RNA–Protein interactions for RNA: ENST00000490615.1

SHTN1-205, Transcript of shootin 1, humanhuman

TSL 3

Gene SHTN1, Length 358 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-205ENST00000490615 SNAP47Q5SQN1 464 aa6.54□□□□□ -1.36
SHTN1-205ENST00000490615 BNC2Q6ZN30 1099 aaPredicted RBP6.54□□□□□ -1.36
SHTN1-205ENST00000490615 FTSJ3Q8IY81 847 aaKnown RBP6.54□□□□□ -1.36
SHTN1-205ENST00000490615 NME8Q8N427 588 aa6.54□□□□□ -1.36
SHTN1-205ENST00000490615 KLHL23Q8NBE8 558 aa6.54□□□□□ -1.36
SHTN1-205ENST00000490615 GOLM1Q8NBJ4 401 aa6.54□□□□□ -1.36
SHTN1-205ENST00000490615 TRIM11Q96F44 468 aa6.54□□□□□ -1.36
SHTN1-205ENST00000490615 EAF1Q96JC9 268 aaPredicted RBP6.54□□□□□ -1.36
SHTN1-205ENST00000490615 ZC3H12CQ9C0D7 883 aaKnown RBP6.54□□□□□ -1.36
SHTN1-205ENST00000490615 KCNQ5Q9NR82 932 aa6.54□□□□□ -1.36
SHTN1-205ENST00000490615 RB1CC1Q8TDY2 1594 aa6.53□□□□□ -1.36
SHTN1-205ENST00000490615 CYP11A1P05108 521 aa6.53□□□□□ -1.36
SHTN1-205ENST00000490615 GSTP1P09211 210 aaKnown RBP6.53□□□□□ -1.36
SHTN1-205ENST00000490615 HSD3B2P26439 372 aa6.53□□□□□ -1.36
SHTN1-205ENST00000490615 MAOBP27338 520 aa6.53□□□□□ -1.36
SHTN1-205ENST00000490615 GJA8P48165 433 aa6.53□□□□□ -1.36
SHTN1-205ENST00000490615 PTPN11Q06124 597 aaPredicted RBP6.53□□□□□ -1.36
SHTN1-205ENST00000490615 SEPT6Q14141 434 aa6.53□□□□□ -1.36
SHTN1-205ENST00000490615 FAM50AQ14320 339 aaKnown RBP6.53□□□□□ -1.36
SHTN1-205ENST00000490615 SUZ12Q15022 739 aaKnown RBP6.53□□□□□ -1.36
SHTN1-205ENST00000490615 POU4F3Q15319 338 aa6.53□□□□□ -1.36
SHTN1-205ENST00000490615 MAP1SQ66K74 1059 aaPredicted RBP6.53□□□□□ -1.36
SHTN1-205ENST00000490615 LLGL2Q6P1M3 1020 aa6.53□□□□□ -1.36
SHTN1-205ENST00000490615 TRIM42Q8IWZ5 723 aa6.53□□□□□ -1.36
SHTN1-205ENST00000490615 JARID2Q92833 1246 aaPredicted RBP6.53□□□□□ -1.36
SHTN1-205ENST00000490615 GPRASP2Q96D09 838 aa6.53□□□□□ -1.36
SHTN1-205ENST00000490615 NRSN2Q9GZP1 204 aa6.53□□□□□ -1.36
SHTN1-205ENST00000490615 MIR1-1HGQ9H1L0 117 aa6.53□□□□□ -1.36
SHTN1-205ENST00000490615 A0A0A0MRY4 1105 aa6.52□□□□□ -1.37
SHTN1-205ENST00000490615 WIPF1O43516 503 aa6.52□□□□□ -1.37
SHTN1-205ENST00000490615 EIF4EBP3O60516 100 aaPredicted RBP6.52□□□□□ -1.37
SHTN1-205ENST00000490615 ADAM11O75078 769 aa6.52□□□□□ -1.37
SHTN1-205ENST00000490615 F13A1P00488 732 aa6.52□□□□□ -1.37
SHTN1-205ENST00000490615 CTSBP07858 339 aa6.52□□□□□ -1.37
SHTN1-205ENST00000490615 IBSPP21815 317 aaPredicted RBP6.52□□□□□ -1.37
SHTN1-205ENST00000490615 LORP23490 312 aaPredicted RBP6.52□□□□□ -1.37
SHTN1-205ENST00000490615 CD68P34810 354 aaPredicted RBP6.52□□□□□ -1.37
SHTN1-205ENST00000490615 DEKP35659 375 aaKnown RBP6.52□□□□□ -1.37
SHTN1-205ENST00000490615 NLRP12P59046 1061 aa6.52□□□□□ -1.37
SHTN1-205ENST00000490615 NFE2L2Q16236 605 aa6.52□□□□□ -1.37
SHTN1-205ENST00000490615 MAP4K3Q8IVH8 894 aa6.52□□□□□ -1.37
SHTN1-205ENST00000490615 DTWD1Q8N5C7 304 aa6.52□□□□□ -1.37
SHTN1-205ENST00000490615 YTHDC1Q96MU7 727 aaKnown RBP6.52□□□□□ -1.37
SHTN1-205ENST00000490615 CORO1BQ9BR76 489 aa6.52□□□□□ -1.37
SHTN1-205ENST00000490615 PLVAPQ9BX97 442 aa6.52□□□□□ -1.37
SHTN1-205ENST00000490615 NT5C1AQ9BXI3 368 aa6.52□□□□□ -1.37
SHTN1-205ENST00000490615 TERF2IPQ9NYB0 399 aa6.52□□□□□ -1.37
SHTN1-205ENST00000490615 KCNK4Q9NYG8 393 aa6.52□□□□□ -1.37
SHTN1-205ENST00000490615 UBP1Q9NZI7 540 aa6.52□□□□□ -1.37
SHTN1-205ENST00000490615 SUPT16HQ9Y5B9 1047 aaKnown RBP6.52□□□□□ -1.37
SHTN1-205ENST00000490615 K7ELQ4 463 aaPredicted RBP6.51□□□□□ -1.37
SHTN1-205ENST00000490615 FOXD4L6Q3SYB3 417 aaPredicted RBP6.51□□□□□ -1.37
SHTN1-205ENST00000490615 FOXD4L3Q6VB84 417 aaPredicted RBP6.51□□□□□ -1.37
SHTN1-205ENST00000490615 CCDC84Q86UT8 332 aaPredicted RBP6.51□□□□□ -1.37
SHTN1-205ENST00000490615 FBXO11Q86XK2 927 aa6.51□□□□□ -1.37
SHTN1-205ENST00000490615 FBXO27Q8NI29 283 aa6.51□□□□□ -1.37
SHTN1-205ENST00000490615 GAL3ST3Q96A11 431 aa6.51□□□□□ -1.37
SHTN1-205ENST00000490615 MRFAP1L1Q96HT8 127 aa6.51□□□□□ -1.37
SHTN1-205ENST00000490615 USP26Q9BXU7 913 aa6.51□□□□□ -1.37
SHTN1-205ENST00000490615 CCDC86Q9H6F5 360 aaKnown RBP6.51□□□□□ -1.37
SHTN1-205ENST00000490615 METTL14Q9HCE5 456 aaKnown RBP6.51□□□□□ -1.37
SHTN1-205ENST00000490615 NOP58Q9Y2X3 529 aaKnown RBP6.51□□□□□ -1.37
SHTN1-205ENST00000490615 FAM221AA4D161 298 aa6.5□□□□□ -1.37
SHTN1-205ENST00000490615 FAM229AH3BQW9 127 aa6.5□□□□□ -1.37
SHTN1-205ENST00000490615 DLL1O00548 723 aa6.5□□□□□ -1.37
SHTN1-205ENST00000490615 TLR3O15455 904 aaKnown RBP6.5□□□□□ -1.37
SHTN1-205ENST00000490615 TRIM37O94972 964 aa6.5□□□□□ -1.37
SHTN1-205ENST00000490615 DLGAP3O95886 979 aa6.5□□□□□ -1.37
SHTN1-205ENST00000490615 CRKP46108 304 aa6.5□□□□□ -1.37
SHTN1-205ENST00000490615 RAC1P63000 192 aa6.5□□□□□ -1.37
SHTN1-205ENST00000490615 FAM196AQ6ZSG2 479 aa6.5□□□□□ -1.37
SHTN1-205ENST00000490615 FMR1NBQ8N0W7 255 aaPredicted RBP6.5□□□□□ -1.37
SHTN1-205ENST00000490615 RASGRP4Q8TDF6 673 aa6.5□□□□□ -1.37
SHTN1-205ENST00000490615 GPBAR1Q8TDU6 330 aa6.5□□□□□ -1.37
SHTN1-205ENST00000490615 BRINP2Q9C0B6 783 aa6.5□□□□□ -1.37
SHTN1-205ENST00000490615 CACNA2D2Q9NY47 1150 aa6.5□□□□□ -1.37
SHTN1-205ENST00000490615 KLHL42Q9P2K6 505 aa6.5□□□□□ -1.37
SHTN1-205ENST00000490615 MKL2Q9ULH7 1088 aa6.5□□□□□ -1.37
SHTN1-205ENST00000490615 LOC100289279A0A1B0GTE1 492 aa6.49□□□□□ -1.37
SHTN1-205ENST00000490615 GNB5O14775 395 aa6.49□□□□□ -1.37
SHTN1-205ENST00000490615 ZNF862O60290 1169 aa6.49□□□□□ -1.37
SHTN1-205ENST00000490615 LIG1P18858 919 aa6.49□□□□□ -1.37
SHTN1-205ENST00000490615 APOBRQ0VD83 1088 aa6.49□□□□□ -1.37
SHTN1-205ENST00000490615 SERINC3Q13530 473 aa6.49□□□□□ -1.37
SHTN1-205ENST00000490615 PDE3AQ14432 1141 aa6.49□□□□□ -1.37
SHTN1-205ENST00000490615 RNF187Q5TA31 235 aaPredicted RBP6.49□□□□□ -1.37
SHTN1-205ENST00000490615 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.49□□□□□ -1.37
SHTN1-205ENST00000490615 CKAP2LQ8IYA6 745 aa6.49□□□□□ -1.37
SHTN1-205ENST00000490615 GATAD2BQ8WXI9 593 aa6.49□□□□□ -1.37
SHTN1-205ENST00000490615 WDR89Q96FK6 387 aaPredicted RBP6.49□□□□□ -1.37
SHTN1-205ENST00000490615 KRT82Q9NSB4 513 aa6.49□□□□□ -1.37
SHTN1-205ENST00000490615 RSF1Q96T23 1441 aaPredicted RBP6.49□□□□□ -1.37
SHTN1-205ENST00000490615 CNTNAP5Q8WYK1 1306 aa6.49□□□□□ -1.37
SHTN1-205ENST00000490615 ROBO2Q9HCK4 1378 aa6.48□□□□□ -1.37
SHTN1-205ENST00000490615 CILPO75339 1184 aa6.48□□□□□ -1.37
SHTN1-205ENST00000490615 WISP1O95388 367 aa6.48□□□□□ -1.37
SHTN1-205ENST00000490615 CDK8P49336 464 aa6.48□□□□□ -1.37
SHTN1-205ENST00000490615 TRIM28Q13263 835 aaKnown RBP6.48□□□□□ -1.37
SHTN1-205ENST00000490615 OS9Q13438 667 aaPredicted RBP6.48□□□□□ -1.37
SHTN1-205ENST00000490615 SEZ6Q53EL9 994 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms