RNA–Protein interactions for RNA: ENST00000491166.1

TMCO3-208, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2

Gene TMCO3, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-208ENST00000491166 DCAF15Q66K64 600 aa15.35■□□□□ 0.05
TMCO3-208ENST00000491166 SPTY2D1Q68D10 685 aaPredicted RBP15.35■□□□□ 0.05
TMCO3-208ENST00000491166 CEP85Q6P2H3 762 aa15.35■□□□□ 0.05
TMCO3-208ENST00000491166 ZNF341Q9BYN7 854 aa15.35■□□□□ 0.05
TMCO3-208ENST00000491166 DDX4Q9NQI0 724 aaKnown RBP15.35■□□□□ 0.05
TMCO3-208ENST00000491166 TLR7Q9NYK1 1049 aaKnown RBP15.35■□□□□ 0.05
TMCO3-208ENST00000491166 RAI14Q9P0K7 980 aa15.35■□□□□ 0.05
TMCO3-208ENST00000491166 MROH7-TTC4A0A0A0MT08 1334 aa15.35■□□□□ 0.05
TMCO3-208ENST00000491166 PDS5AQ29RF7 1337 aaKnown RBP15.35■□□□□ 0.05
TMCO3-208ENST00000491166 SLC4A8Q2Y0W8 1093 aa15.34■□□□□ 0.05
TMCO3-208ENST00000491166 TTC39AQ5SRH9 613 aa15.34■□□□□ 0.05
TMCO3-208ENST00000491166 ZSCAN29Q8IWY8 852 aaPredicted RBP15.34■□□□□ 0.05
TMCO3-208ENST00000491166 EXOC6BQ9Y2D4 811 aa15.34■□□□□ 0.05
TMCO3-208ENST00000491166 COG6Q9Y2V7 657 aa15.34■□□□□ 0.05
TMCO3-208ENST00000491166 TESPA1A2RU30 521 aaPredicted RBP15.33■□□□□ 0.04
TMCO3-208ENST00000491166 IRF6O14896 467 aa15.33■□□□□ 0.04
TMCO3-208ENST00000491166 ZBTB22O15209 634 aa15.33■□□□□ 0.04
TMCO3-208ENST00000491166 WDHD1O75717 1129 aaPredicted RBP15.33■□□□□ 0.04
TMCO3-208ENST00000491166 SH3BP5LQ7L8J4 393 aa15.33■□□□□ 0.04
TMCO3-208ENST00000491166 ERO1BQ86YB8 467 aa15.33■□□□□ 0.04
TMCO3-208ENST00000491166 FAM43AQ8N2R8 423 aa15.33■□□□□ 0.04
TMCO3-208ENST00000491166 HOOK2Q96ED9 719 aa15.33■□□□□ 0.04
TMCO3-208ENST00000491166 ERO1AQ96HE7 468 aa15.33■□□□□ 0.04
TMCO3-208ENST00000491166 CCDC8Q9H0W5 538 aaPredicted RBP15.33■□□□□ 0.04
TMCO3-208ENST00000491166 BCL11AQ9H165 835 aa15.33■□□□□ 0.04
TMCO3-208ENST00000491166 EFCC1Q9HA90 598 aa15.33■□□□□ 0.04
TMCO3-208ENST00000491166 MYH2Q9UKX2 1941 aa15.33■□□□□ 0.04
TMCO3-208ENST00000491166 DDTLA6NHG4 134 aaPredicted RBP15.32■□□□□ 0.04
TMCO3-208ENST00000491166 UQCRFS1P1P0C7P4 283 aa15.32■□□□□ 0.04
TMCO3-208ENST00000491166 GTF2A2P52657 109 aa15.32■□□□□ 0.04
TMCO3-208ENST00000491166 RHBDL3P58872 404 aa15.32■□□□□ 0.04
TMCO3-208ENST00000491166 TAF1CQ15572 869 aaPredicted RBP15.32■□□□□ 0.04
TMCO3-208ENST00000491166 OTUD7BQ6GQQ9 843 aa15.32■□□□□ 0.04
TMCO3-208ENST00000491166 SLF2Q8IX21 1173 aa15.32■□□□□ 0.04
TMCO3-208ENST00000491166 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.32■□□□□ 0.04
TMCO3-208ENST00000491166 NSUN4Q96CB9 384 aaKnown RBP15.32■□□□□ 0.04
TMCO3-208ENST00000491166 ZNF333Q96JL9 665 aa15.32■□□□□ 0.04
TMCO3-208ENST00000491166 IDI2Q9BXS1 227 aa15.32■□□□□ 0.04
TMCO3-208ENST00000491166 GPR108Q9NPR9 543 aa15.32■□□□□ 0.04
TMCO3-208ENST00000491166 LRP2BPQ9P2M1 347 aa15.32■□□□□ 0.04
TMCO3-208ENST00000491166 DBNLQ9UJU6 430 aaKnown RBP15.32■□□□□ 0.04
TMCO3-208ENST00000491166 NOP58Q9Y2X3 529 aaKnown RBP15.32■□□□□ 0.04
TMCO3-208ENST00000491166 RFX7Q2KHR2 1363 aa15.32■□□□□ 0.04
TMCO3-208ENST00000491166 GPR75-ASB3A0A0A6YYF3 556 aa15.31■□□□□ 0.04
TMCO3-208ENST00000491166 CAP1Q01518 475 aa15.31■□□□□ 0.04
TMCO3-208ENST00000491166 CCDC158Q5M9N0 1113 aa15.31■□□□□ 0.04
TMCO3-208ENST00000491166 DPF3Q92784 378 aa15.31■□□□□ 0.04
TMCO3-208ENST00000491166 EAF2Q96CJ1 260 aaPredicted RBP15.31■□□□□ 0.04
TMCO3-208ENST00000491166 FAM163AQ96GL9 167 aaPredicted RBP15.31■□□□□ 0.04
TMCO3-208ENST00000491166 RCAN3Q9UKA8 241 aa15.31■□□□□ 0.04
TMCO3-208ENST00000491166 FAM196BA6NMK8 535 aa15.3■□□□□ 0.04
TMCO3-208ENST00000491166 APBB1O00213 710 aa15.3■□□□□ 0.04
TMCO3-208ENST00000491166 SOX1O00570 391 aaPredicted RBP15.3■□□□□ 0.04
TMCO3-208ENST00000491166 ENTPD3O75355 529 aa15.3■□□□□ 0.04
TMCO3-208ENST00000491166 ECM2O94769 699 aaPredicted RBP15.3■□□□□ 0.04
TMCO3-208ENST00000491166 ZAP70P43403 619 aa15.3■□□□□ 0.04
TMCO3-208ENST00000491166 PPIL2Q13356 520 aa15.3■□□□□ 0.04
TMCO3-208ENST00000491166 AK9Q5TCS8 1911 aa15.3■□□□□ 0.04
TMCO3-208ENST00000491166 ATRNL1Q5VV63 1379 aa15.3■□□□□ 0.04
TMCO3-208ENST00000491166 LRCH3Q96II8 777 aa15.3■□□□□ 0.04
TMCO3-208ENST00000491166 IL1RAPL2Q9NP60 686 aa15.3■□□□□ 0.04
TMCO3-208ENST00000491166 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.3■□□□□ 0.04
TMCO3-208ENST00000491166 ZNF112Q9UJU3 913 aa15.3■□□□□ 0.04
TMCO3-208ENST00000491166 NDUFB9Q9Y6M9 179 aa15.3■□□□□ 0.04
TMCO3-208ENST00000491166 BTBD19C9JJ37 291 aa15.29■□□□□ 0.04
TMCO3-208ENST00000491166 CYP2E1P05181 493 aaPredicted RBP15.29■□□□□ 0.04
TMCO3-208ENST00000491166 CETPP11597 493 aa15.29■□□□□ 0.04
TMCO3-208ENST00000491166 GSTO1P78417 241 aa15.29■□□□□ 0.04
TMCO3-208ENST00000491166 SNAPC2Q13487 334 aa15.29■□□□□ 0.04
TMCO3-208ENST00000491166 SLC9C1Q4G0N8 1177 aa15.29■□□□□ 0.04
TMCO3-208ENST00000491166 C20orf194Q5TEA3 1177 aa15.29■□□□□ 0.04
TMCO3-208ENST00000491166 AACSQ86V21 672 aa15.29■□□□□ 0.04
TMCO3-208ENST00000491166 PIH1D3Q9NQM4 214 aaKnown RBP15.29■□□□□ 0.04
TMCO3-208ENST00000491166 LAMB1P07942 1786 aa15.29■□□□□ 0.04
TMCO3-208ENST00000491166 PHF20L1A8MW92 1017 aa15.28■□□□□ 0.04
TMCO3-208ENST00000491166 LDHCP07864 332 aa15.28■□□□□ 0.04
TMCO3-208ENST00000491166 PPATQ06203 517 aa15.28■□□□□ 0.04
TMCO3-208ENST00000491166 NAA16Q6N069 864 aaPredicted RBP15.28■□□□□ 0.04
TMCO3-208ENST00000491166 ADGRA1Q86SQ6 560 aa15.28■□□□□ 0.04
TMCO3-208ENST00000491166 CCDC84Q86UT8 332 aaPredicted RBP15.28■□□□□ 0.04
TMCO3-208ENST00000491166 SH3RF3Q8TEJ3 882 aaPredicted RBP15.28■□□□□ 0.04
TMCO3-208ENST00000491166 ZFYVE28Q9HCC9 887 aa15.28■□□□□ 0.04
TMCO3-208ENST00000491166 AATFQ9NY61 560 aaKnown RBP eCLIP15.28■□□□□ 0.04
TMCO3-208ENST00000491166 PTCH2Q9Y6C5 1203 aa15.28■□□□□ 0.04
TMCO3-208ENST00000491166 LAMA3Q16787 3333 aa15.27■□□□□ 0.04
TMCO3-208ENST00000491166 SP3Q02447 781 aa15.27■□□□□ 0.04
TMCO3-208ENST00000491166 NOL9Q5SY16 702 aaKnown RBP15.27■□□□□ 0.04
TMCO3-208ENST00000491166 TEX11Q8IYF3 940 aa15.27■□□□□ 0.04
TMCO3-208ENST00000491166 COL25A1Q9BXS0 654 aaPredicted RBP15.27■□□□□ 0.04
TMCO3-208ENST00000491166 MS4A1P11836 297 aa15.26■□□□□ 0.03
TMCO3-208ENST00000491166 NBPF11Q86T75 865 aa15.26■□□□□ 0.03
TMCO3-208ENST00000491166 SIRT2Q8IXJ6 389 aa15.26■□□□□ 0.03
TMCO3-208ENST00000491166 PICK1Q9NRD5 415 aa15.26■□□□□ 0.03
TMCO3-208ENST00000491166 ZBTB40Q9NUA8 1239 aa15.26■□□□□ 0.03
TMCO3-208ENST00000491166 DDX19BQ9UMR2 479 aa15.26■□□□□ 0.03
TMCO3-208ENST00000491166 DOCK2Q92608 1830 aa15.26■□□□□ 0.03
TMCO3-208ENST00000491166 IDH1O75874 414 aaKnown RBP15.25■□□□□ 0.03
TMCO3-208ENST00000491166 DYNLL1P63167 89 aaKnown RBP15.25■□□□□ 0.03
TMCO3-208ENST00000491166 MAPKAPK5Q8IW41 473 aa15.25■□□□□ 0.03
TMCO3-208ENST00000491166 SCYL3Q8IZE3 742 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms