RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 PCDHGC5Q9Y5F6 944 aa7.47□□□□□ -1.21
PRPF4B-207ENST00000490399 SLFN14P0C7P3 912 aa7.46□□□□□ -1.22
PRPF4B-207ENST00000490399 TCF3P15923 654 aa7.46□□□□□ -1.22
PRPF4B-207ENST00000490399 CAMK2GQ13555 558 aaPredicted RBP7.46□□□□□ -1.22
PRPF4B-207ENST00000490399 BNC2Q6ZN30 1099 aaPredicted RBP7.46□□□□□ -1.22
PRPF4B-207ENST00000490399 USP48Q86UV5 1035 aa7.46□□□□□ -1.22
PRPF4B-207ENST00000490399 NT5DC4Q86YG4 428 aa7.46□□□□□ -1.22
PRPF4B-207ENST00000490399 ARMC10Q8N2F6 343 aa7.46□□□□□ -1.22
PRPF4B-207ENST00000490399 C2CD4AQ8NCU7 369 aaPredicted RBP7.46□□□□□ -1.22
PRPF4B-207ENST00000490399 CEP41Q9BYV8 373 aa7.46□□□□□ -1.22
PRPF4B-207ENST00000490399 MIR1-1HGQ9H1L0 117 aa7.46□□□□□ -1.22
PRPF4B-207ENST00000490399 TMPRSS2O15393 492 aa7.45□□□□□ -1.22
PRPF4B-207ENST00000490399 HYAL3O43820 417 aaPredicted RBP7.45□□□□□ -1.22
PRPF4B-207ENST00000490399 RACK1P63244 317 aaKnown RBP7.45□□□□□ -1.22
PRPF4B-207ENST00000490399 LMNB2Q03252 620 aa7.45□□□□□ -1.22
PRPF4B-207ENST00000490399 PWP1Q13610 501 aa7.45□□□□□ -1.22
PRPF4B-207ENST00000490399 INPP5AQ14642 412 aa7.45□□□□□ -1.22
PRPF4B-207ENST00000490399 NPM2Q86SE8 214 aaKnown RBP7.45□□□□□ -1.22
PRPF4B-207ENST00000490399 NBPF11Q86T75 865 aa7.45□□□□□ -1.22
PRPF4B-207ENST00000490399 C12orf40Q86WS4 652 aa7.45□□□□□ -1.22
PRPF4B-207ENST00000490399 FAM46AQ96IP4 442 aaKnown RBP7.45□□□□□ -1.22
PRPF4B-207ENST00000490399 ADAMTS1Q9UHI8 967 aa7.45□□□□□ -1.22
PRPF4B-207ENST00000490399 ACTL7BQ9Y614 415 aa7.45□□□□□ -1.22
PRPF4B-207ENST00000490399 GAS2O43903 313 aaKnown RBP7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 F13A1P00488 732 aa7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 GARTP22102 1010 aa7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 EIF4A3P38919 411 aaKnown RBP7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 ID3Q02535 119 aa7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 SGO2Q562F6 1265 aa7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 ZC3H12AQ5D1E8 599 aaKnown RBP7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 FBXL19Q6PCT2 694 aa7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 LRFN4Q6PJG9 635 aa7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 TRIM42Q8IWZ5 723 aa7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 GOLM1Q8NBJ4 401 aa7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 FBXO27Q8NI29 283 aa7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 UTP4Q969X6 686 aaKnown RBP7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 PLPPR2Q96GM1 343 aa7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 DISC1Q9NRI5 854 aa7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 FAM105AQ9NUU6 356 aa7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 CRIM1Q9NZV1 1036 aa7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 RNF112Q9ULX5 631 aa7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 RAXQ9Y2V3 346 aa7.44□□□□□ -1.22
PRPF4B-207ENST00000490399 DHX15O43143 795 aaKnown RBP7.43□□□□□ -1.22
PRPF4B-207ENST00000490399 BMP3P12645 472 aa7.43□□□□□ -1.22
PRPF4B-207ENST00000490399 ASPAP45381 313 aa7.43□□□□□ -1.22
PRPF4B-207ENST00000490399 PPM1JQ5JR12 505 aa7.43□□□□□ -1.22
PRPF4B-207ENST00000490399 SNAP47Q5SQN1 464 aa7.43□□□□□ -1.22
PRPF4B-207ENST00000490399 CDPF1Q6NVV7 123 aa7.43□□□□□ -1.22
PRPF4B-207ENST00000490399 FBLIM1Q8WUP2 373 aa7.43□□□□□ -1.22
PRPF4B-207ENST00000490399 FANCD2OSQ96PS1 177 aa7.43□□□□□ -1.22
PRPF4B-207ENST00000490399 DDX41Q9UJV9 622 aaKnown RBP7.43□□□□□ -1.22
PRPF4B-207ENST00000490399 TLR3O15455 904 aaKnown RBP7.42□□□□□ -1.22
PRPF4B-207ENST00000490399 HCLS1P14317 486 aaPredicted RBP7.42□□□□□ -1.22
PRPF4B-207ENST00000490399 RAB6AP20340 208 aa7.42□□□□□ -1.22
PRPF4B-207ENST00000490399 USP11P51784 963 aa7.42□□□□□ -1.22
PRPF4B-207ENST00000490399 WIPI1Q5MNZ9 446 aaPredicted RBP7.42□□□□□ -1.22
PRPF4B-207ENST00000490399 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.42□□□□□ -1.22
PRPF4B-207ENST00000490399 ZNF296Q8WUU4 475 aaPredicted RBP7.42□□□□□ -1.22
PRPF4B-207ENST00000490399 ELMO3Q96BJ8 720 aa7.42□□□□□ -1.22
PRPF4B-207ENST00000490399 MYRFLQ96LU7 910 aa7.42□□□□□ -1.22
PRPF4B-207ENST00000490399 IGSF5Q9NSI5 407 aa7.42□□□□□ -1.22
PRPF4B-207ENST00000490399 HIF3AQ9Y2N7 669 aa7.42□□□□□ -1.22
PRPF4B-207ENST00000490399 FAM221AA4D161 298 aa7.41□□□□□ -1.22
PRPF4B-207ENST00000490399 RXRBP28702 533 aa7.41□□□□□ -1.22
PRPF4B-207ENST00000490399 RAD51AP2Q09MP3 1159 aa7.41□□□□□ -1.22
PRPF4B-207ENST00000490399 TTLL4Q14679 1199 aa7.41□□□□□ -1.22
PRPF4B-207ENST00000490399 UVSSAQ2YD98 709 aa7.41□□□□□ -1.22
PRPF4B-207ENST00000490399 SCARA3Q6AZY7 606 aa7.41□□□□□ -1.22
PRPF4B-207ENST00000490399 GATAD2BQ8WXI9 593 aa7.41□□□□□ -1.22
PRPF4B-207ENST00000490399 KCNF1Q9H3M0 494 aa7.41□□□□□ -1.22
PRPF4B-207ENST00000490399 LGR6Q9HBX8 967 aa7.41□□□□□ -1.22
PRPF4B-207ENST00000490399 UBP1Q9NZI7 540 aa7.41□□□□□ -1.22
PRPF4B-207ENST00000490399 STOML1Q9UBI4 398 aa7.41□□□□□ -1.22
PRPF4B-207ENST00000490399 SYNGAP1Q96PV0 1343 aa7.41□□□□□ -1.22
PRPF4B-207ENST00000490399 PRAMEF27A3QJZ7 478 aa7.4□□□□□ -1.22
PRPF4B-207ENST00000490399 RNGTTO60942 597 aaKnown RBP7.4□□□□□ -1.22
PRPF4B-207ENST00000490399 NEFMP07197 916 aa7.4□□□□□ -1.22
PRPF4B-207ENST00000490399 ERCC5P28715 1186 aaPredicted RBP7.4□□□□□ -1.22
PRPF4B-207ENST00000490399 SSTR4P31391 388 aa7.4□□□□□ -1.22
PRPF4B-207ENST00000490399 CRKP46108 304 aa7.4□□□□□ -1.22
PRPF4B-207ENST00000490399 HNRNPUQ00839 825 aaKnown RBP eCLIP7.4□□□□□ -1.22
PRPF4B-207ENST00000490399 FAM20CQ8IXL6 584 aa7.4□□□□□ -1.22
PRPF4B-207ENST00000490399 SPON2Q9BUD6 331 aa7.4□□□□□ -1.22
PRPF4B-207ENST00000490399 PICK1Q9NRD5 415 aa7.4□□□□□ -1.22
PRPF4B-207ENST00000490399 GFRA2O00451 464 aa7.39□□□□□ -1.23
PRPF4B-207ENST00000490399 GREM1O60565 184 aa7.39□□□□□ -1.23
PRPF4B-207ENST00000490399 CILPO75339 1184 aa7.39□□□□□ -1.23
PRPF4B-207ENST00000490399 IGLV1-40P01703 118 aa7.39□□□□□ -1.23
PRPF4B-207ENST00000490399 NFICP08651 508 aa7.39□□□□□ -1.23
PRPF4B-207ENST00000490399 MAP4P27816 1152 aaKnown RBP7.39□□□□□ -1.23
PRPF4B-207ENST00000490399 ERVK-24P63145 666 aa7.39□□□□□ -1.23
PRPF4B-207ENST00000490399 FAM196AQ6ZSG2 479 aa7.39□□□□□ -1.23
PRPF4B-207ENST00000490399 BEND4Q6ZU67 534 aa7.39□□□□□ -1.23
PRPF4B-207ENST00000490399 HDXQ7Z353 690 aa7.39□□□□□ -1.23
PRPF4B-207ENST00000490399 UBE3DQ7Z6J8 389 aa7.39□□□□□ -1.23
PRPF4B-207ENST00000490399 CCDC84Q86UT8 332 aaPredicted RBP7.39□□□□□ -1.23
PRPF4B-207ENST00000490399 KIAA0825Q8IV33 1275 aa7.39□□□□□ -1.23
PRPF4B-207ENST00000490399 ZNF654Q8IZM8 581 aa7.39□□□□□ -1.23
PRPF4B-207ENST00000490399 EAF1Q96JC9 268 aaPredicted RBP7.39□□□□□ -1.23
PRPF4B-207ENST00000490399 ATXN3LQ9H3M9 355 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms