RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 GSX1Q9H4S2 264 aaPredicted RBP6.62□□□□□ -1.35
VTA1-204ENST00000491881 WWC3Q9ULE0 1092 aa6.62□□□□□ -1.35
VTA1-204ENST00000491881 ZNF16P17020 682 aaPredicted RBP6.61□□□□□ -1.35
VTA1-204ENST00000491881 RBM25P49756 843 aaKnown RBP6.61□□□□□ -1.35
VTA1-204ENST00000491881 XPCQ01831 940 aaPredicted RBP6.61□□□□□ -1.35
VTA1-204ENST00000491881 LCE4AQ5TA78 99 aa6.61□□□□□ -1.35
VTA1-204ENST00000491881 FAM168AQ92567 244 aa6.61□□□□□ -1.35
VTA1-204ENST00000491881 SETDB2Q96T68 719 aa6.61□□□□□ -1.35
VTA1-204ENST00000491881 TCF12Q99081 682 aa6.61□□□□□ -1.35
VTA1-204ENST00000491881 DUSP9Q99956 384 aaKnown RBP6.61□□□□□ -1.35
VTA1-204ENST00000491881 TRIM56Q9BRZ2 755 aaKnown RBP6.61□□□□□ -1.35
VTA1-204ENST00000491881 RC3H2Q9HBD1 1191 aaKnown RBP6.61□□□□□ -1.35
VTA1-204ENST00000491881 NPHS2Q9NP85 383 aa6.61□□□□□ -1.35
VTA1-204ENST00000491881 GADD45BO75293 160 aaPredicted RBP6.6□□□□□ -1.35
VTA1-204ENST00000491881 B3GALT4O96024 378 aa6.6□□□□□ -1.35
VTA1-204ENST00000491881 FUT4P22083 530 aa6.6□□□□□ -1.35
VTA1-204ENST00000491881 ITGAEP38570 1179 aa6.6□□□□□ -1.35
VTA1-204ENST00000491881 TAGLNQ01995 201 aaKnown RBP6.6□□□□□ -1.35
VTA1-204ENST00000491881 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.6□□□□□ -1.35
VTA1-204ENST00000491881 GALNT12Q8IXK2 581 aa6.6□□□□□ -1.35
VTA1-204ENST00000491881 PLD6Q8N2A8 252 aaKnown RBP6.6□□□□□ -1.35
VTA1-204ENST00000491881 NETO1Q8TDF5 533 aa6.6□□□□□ -1.35
VTA1-204ENST00000491881 EPS8L3Q8TE67 593 aaKnown RBP6.6□□□□□ -1.35
VTA1-204ENST00000491881 MRS2Q9HD23 443 aa6.6□□□□□ -1.35
VTA1-204ENST00000491881 SPG7Q9UQ90 795 aa6.6□□□□□ -1.35
VTA1-204ENST00000491881 FAM87AP0C7U9 286 aa6.59□□□□□ -1.35
VTA1-204ENST00000491881 CD8BP10966 210 aa6.59□□□□□ -1.35
VTA1-204ENST00000491881 PSMD2Q13200 908 aa6.59□□□□□ -1.35
VTA1-204ENST00000491881 FBLN7Q53RD9 439 aa6.59□□□□□ -1.35
VTA1-204ENST00000491881 KSR1Q8IVT5 923 aa6.59□□□□□ -1.35
VTA1-204ENST00000491881 WDR18Q9BV38 432 aa6.59□□□□□ -1.35
VTA1-204ENST00000491881 KRTAP4-2Q9BYR5 136 aa6.59□□□□□ -1.35
VTA1-204ENST00000491881 PARP2Q9UGN5 583 aa6.59□□□□□ -1.35
VTA1-204ENST00000491881 PPP1R9AQ9ULJ8 1098 aa6.59□□□□□ -1.35
VTA1-204ENST00000491881 RNASE1P07998 156 aaKnown RBP6.58□□□□□ -1.36
VTA1-204ENST00000491881 GNA15P30679 374 aa6.58□□□□□ -1.36
VTA1-204ENST00000491881 CDK5R2Q13319 367 aa6.58□□□□□ -1.36
VTA1-204ENST00000491881 FAM181AQ8N9Y4 354 aa6.58□□□□□ -1.36
VTA1-204ENST00000491881 GLIS3Q8NEA6 775 aa6.58□□□□□ -1.36
VTA1-204ENST00000491881 PI4K2BQ8TCG2 481 aa6.58□□□□□ -1.36
VTA1-204ENST00000491881 TMEM40Q8WWA1 233 aa6.58□□□□□ -1.36
VTA1-204ENST00000491881 ZNF428Q96B54 188 aa6.58□□□□□ -1.36
VTA1-204ENST00000491881 SLC38A3Q99624 504 aa6.58□□□□□ -1.36
VTA1-204ENST00000491881 EHD4Q9H223 541 aa6.58□□□□□ -1.36
VTA1-204ENST00000491881 PIDD1Q9HB75 910 aa6.58□□□□□ -1.36
VTA1-204ENST00000491881 SYNGAP1Q96PV0 1343 aa6.57□□□□□ -1.36
VTA1-204ENST00000491881 PRKCQQ04759 706 aa6.57□□□□□ -1.36
VTA1-204ENST00000491881 AP3B2Q13367 1082 aa6.57□□□□□ -1.36
VTA1-204ENST00000491881 PI16Q6UXB8 463 aa6.57□□□□□ -1.36
VTA1-204ENST00000491881 FRMD6Q96NE9 622 aa6.57□□□□□ -1.36
VTA1-204ENST00000491881 ZNF576Q9H609 170 aa6.57□□□□□ -1.36
VTA1-204ENST00000491881 MBNL3Q9NUK0 354 aaKnown RBP6.57□□□□□ -1.36
VTA1-204ENST00000491881 VAV3Q9UKW4 847 aa6.57□□□□□ -1.36
VTA1-204ENST00000491881 TMPRSS2O15393 492 aa6.56□□□□□ -1.36
VTA1-204ENST00000491881 SORBS3O60504 671 aa6.56□□□□□ -1.36
VTA1-204ENST00000491881 SPOCD1Q6ZMY3 1216 aa6.56□□□□□ -1.36
VTA1-204ENST00000491881 ARHGAP27Q6ZUM4 889 aa6.56□□□□□ -1.36
VTA1-204ENST00000491881 NPM2Q86SE8 214 aaKnown RBP6.56□□□□□ -1.36
VTA1-204ENST00000491881 FAM161BQ96MY7 647 aa6.56□□□□□ -1.36
VTA1-204ENST00000491881 PPP4R2Q9NY27 417 aa6.56□□□□□ -1.36
VTA1-204ENST00000491881 ADAMTS6Q9UKP5 1117 aa6.56□□□□□ -1.36
VTA1-204ENST00000491881 TRAK1Q9UPV9 953 aa6.56□□□□□ -1.36
VTA1-204ENST00000491881 GIPC1O14908 333 aa6.55□□□□□ -1.36
VTA1-204ENST00000491881 LIG1P18858 919 aa6.55□□□□□ -1.36
VTA1-204ENST00000491881 EIF4BP23588 611 aaKnown RBP6.55□□□□□ -1.36
VTA1-204ENST00000491881 CD96P40200 585 aa6.55□□□□□ -1.36
VTA1-204ENST00000491881 DAB2P98082 770 aa6.55□□□□□ -1.36
VTA1-204ENST00000491881 IFI16Q16666 785 aaKnown RBP6.55□□□□□ -1.36
VTA1-204ENST00000491881 KIAA0319Q5VV43 1072 aa6.55□□□□□ -1.36
VTA1-204ENST00000491881 TMC4Q7Z404 712 aa6.55□□□□□ -1.36
VTA1-204ENST00000491881 LRRN4CLQ8ND94 238 aa6.55□□□□□ -1.36
VTA1-204ENST00000491881 MRRFQ96E11 262 aaKnown RBP6.55□□□□□ -1.36
VTA1-204ENST00000491881 BCO2Q9BYV7 579 aa6.55□□□□□ -1.36
VTA1-204ENST00000491881 ATXN3LQ9H3M9 355 aa6.55□□□□□ -1.36
VTA1-204ENST00000491881 RNF19AQ9NV58 838 aa6.55□□□□□ -1.36
VTA1-204ENST00000491881 CRIM1Q9NZV1 1036 aa6.55□□□□□ -1.36
VTA1-204ENST00000491881 VTI1BQ9UEU0 232 aa6.55□□□□□ -1.36
VTA1-204ENST00000491881 SLFN14P0C7P3 912 aa6.54□□□□□ -1.36
VTA1-204ENST00000491881 ITPKAP23677 461 aa6.54□□□□□ -1.36
VTA1-204ENST00000491881 GRM2Q14416 872 aa6.54□□□□□ -1.36
VTA1-204ENST00000491881 AOC3Q16853 763 aa6.54□□□□□ -1.36
VTA1-204ENST00000491881 NXPE4Q6UWF7 544 aa6.54□□□□□ -1.36
VTA1-204ENST00000491881 SMYD4Q8IYR2 804 aaPredicted RBP6.54□□□□□ -1.36
VTA1-204ENST00000491881 HRASLS5Q96KN8 279 aa6.54□□□□□ -1.36
VTA1-204ENST00000491881 FANCD2OSQ96PS1 177 aa6.54□□□□□ -1.36
VTA1-204ENST00000491881 SRCIN1Q9C0H9 1055 aa6.54□□□□□ -1.36
VTA1-204ENST00000491881 C12orf49Q9H741 205 aa6.54□□□□□ -1.36
VTA1-204ENST00000491881 UNCXA6NJT0 531 aa6.53□□□□□ -1.36
VTA1-204ENST00000491881 E9PSI1 815 aa6.53□□□□□ -1.36
VTA1-204ENST00000491881 HNRNPUQ00839 825 aaKnown RBP eCLIP6.53□□□□□ -1.36
VTA1-204ENST00000491881 ID3Q02535 119 aa6.53□□□□□ -1.36
VTA1-204ENST00000491881 WDR89Q96FK6 387 aaPredicted RBP6.53□□□□□ -1.36
VTA1-204ENST00000491881 ZC3H12CQ9C0D7 883 aaKnown RBP6.53□□□□□ -1.36
VTA1-204ENST00000491881 MKNK2Q9HBH9 465 aa6.53□□□□□ -1.36
VTA1-204ENST00000491881 AK5Q9Y6K8 562 aa6.53□□□□□ -1.36
VTA1-204ENST00000491881 TMEM265A0A087WTH1 108 aa6.52□□□□□ -1.37
VTA1-204ENST00000491881 RNGTTO60942 597 aaKnown RBP6.52□□□□□ -1.37
VTA1-204ENST00000491881 CEACAM5P06731 702 aa6.52□□□□□ -1.37
VTA1-204ENST00000491881 ANGEL2Q5VTE6 544 aaKnown RBP6.52□□□□□ -1.37
VTA1-204ENST00000491881 FAM84AQ96KN4 292 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms