RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 CCL15Q16663 113 aa38.46■■■■□ 3.75
LDB1-204ENST00000490751 BRI3BPQ8WY22 251 aa38.46■■■■□ 3.75
LDB1-204ENST00000490751 DDX4Q9NQI0 724 aaKnown RBP38.46■■■■□ 3.75
LDB1-204ENST00000490751 ZNF112Q9UJU3 913 aa38.46■■■■□ 3.75
LDB1-204ENST00000490751 ZSCAN29Q8IWY8 852 aaPredicted RBP38.45■■■■□ 3.75
LDB1-204ENST00000490751 MYO5AQ9Y4I1 1855 aaKnown RBP38.45■■■■□ 3.75
LDB1-204ENST00000490751 ATRNL1Q5VV63 1379 aa38.44■■■■□ 3.74
LDB1-204ENST00000490751 SH3BP5LQ7L8J4 393 aa38.44■■■■□ 3.74
LDB1-204ENST00000490751 RPAP2Q8IXW5 612 aaPredicted RBP38.44■■■■□ 3.74
LDB1-204ENST00000490751 CRHR2Q13324 411 aa38.43■■■■□ 3.74
LDB1-204ENST00000490751 CYP2E1P05181 493 aaPredicted RBP38.42■■■■□ 3.74
LDB1-204ENST00000490751 ZAP70P43403 619 aa38.42■■■■□ 3.74
LDB1-204ENST00000490751 PPIL2Q13356 520 aa38.42■■■■□ 3.74
LDB1-204ENST00000490751 HSP90AB4PQ58FF6 505 aa38.42■■■■□ 3.74
LDB1-204ENST00000490751 CHMP4BQ9H444 224 aaKnown RBP38.42■■■■□ 3.74
LDB1-204ENST00000490751 DDTLA6NHG4 134 aaPredicted RBP38.41■■■■□ 3.74
LDB1-204ENST00000490751 IRF6O14896 467 aa38.41■■■■□ 3.74
LDB1-204ENST00000490751 C20orf194Q5TEA3 1177 aa38.41■■■■□ 3.74
LDB1-204ENST00000490751 PPATQ06203 517 aa38.4■■■■□ 3.74
LDB1-204ENST00000490751 AACSQ86V21 672 aa38.4■■■■□ 3.74
LDB1-204ENST00000490751 HMMRO75330 724 aa38.39■■■■□ 3.74
LDB1-204ENST00000490751 MAP4K4O95819 1239 aaPredicted RBP38.39■■■■□ 3.74
LDB1-204ENST00000490751 NAA16Q6N069 864 aaPredicted RBP38.39■■■■□ 3.74
LDB1-204ENST00000490751 SIRT2Q8IXJ6 389 aa38.39■■■■□ 3.74
LDB1-204ENST00000490751 GOLGA6L2Q8N9W4 650 aaPredicted RBP38.39■■■■□ 3.74
LDB1-204ENST00000490751 CETPP11597 493 aa38.38■■■■□ 3.73
LDB1-204ENST00000490751 SNAPC2Q13487 334 aa38.38■■■■□ 3.73
LDB1-204ENST00000490751 PDE3AQ14432 1141 aa38.38■■■■□ 3.73
LDB1-204ENST00000490751 NOL9Q5SY16 702 aaKnown RBP38.38■■■■□ 3.73
LDB1-204ENST00000490751 RHPN1Q8TCX5 695 aa38.38■■■■□ 3.73
LDB1-204ENST00000490751 IL1RAPL2Q9NP60 686 aa38.38■■■■□ 3.73
LDB1-204ENST00000490751 NPM3O75607 178 aaKnown RBP38.37■■■■□ 3.73
LDB1-204ENST00000490751 PKN2Q16513 984 aaKnown RBP38.37■■■■□ 3.73
LDB1-204ENST00000490751 FAM43AQ8N2R8 423 aa38.37■■■■□ 3.73
LDB1-204ENST00000490751 NOL10Q9BSC4 688 aaKnown RBP38.37■■■■□ 3.73
LDB1-204ENST00000490751 PIH1D3Q9NQM4 214 aaKnown RBP38.37■■■■□ 3.73
LDB1-204ENST00000490751 TAF1CQ15572 869 aaPredicted RBP38.36■■■■□ 3.73
LDB1-204ENST00000490751 PHF20L1A8MW92 1017 aa38.35■■■■□ 3.73
LDB1-204ENST00000490751 TEX11Q8IYF3 940 aa38.35■■■■□ 3.73
LDB1-204ENST00000490751 APBB1O00213 710 aa38.34■■■■□ 3.73
LDB1-204ENST00000490751 SLURP2P0DP57 97 aa38.34■■■■□ 3.73
LDB1-204ENST00000490751 MAP3K10Q02779 954 aa38.34■■■■□ 3.73
LDB1-204ENST00000490751 AATFQ9NY61 560 aaKnown RBP eCLIP38.34■■■■□ 3.734e-6■■□□□ 11.7
LDB1-204ENST00000490751 SH3RF3Q8TEJ3 882 aaPredicted RBP38.33■■■■□ 3.73
LDB1-204ENST00000490751 KIF1BPQ96EK5 621 aa38.33■■■■□ 3.73
LDB1-204ENST00000490751 COL2A1P02458 1487 aaPredicted RBP38.33■■■■□ 3.73
LDB1-204ENST00000490751 IGSF3O75054 1194 aa38.32■■■■□ 3.72
LDB1-204ENST00000490751 BAG3O95817 575 aa38.32■■■■□ 3.72
LDB1-204ENST00000490751 ADGRA1Q86SQ6 560 aa38.32■■■■□ 3.72
LDB1-204ENST00000490751 OSBPL5Q9H0X9 879 aaPredicted RBP38.32■■■■□ 3.72
LDB1-204ENST00000490751 ZFYVE28Q9HCC9 887 aa38.32■■■■□ 3.72
LDB1-204ENST00000490751 DOCK1Q14185 1865 aa38.32■■■■□ 3.72
LDB1-204ENST00000490751 CDK5RAP2Q96SN8 1893 aa38.31■■■■□ 3.72
LDB1-204ENST00000490751 BTBD19C9JJ37 291 aa38.31■■■■□ 3.72
LDB1-204ENST00000490751 SCYL3Q8IZE3 742 aa38.31■■■■□ 3.72
LDB1-204ENST00000490751 HPS5Q9UPZ3 1129 aa38.31■■■■□ 3.72
LDB1-204ENST00000490751 KCNH4Q9UQ05 1017 aa38.31■■■■□ 3.72
LDB1-204ENST00000490751 NDUFB9Q9Y6M9 179 aa38.31■■■■□ 3.72
LDB1-204ENST00000490751 CLASRPQ8N2M8 674 aaKnown RBP38.3■■■■□ 3.72
LDB1-204ENST00000490751 ERO1AQ96HE7 468 aa38.3■■■■□ 3.72
LDB1-204ENST00000490751 PPP4CP60510 307 aa38.29■■■■□ 3.72
LDB1-204ENST00000490751 FBXO46Q6PJ61 603 aaPredicted RBP38.29■■■■□ 3.72
LDB1-204ENST00000490751 ZCCHC17Q9NP64 241 aaKnown RBP38.29■■■■□ 3.72
LDB1-204ENST00000490751 FOCADQ5VW36 1801 aa38.28■■■■□ 3.72
LDB1-204ENST00000490751 IDH1O75874 414 aaKnown RBP38.28■■■■□ 3.72
LDB1-204ENST00000490751 PLCG2P16885 1265 aa38.28■■■■□ 3.72
LDB1-204ENST00000490751 SP3Q02447 781 aa38.28■■■■□ 3.72
LDB1-204ENST00000490751 CD99L2Q8TCZ2 262 aa38.28■■■■□ 3.72
LDB1-204ENST00000490751 PICK1Q9NRD5 415 aa38.28■■■■□ 3.72
LDB1-204ENST00000490751 TRIM17Q9Y577 477 aa38.28■■■■□ 3.72
LDB1-204ENST00000490751 RAB11FIP3O75154 756 aa38.27■■■■□ 3.72
LDB1-204ENST00000490751 FAM196BA6NMK8 535 aa38.26■■■■□ 3.72
LDB1-204ENST00000490751 TBC1D12O60347 775 aa38.26■■■■□ 3.72
LDB1-204ENST00000490751 ANTXR1Q9H6X2 564 aa38.26■■■■□ 3.72
LDB1-204ENST00000490751 CYP7A1P22680 504 aa38.25■■■■□ 3.71
LDB1-204ENST00000490751 OTOP1Q7RTM1 612 aa38.25■■■■□ 3.71
LDB1-204ENST00000490751 BCL11AQ9H165 835 aa38.25■■■■□ 3.71
LDB1-204ENST00000490751 XPO5Q9HAV4 1204 aaKnown RBP eCLIP38.25■■■■□ 3.71
LDB1-204ENST00000490751 CTNND1O60716 968 aaKnown RBP38.24■■■■□ 3.71
LDB1-204ENST00000490751 PTPRAP18433 802 aa38.24■■■■□ 3.71
LDB1-204ENST00000490751 ZHX2Q9Y6X8 837 aa38.24■■■■□ 3.71
LDB1-204ENST00000490751 CXCL11O14625 94 aa38.23■■■■□ 3.71
LDB1-204ENST00000490751 IFIT2P09913 472 aaKnown RBP38.23■■■■□ 3.71
LDB1-204ENST00000490751 TGFBRAP1Q8WUH2 860 aa38.23■■■■□ 3.71
LDB1-204ENST00000490751 PHIPQ8WWQ0 1821 aa38.23■■■■□ 3.71
LDB1-204ENST00000490751 SIPA1L1O43166 1804 aa38.22■■■■□ 3.71
LDB1-204ENST00000490751 ANKRD23Q86SG2 305 aa38.22■■■■□ 3.71
LDB1-204ENST00000490751 MAPKAPK5Q8IW41 473 aa38.22■■■■□ 3.71
LDB1-204ENST00000490751 MAGEB6Q8N7X4 407 aa38.22■■■■□ 3.71
LDB1-204ENST00000490751 FLT1P17948 1338 aa38.21■■■■□ 3.71
LDB1-204ENST00000490751 TLR2O60603 784 aa38.21■■■■□ 3.71
LDB1-204ENST00000490751 RGS19P49795 217 aa38.21■■■■□ 3.71
LDB1-204ENST00000490751 DYNLL1P63167 89 aaKnown RBP38.21■■■■□ 3.71
LDB1-204ENST00000490751 MOGSQ13724 837 aa38.21■■■■□ 3.71
LDB1-204ENST00000490751 ATAD5Q96QE3 1844 aa38.21■■■■□ 3.71
LDB1-204ENST00000490751 MAP3K12Q12852 859 aa38.2■■■■□ 3.71
LDB1-204ENST00000490751 PTPRFP10586 1907 aa38.2■■■■□ 3.71
LDB1-204ENST00000490751 SOX10P56693 466 aa38.19■■■■□ 3.7
LDB1-204ENST00000490751 CAP1Q01518 475 aa38.19■■■■□ 3.7
LDB1-204ENST00000490751 MIGA1Q8NAN2 632 aa38.19■■■■□ 3.7
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms