RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 ZEB1P37275 1124 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-210ENST00000491064 IRF5Q13568 498 aa17.1■□□□□ 0.33
CTDSP1-210ENST00000491064 SCYL3Q8IZE3 742 aa17.1■□□□□ 0.33
CTDSP1-210ENST00000491064 LPIN2Q92539 896 aa17.1■□□□□ 0.33
CTDSP1-210ENST00000491064 DEFB118Q96PH6 123 aa17.1■□□□□ 0.33
CTDSP1-210ENST00000491064 PAK6Q9NQU5 681 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-210ENST00000491064 USP40Q9NVE5 1235 aa17.1■□□□□ 0.33
CTDSP1-210ENST00000491064 STAP2Q9UGK3 403 aa17.1■□□□□ 0.33
CTDSP1-210ENST00000491064 SLC45A1Q9Y2W3 748 aa17.1■□□□□ 0.33
CTDSP1-210ENST00000491064 ZHX2Q9Y6X8 837 aa17.1■□□□□ 0.33
CTDSP1-210ENST00000491064 DOCK1Q14185 1865 aa17.1■□□□□ 0.33
CTDSP1-210ENST00000491064 MYH2Q9UKX2 1941 aa17.09■□□□□ 0.33
CTDSP1-210ENST00000491064 TNPO2O14787 897 aaKnown RBP17.09■□□□□ 0.33
CTDSP1-210ENST00000491064 SLC5A1P13866 664 aa17.09■□□□□ 0.33
CTDSP1-210ENST00000491064 PTPRAP18433 802 aa17.09■□□□□ 0.33
CTDSP1-210ENST00000491064 GADL1Q6ZQY3 521 aa17.09■□□□□ 0.33
CTDSP1-210ENST00000491064 PICK1Q9NRD5 415 aa17.09■□□□□ 0.33
CTDSP1-210ENST00000491064 AFG3L2Q9Y4W6 797 aa17.09■□□□□ 0.33
CTDSP1-210ENST00000491064 EYA2O00167 538 aa17.08■□□□□ 0.32
CTDSP1-210ENST00000491064 RFX5P48382 616 aaPredicted RBP17.08■□□□□ 0.32
CTDSP1-210ENST00000491064 CRISPLD2Q9H0B8 497 aa17.08■□□□□ 0.32
CTDSP1-210ENST00000491064 LDHBP07195 334 aaKnown RBP17.07■□□□□ 0.32
CTDSP1-210ENST00000491064 SMCR8Q8TEV9 937 aaPredicted RBP17.07■□□□□ 0.32
CTDSP1-210ENST00000491064 PAWRQ96IZ0 340 aaKnown RBP17.07■□□□□ 0.32
CTDSP1-210ENST00000491064 IDI2Q9BXS1 227 aa17.07■□□□□ 0.32
CTDSP1-210ENST00000491064 RFX7Q2KHR2 1363 aa17.06■□□□□ 0.32
CTDSP1-210ENST00000491064 SALL1Q9NSC2 1324 aa17.06■□□□□ 0.32
CTDSP1-210ENST00000491064 RGS3P49796 1198 aa17.06■□□□□ 0.32
CTDSP1-210ENST00000491064 MAP3K10Q02779 954 aa17.06■□□□□ 0.32
CTDSP1-210ENST00000491064 SH3BP5LQ7L8J4 393 aa17.06■□□□□ 0.32
CTDSP1-210ENST00000491064 ATG9AQ7Z3C6 839 aa17.06■□□□□ 0.32
CTDSP1-210ENST00000491064 DIS3LQ8TF46 1054 aaKnown RBP17.06■□□□□ 0.32
CTDSP1-210ENST00000491064 USP44Q9H0E7 712 aa17.06■□□□□ 0.32
CTDSP1-210ENST00000491064 MRS2Q9HD23 443 aa17.06■□□□□ 0.32
CTDSP1-210ENST00000491064 TAOK2Q9UL54 1235 aa17.06■□□□□ 0.32
CTDSP1-210ENST00000491064 ENTPD3O75355 529 aa17.05■□□□□ 0.32
CTDSP1-210ENST00000491064 SLURP2P0DP57 97 aa17.05■□□□□ 0.32
CTDSP1-210ENST00000491064 NECAB2Q7Z6G3 386 aa17.05■□□□□ 0.32
CTDSP1-210ENST00000491064 MRPL50Q8N5N7 158 aaKnown RBP17.05■□□□□ 0.32
CTDSP1-210ENST00000491064 COA7Q96BR5 231 aa17.05■□□□□ 0.32
CTDSP1-210ENST00000491064 GDF15Q99988 308 aa17.05■□□□□ 0.32
CTDSP1-210ENST00000491064 LRRFIP2Q9Y608 721 aaKnown RBP17.05■□□□□ 0.32
CTDSP1-210ENST00000491064 UNC80Q8N2C7 3258 aa17.05■□□□□ 0.32
CTDSP1-210ENST00000491064 BMP8BP34820 402 aa17.04■□□□□ 0.32
CTDSP1-210ENST00000491064 ANKRD13CQ8N6S4 541 aa17.04■□□□□ 0.32
CTDSP1-210ENST00000491064 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.04■□□□□ 0.329e-7■□□□□ 11.3
CTDSP1-210ENST00000491064 AGTPBP1Q9UPW5 1226 aa17.04■□□□□ 0.32
CTDSP1-210ENST00000491064 GAKO14976 1311 aa17.03■□□□□ 0.32
CTDSP1-210ENST00000491064 PTPRCP08575 1304 aa17.03■□□□□ 0.32
CTDSP1-210ENST00000491064 DDTLA6NHG4 134 aaPredicted RBP17.03■□□□□ 0.32
CTDSP1-210ENST00000491064 TRIM75PA6NK02 468 aa17.03■□□□□ 0.32
CTDSP1-210ENST00000491064 CTNND1O60716 968 aaKnown RBP17.03■□□□□ 0.32
CTDSP1-210ENST00000491064 MNX1P50219 401 aaPredicted RBP17.03■□□□□ 0.32
CTDSP1-210ENST00000491064 ATP2B3Q16720 1220 aa17.03■□□□□ 0.32
CTDSP1-210ENST00000491064 GPR153Q6NV75 609 aa17.03■□□□□ 0.32
CTDSP1-210ENST00000491064 ZSCAN29Q8IWY8 852 aaPredicted RBP17.03■□□□□ 0.32
CTDSP1-210ENST00000491064 GNL3LQ9NVN8 582 aaKnown RBP17.03■□□□□ 0.32
CTDSP1-210ENST00000491064 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.03■□□□□ 0.32
CTDSP1-210ENST00000491064 DENND2AQ9ULE3 1009 aa17.03■□□□□ 0.32
CTDSP1-210ENST00000491064 LOC285556D6RIA3 1793 aa17.02■□□□□ 0.32
CTDSP1-210ENST00000491064 SEMA3EO15041 775 aa17.02■□□□□ 0.32
CTDSP1-210ENST00000491064 PHKA1P46020 1223 aa17.02■□□□□ 0.32
CTDSP1-210ENST00000491064 FAM110CQ1W6H9 321 aa17.02■□□□□ 0.32
CTDSP1-210ENST00000491064 TREML2Q5T2D2 321 aa17.02■□□□□ 0.32
CTDSP1-210ENST00000491064 CCDC84Q86UT8 332 aaPredicted RBP17.02■□□□□ 0.32
CTDSP1-210ENST00000491064 C7orf61Q8IZ16 206 aa17.02■□□□□ 0.32
CTDSP1-210ENST00000491064 ANKLE1Q8NAG6 615 aa17.02■□□□□ 0.32
CTDSP1-210ENST00000491064 DDX4Q9NQI0 724 aaKnown RBP17.02■□□□□ 0.32
CTDSP1-210ENST00000491064 DDX60LQ5H9U9 1706 aaKnown RBP17.01■□□□□ 0.31
CTDSP1-210ENST00000491064 PNMA3Q9UL41 463 aa17.01■□□□□ 0.31
CTDSP1-210ENST00000491064 ZMYND8Q9ULU4 1186 aaPredicted RBP17.01■□□□□ 0.31
CTDSP1-210ENST00000491064 ZBTB22O15209 634 aa17■□□□□ 0.31
CTDSP1-210ENST00000491064 HMGCRP04035 888 aa17■□□□□ 0.31
CTDSP1-210ENST00000491064 DEFB123Q8N688 67 aa17■□□□□ 0.31
CTDSP1-210ENST00000491064 SIL1Q9H173 461 aa17■□□□□ 0.31
CTDSP1-210ENST00000491064 CEP126Q9P2H0 1117 aa17■□□□□ 0.31
CTDSP1-210ENST00000491064 FBXO3Q9UK99 471 aa17■□□□□ 0.31
CTDSP1-210ENST00000491064 PLXNB2O15031 1838 aa17■□□□□ 0.31
CTDSP1-210ENST00000491064 ATAD5Q96QE3 1844 aa17■□□□□ 0.31
CTDSP1-210ENST00000491064 CIAO1O76071 339 aa16.99■□□□□ 0.31
CTDSP1-210ENST00000491064 TRIM32Q13049 653 aa16.99■□□□□ 0.31
CTDSP1-210ENST00000491064 PICALMQ13492 652 aa16.99■□□□□ 0.31
CTDSP1-210ENST00000491064 LRIT3Q3SXY7 679 aa16.99■□□□□ 0.31
CTDSP1-210ENST00000491064 Q7L0L9 218 aa16.99■□□□□ 0.31
CTDSP1-210ENST00000491064 ZGPATQ8N5A5 531 aaKnown RBP16.99■□□□□ 0.31
CTDSP1-210ENST00000491064 PROCA1Q8NCQ7 364 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-210ENST00000491064 FAM163AQ96GL9 167 aaPredicted RBP16.99■□□□□ 0.31
CTDSP1-210ENST00000491064 NBPF3Q9H094 633 aa16.99■□□□□ 0.31
CTDSP1-210ENST00000491064 GJD2Q9UKL4 321 aa16.99■□□□□ 0.31
CTDSP1-210ENST00000491064 RPTORQ8N122 1335 aa16.98■□□□□ 0.31
CTDSP1-210ENST00000491064 TBC1D12O60347 775 aa16.98■□□□□ 0.31
CTDSP1-210ENST00000491064 SYN1P17600 705 aa16.98■□□□□ 0.31
CTDSP1-210ENST00000491064 BTDP43251 543 aa16.98■□□□□ 0.31
CTDSP1-210ENST00000491064 GCLCP48506 637 aaPredicted RBP16.98■□□□□ 0.31
CTDSP1-210ENST00000491064 DZIP1Q86YF9 867 aaKnown RBP16.98■□□□□ 0.31
CTDSP1-210ENST00000491064 HMX1Q9NP08 348 aaPredicted RBP16.98■□□□□ 0.31
CTDSP1-210ENST00000491064 ADORA1P30542 326 aa16.97■□□□□ 0.31
CTDSP1-210ENST00000491064 MAGEA10P43363 369 aaPredicted RBP16.97■□□□□ 0.31
CTDSP1-210ENST00000491064 SPP2Q13103 211 aa16.97■□□□□ 0.31
CTDSP1-210ENST00000491064 CCDC102BQ68D86 513 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms