aa10.92□□□□□ -0.66
COL6A4P1-203ENST00000491915 PDE3AQ14432 1141 aa10.92□□□□□ -0.66
COL6A4P1-203ENST00000491915 CCL15Q16663 113 aa10.92□□□□□ -0.66
COL6A4P1-203ENST00000491915 NOM1Q5C9Z4 860 aaKnown RBP10.92□□□□□ -0.66
COL6A4P1-203ENST00000491915 CTU1Q7Z7A3 348 aaKnown RBP10.92□□□□□ -0.66
COL6A4P1-203ENST00000491915 FAM43AQ8N2R8 423 aa10.92□□□□□ -0.66
COL6A4P1-203ENST00000491915 SH3RF3Q8TEJ3 882 aaPredicted RBP10.92□□□□□ -0.66
COL6A4P1-203ENST00000491915 HOOK2Q96ED9 719 aa10.92□□□□□ -0.66
COL6A4P1-203ENST00000491915 AK9Q5TCS8 1911 aa10.92□□□□□ -0.66
COL6A4P1-203ENST00000491915 ATRNL1Q5VV63 1379 aa10.91□□□□□ -0.66
COL6A4P1-203ENST00000491915 NPM3O75607 178 aaKnown RBP10.91□□□□□ -0.66
COL6A4P1-203ENST00000491915 ALDH1A1P00352 501 aa10.91□□□□□ -0.66
COL6A4P1-203ENST00000491915 GTF2A2P52657 109 aa10.91□□□□□ -0.66
COL6A4P1-203ENST00000491915 DYNLL1P63167 89 aaKnown RBP10.91□□□□□ -0.66
COL6A4P1-203ENST00000491915 GSTO1P78417 241 aa10.91□□□□□ -0.66
COL6A4P1-203ENST00000491915 RRP1BQ14684 758 aaKnown RBP10.91□□□□□ -0.66
COL6A4P1-203ENST00000491915 NAA16Q6N069 864 aaPredicted RBP10.91□□□□□ -0.66
COL6A4P1-203ENST00000491915 ZSCAN29Q8IWY8 852 aaPredicted RBP10.91□□□□□ -0.66
COL6A4P1-203ENST00000491915 BCL11AQ9H165 835 aa10.91□□□□□ -0.66
COL6A4P1-203ENST00000491915 RFX7Q2KHR2 1363 aa10.9□□□□□ -0.66
COL6A4P1-203ENST00000491915 RPAP1Q9BWH6 1393 aaPredicted RBP10.9□□□□□ -0.66
COL6A4P1-203ENST00000491915 FAM196BA6NMK8 535 aa10.9□□□□□ -0.66
COL6A4P1-203ENST00000491915 BTBD19C9JJ37 291 aa10.9□□□□□ -0.66
COL6A4P1-203ENST00000491915 PPATQ06203 517 aa10.9□□□□□ -0.66
COL6A4P1-203ENST00000491915 PPIL2Q13356 520 aa10.9□□□□□ -0.66
COL6A4P1-203ENST00000491915 MOGSQ13724 837 aa10.9□□□□□ -0.66
COL6A4P1-203ENST00000491915 NOL9Q5SY16 702 aaKnown RBP10.9□□□□□ -0.66
COL6A4P1-203ENST00000491915 OTUD7BQ6GQQ9 843 aa10.9□□□□□ -0.66
COL6A4P1-203ENST00000491915 ERC1Q8IUD2 1116 aa10.9□□□□□ -0.66
COL6A4P1-203ENST00000491915 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.9□□□□□ -0.66
COL6A4P1-203ENST00000491915 AATFQ9NY61 560 aaKnown RBP eCLIP10.9□□□□□ -0.66
COL6A4P1-203ENST00000491915 MYO5AQ9Y4I1 1855 aaKnown RBP10.89□□□□□ -0.67
COL6A4P1-203ENST00000491915 OTOFQ9HC10 1997 aa10.89□□□□□ -0.67
COL6A4P1-203ENST00000491915 SMARCA5O60264 1052 aaPredicted RBP10.89□□□□□ -0.67
COL6A4P1-203ENST00000491915 TBC1D12O60347 775 aa10.89□□□□□ -0.67
COL6A4P1-203ENST00000491915 CETPP11597 493 aa10.89□□□□□ -0.67
COL6A4P1-203ENST00000491915 CYP7A1P22680 504 aa10.89□□□□□ -0.67
COL6A4P1-203ENST00000491915 HSP90AB4PQ58FF6 505 aa10.89□□□□□ -0.67
COL6A4P1-203ENST00000491915 CCDC84Q86UT8 332 aaPredicted RBP10.89□□□□□ -0.67
COL6A4P1-203ENST00000491915 TEX11Q8IYF3 940 aa10.89□□□□□ -0.67
COL6A4P1-203ENST00000491915 TGFBRAP1Q8WUH2 860 aa10.89□□□□□ -0.67
COL6A4P1-203ENST00000491915 KIF1BPQ96EK5 621 aa10.89□□□□□ -0.67
COL6A4P1-203ENST00000491915 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.89□□□□□ -0.67
COL6A4P1-203ENST00000491915 KCNH4Q9UQ05 1017 aa10.89□□□□□ -0.67
COL6A4P1-203ENST00000491915 RAB11FIP3O75154 756 aa10.88□□□□□ -0.67
COL6A4P1-203ENST00000491915 HMMRO75330 724 aa10.88□□□□□ -0.67
COL6A4P1-203ENST00000491915 IDH1O75874 414 aaKnown RBP10.88□□□□□ -0.67
COL6A4P1-203ENST00000491915 MAP4K4O95819 1239 aaPredicted RBP10.88□□□□□ -0.67
COL6A4P1-203ENST00000491915 PTPRAP18433 802 aa10.88□□□□□ -0.67
COL6A4P1-203ENST00000491915 JAG1P78504 1218 aa10.88□□□□□ -0.67
COL6A4P1-203ENST00000491915 SNAPC2Q13487 334 aa10.88□□□□□ -0.67
COL6A4P1-203ENST00000491915 GPAT2Q6NUI2 795 aa10.88□□□□□ -0.67
COL6A4P1-203ENST00000491915 MAPKAPK5Q8IW41 473 aa10.88□□□□□ -0.67
COL6A4P1-203ENST00000491915 MAGEB6Q8N7X4 407 aa10.88□□□□□ -0.67
COL6A4P1-203ENST00000491915 CD99L2Q8TCZ2 262 aa10.88□□□□□ -0.67
COL6A4P1-203ENST00000491915 EDC3Q96F86 508 aaKnown RBP10.88□□□□□ -0.67
COL6A4P1-203ENST00000491915 OSBPL5Q9H0X9 879 aaPredicted RBP10.88□□□□□ -0.67
COL6A4P1-203ENST00000491915 HPS5Q9UPZ3 1129 aa10.88□□□□□ -0.67
COL6A4P1-203ENST00000491915 PCDHB15Q9Y5E8 787 aa10.88□□□□□ -0.67
COL6A4P1-203ENST00000491915 ZHX2Q9Y6X8 837 aa10.88□□□□□ -0.67
COL6A4P1-203ENST00000491915 CTNND1O60716 968 aaKnown RBP10.87□□□□□ -0.67
COL6A4P1-203ENST00000491915 BAG3O95817 575 aa10.87□□□□□ -0.67
COL6A4P1-203ENST00000491915 RGS19P49795 217 aa10.87□□□□□ -0.67
COL6A4P1-203ENST00000491915 SP3Q02447 781 aa10.87□□□□□ -0.67
COL6A4P1-203ENST00000491915 TAF1CQ15572 869 aaPredicted RBP10.87□□□□□ -0.67
COL6A4P1-203ENST00000491915 SLFNL1Q499Z3 407 aa10.87□□□□□ -0.67
COL6A4P1-203ENST00000491915 OTOP1Q7RTM1 612 aa10.87□□□□□ -0.67
COL6A4P1-203ENST00000491915 SCYL3Q8IZE3 742 aa10.87□□□□□ -0.67
COL6A4P1-203ENST00000491915 CLASRPQ8N2M8 674 aaKnown RBP10.87□□□□□ -0.67
COL6A4P1-203ENST00000491915 MIGA1Q8NAN2 632 aa10.87□□□□□ -0.67
COL6A4P1-203ENST00000491915 YTHDC1Q96MU7 727 aaKnown RBP10.87□□□□□ -0.67
COL6A4P1-203ENST00000491915 CHMP4BQ9H444 224 aaKnown RBP10.87□□□□□ -0.67
COL6A4P1-203ENST00000491915 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.87□□□□□ -0.67
COL6A4P1-203ENST00000491915 ZFYVE28Q9HCC9 887 aa10.87□□□□□ -0.67
COL6A4P1-203ENST00000491915 PALD1Q9ULE6 856 aa10.87□□□□□ -0.67
COL6A4P1-203ENST00000491915 AFG3L2Q9Y4W6 797 aa10.87□□□□□ -0.67
COL6A4P1-203ENST00000491915 TRIM17Q9Y577 477 aa10.87□□□□□ -0.67
COL6A4P1-203ENST00000491915 CXCL11O14625 94 aa10.86□□□□□ -0.67
COL6A4P1-203ENST00000491915 CHGBP05060 677 aa10.86□□□□□ -0.67
COL6A4P1-203ENST00000491915 IFIT2P09913 472 aaKnown RBP10.86□□□□□ -0.67
COL6A4P1-203ENST00000491915 PKN2Q16513 984 aaKnown RBP10.86□□□□□ -0.67
COL6A4P1-203ENST00000491915 BOLA2Q9H3K6 86 aa10.86□□□□□ -0.67
COL6A4P1-203ENST00000491915 DCTPP1Q9H773 170 aa10.86□□□□□ -0.67
COL6A4P1-203ENST00000491915 PICK1Q9NRD5 415 aa10.86□□□□□ -0.67
COL6A4P1-203ENST00000491915 SAP30BPQ9UHR5 308 aaKnown RBP10.86□□□□□ -0.67
COL6A4P1-203ENST00000491915 PDHXO00330 501 aa10.85□□□□□ -0.67
COL6A4P1-203ENST00000491915 GOLIM4O00461 696 aa10.85□□□□□ -0.67
COL6A4P1-203ENST00000491915 TLR2O60603 784 aa10.85□□□□□ -0.67
COL6A4P1-203ENST00000491915 PLCG2P16885 1265 aa10.85□□□□□ -0.67
COL6A4P1-203ENST00000491915 ATP5JP18859 108 aa10.85□□□□□ -0.67
COL6A4P1-203ENST00000491915 MAP3K12Q12852 859 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms