RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 CTNNA3Q9UI47 895 aa22.24■■□□□ 1.15
MCF2L-230ENST00000491028 CLRN2A0PK11 232 aa22.23■■□□□ 1.15
MCF2L-230ENST00000491028 ENTPD3O75355 529 aa22.23■■□□□ 1.15
MCF2L-230ENST00000491028 HIRAP54198 1017 aaPredicted RBP22.23■■□□□ 1.15
MCF2L-230ENST00000491028 TNFAIP1Q13829 316 aa22.23■■□□□ 1.15
MCF2L-230ENST00000491028 PNMA8AQ86V59 439 aaPredicted RBP22.23■■□□□ 1.15
MCF2L-230ENST00000491028 MAPKAPK5Q8IW41 473 aa22.23■■□□□ 1.15
MCF2L-230ENST00000491028 USP26Q9BXU7 913 aa22.23■■□□□ 1.15
MCF2L-230ENST00000491028 DDX4Q9NQI0 724 aaKnown RBP22.23■■□□□ 1.15
MCF2L-230ENST00000491028 ARPP21Q9UBL0 812 aaPredicted RBP22.23■■□□□ 1.15
MCF2L-230ENST00000491028 RBM8AQ9Y5S9 174 aaKnown RBP22.23■■□□□ 1.15
MCF2L-230ENST00000491028 PITPNM2Q9BZ72 1349 aa22.23■■□□□ 1.15
MCF2L-230ENST00000491028 FGAP02671 866 aa22.22■■□□□ 1.15
MCF2L-230ENST00000491028 TNNI2P48788 182 aa22.22■■□□□ 1.15
MCF2L-230ENST00000491028 CACNB3P54284 484 aa22.22■■□□□ 1.15
MCF2L-230ENST00000491028 NFIAQ12857 509 aa22.22■■□□□ 1.15
MCF2L-230ENST00000491028 PICALMQ13492 652 aa22.22■■□□□ 1.15
MCF2L-230ENST00000491028 FAM83AQ86UY5 434 aa22.22■■□□□ 1.15
MCF2L-230ENST00000491028 APOBEC3FQ8IUX4 373 aaKnown RBP22.22■■□□□ 1.15
MCF2L-230ENST00000491028 OSBPL5Q9H0X9 879 aaPredicted RBP22.22■■□□□ 1.15
MCF2L-230ENST00000491028 VEZTQ9HBM0 779 aa22.22■■□□□ 1.15
MCF2L-230ENST00000491028 FAM198AQ9UFP1 575 aa22.22■■□□□ 1.15
MCF2L-230ENST00000491028 VEGFAP15692 232 aaPredicted RBP22.21■■□□□ 1.15
MCF2L-230ENST00000491028 MCCP23508 829 aa22.21■■□□□ 1.15
MCF2L-230ENST00000491028 SBK1Q52WX2 424 aa22.21■■□□□ 1.15
MCF2L-230ENST00000491028 AMOTL1Q8IY63 956 aa22.21■■□□□ 1.15
MCF2L-230ENST00000491028 ZC3H15Q8WU90 426 aaKnown RBP22.21■■□□□ 1.15
MCF2L-230ENST00000491028 FAM151AQ8WW52 585 aa22.2■■□□□ 1.14
MCF2L-230ENST00000491028 MCM9Q9NXL9 1143 aa22.2■■□□□ 1.14
MCF2L-230ENST00000491028 GGA3Q9NZ52 723 aa22.2■■□□□ 1.14
MCF2L-230ENST00000491028 ATRNL1Q5VV63 1379 aa22.2■■□□□ 1.14
MCF2L-230ENST00000491028 TCP10L2B9ZVM9 353 aa22.19■■□□□ 1.14
MCF2L-230ENST00000491028 HSPA4P34932 840 aa22.19■■□□□ 1.14
MCF2L-230ENST00000491028 NECTIN1Q15223 517 aa22.19■■□□□ 1.14
MCF2L-230ENST00000491028 IMMTQ16891 758 aaKnown RBP22.19■■□□□ 1.14
MCF2L-230ENST00000491028 ANGEL2Q5VTE6 544 aaKnown RBP22.19■■□□□ 1.14
MCF2L-230ENST00000491028 CTR9Q6PD62 1173 aa22.19■■□□□ 1.14
MCF2L-230ENST00000491028 DHX36Q9H2U1 1008 aaKnown RBP22.19■■□□□ 1.14
MCF2L-230ENST00000491028 RRAGCQ9HB90 399 aa22.19■■□□□ 1.14
MCF2L-230ENST00000491028 ASTN2O75129 1339 aaPredicted RBP22.19■■□□□ 1.14
MCF2L-230ENST00000491028 CNTNAP1P78357 1384 aa22.19■■□□□ 1.14
MCF2L-230ENST00000491028 RNF20Q5VTR2 975 aa22.18■■□□□ 1.14
MCF2L-230ENST00000491028 PGAP2Q9UHJ9 254 aa22.18■■□□□ 1.14
MCF2L-230ENST00000491028 PPP2R3BQ9Y5P8 575 aa22.18■■□□□ 1.14
MCF2L-230ENST00000491028 ROBO3Q96MS0 1386 aa22.17■■□□□ 1.14
MCF2L-230ENST00000491028 USP17L12C9JPN9 530 aa22.17■■□□□ 1.14
MCF2L-230ENST00000491028 USP17L21D6R901 530 aa22.17■■□□□ 1.14
MCF2L-230ENST00000491028 ZNF213O14771 459 aa22.17■■□□□ 1.14
MCF2L-230ENST00000491028 TCP10Q12799 353 aa22.17■■□□□ 1.14
MCF2L-230ENST00000491028 CREB3L3Q68CJ9 461 aa22.17■■□□□ 1.14
MCF2L-230ENST00000491028 TTC6Q86TZ1 520 aa22.17■■□□□ 1.14
MCF2L-230ENST00000491028 ANAPC4Q9UJX5 808 aa22.17■■□□□ 1.14
MCF2L-230ENST00000491028 SIPA1L1O43166 1804 aa22.16■■□□□ 1.14
MCF2L-230ENST00000491028 SLC27A2O14975 620 aa22.16■■□□□ 1.14
MCF2L-230ENST00000491028 POLR3DP05423 398 aaPredicted RBP22.16■■□□□ 1.14
MCF2L-230ENST00000491028 HLA-DOAP06340 250 aa22.16■■□□□ 1.14
MCF2L-230ENST00000491028 EAPPQ56P03 285 aaPredicted RBP22.16■■□□□ 1.14
MCF2L-230ENST00000491028 C12orf60Q5U649 245 aa22.16■■□□□ 1.14
MCF2L-230ENST00000491028 DCPSQ96C86 337 aaKnown RBP22.16■■□□□ 1.14
MCF2L-230ENST00000491028 NMRK2Q9NPI5 230 aa22.16■■□□□ 1.14
MCF2L-230ENST00000491028 SAP30BPQ9UHR5 308 aaKnown RBP22.16■■□□□ 1.14
MCF2L-230ENST00000491028 TAOK2Q9UL54 1235 aa22.16■■□□□ 1.14
MCF2L-230ENST00000491028 CYP21A2P08686 494 aa22.15■■□□□ 1.14
MCF2L-230ENST00000491028 PPARAQ07869 468 aa22.15■■□□□ 1.14
MCF2L-230ENST00000491028 ZFPM1Q8IX07 1006 aa22.15■■□□□ 1.14
MCF2L-230ENST00000491028 KCNB2Q92953 911 aa22.15■■□□□ 1.14
MCF2L-230ENST00000491028 C22orf23Q9BZE7 217 aa22.15■■□□□ 1.14
MCF2L-230ENST00000491028 PALD1Q9ULE6 856 aa22.15■■□□□ 1.14
MCF2L-230ENST00000491028 MINDY4BA8MYZ0 360 aa22.14■■□□□ 1.13
MCF2L-230ENST00000491028 ZKSCAN1P17029 563 aaPredicted RBP22.14■■□□□ 1.13
MCF2L-230ENST00000491028 RBM25P49756 843 aaKnown RBP22.14■■□□□ 1.13
MCF2L-230ENST00000491028 RASA3Q14644 834 aa22.14■■□□□ 1.13
MCF2L-230ENST00000491028 ZSCAN29Q8IWY8 852 aaPredicted RBP22.14■■□□□ 1.13
MCF2L-230ENST00000491028 ZNF526Q8TF50 670 aaPredicted RBP22.14■■□□□ 1.13
MCF2L-230ENST00000491028 DEFB129Q9H1M3 183 aa22.14■■□□□ 1.13
MCF2L-230ENST00000491028 EHD4Q9H223 541 aa22.14■■□□□ 1.13
MCF2L-230ENST00000491028 POLR2AP24928 1970 aaKnown RBP22.13■■□□□ 1.13
MCF2L-230ENST00000491028 SLC3A2P08195 630 aaKnown RBP22.13■■□□□ 1.13
MCF2L-230ENST00000491028 ANAPC15P60006 121 aa22.13■■□□□ 1.13
MCF2L-230ENST00000491028 HAND2P61296 217 aa22.13■■□□□ 1.13
MCF2L-230ENST00000491028 TSGA10IPQ3SY00 556 aa22.13■■□□□ 1.13
MCF2L-230ENST00000491028 SH3BP5LQ7L8J4 393 aa22.13■■□□□ 1.13
MCF2L-230ENST00000491028 SULF1Q8IWU6 871 aa22.13■■□□□ 1.13
MCF2L-230ENST00000491028 TBC1D32Q96NH3 1257 aa22.13■■□□□ 1.13
MCF2L-230ENST00000491028 TMEM39BQ9GZU3 492 aa22.13■■□□□ 1.13
MCF2L-230ENST00000491028 PI4KBQ9UBF8 816 aa22.13■■□□□ 1.13
MCF2L-230ENST00000491028 CYP2D7A0A087X1C5 515 aa22.12■■□□□ 1.13
MCF2L-230ENST00000491028 DDTLA6NHG4 134 aaPredicted RBP22.12■■□□□ 1.13
MCF2L-230ENST00000491028 CYP2D6P10635 497 aa22.12■■□□□ 1.13
MCF2L-230ENST00000491028 PCP11498 1178 aaKnown RBP22.12■■□□□ 1.13
MCF2L-230ENST00000491028 PLCD1P51178 756 aa22.12■■□□□ 1.13
MCF2L-230ENST00000491028 KRT32Q14532 448 aa22.12■■□□□ 1.13
MCF2L-230ENST00000491028 LDHDQ86WU2 507 aa22.12■■□□□ 1.13
MCF2L-230ENST00000491028 CSRNP1Q96S65 589 aa22.12■■□□□ 1.13
MCF2L-230ENST00000491028 RNF41Q9H4P4 317 aaPredicted RBP22.12■■□□□ 1.13
MCF2L-230ENST00000491028 STAG1Q8WVM7 1258 aa22.11■■□□□ 1.13
MCF2L-230ENST00000491028 HOOK2Q96ED9 719 aa22.11■■□□□ 1.13
MCF2L-230ENST00000491028 TEPSINQ96N21 525 aa22.11■■□□□ 1.13
MCF2L-230ENST00000491028 NBPF3Q9H094 633 aa22.11■■□□□ 1.13
MCF2L-230ENST00000491028 GPBP1L1Q9HC44 474 aaPredicted RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms