RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 MAP3K12Q12852 859 aa20.65■□□□□ 0.9
RAPGEF3-212ENST00000490387 EVI5LQ96CN4 794 aa20.65■□□□□ 0.9
RAPGEF3-212ENST00000490387 TCRBV5S4A2TA0A5A2 114 aa20.64■□□□□ 0.89
RAPGEF3-212ENST00000490387 PDE6AP16499 860 aa20.64■□□□□ 0.89
RAPGEF3-212ENST00000490387 IREB2P48200 963 aaKnown RBP20.64■□□□□ 0.89
RAPGEF3-212ENST00000490387 SREBF2Q12772 1141 aa20.64■□□□□ 0.89
RAPGEF3-212ENST00000490387 SLC10A4Q96EP9 437 aa20.64■□□□□ 0.89
RAPGEF3-212ENST00000490387 ZDHHC15Q96MV8 337 aa20.64■□□□□ 0.89
RAPGEF3-212ENST00000490387 DAGLAQ9Y4D2 1042 aa20.64■□□□□ 0.89
RAPGEF3-212ENST00000490387 OTOFQ9HC10 1997 aa20.63■□□□□ 0.89
RAPGEF3-212ENST00000490387 RFX7Q2KHR2 1363 aa20.63■□□□□ 0.89
RAPGEF3-212ENST00000490387 MROH7-TTC4A0A0A0MT08 1334 aa20.63■□□□□ 0.89
RAPGEF3-212ENST00000490387 SPRYD7Q5W111 196 aa20.63■□□□□ 0.89
RAPGEF3-212ENST00000490387 ADGRA1Q86SQ6 560 aa20.63■□□□□ 0.89
RAPGEF3-212ENST00000490387 TICAM2Q86XR7 235 aa20.63■□□□□ 0.89
RAPGEF3-212ENST00000490387 MAGEB6Q8N7X4 407 aa20.63■□□□□ 0.89
RAPGEF3-212ENST00000490387 MCOLN1Q9GZU1 580 aa20.63■□□□□ 0.89
RAPGEF3-212ENST00000490387 TMOD2Q9NZR1 351 aa20.63■□□□□ 0.89
RAPGEF3-212ENST00000490387 CHGBP05060 677 aa20.62■□□□□ 0.89
RAPGEF3-212ENST00000490387 ADD2P35612 726 aa20.62■□□□□ 0.89
RAPGEF3-212ENST00000490387 TM4SF4P48230 202 aa20.62■□□□□ 0.89
RAPGEF3-212ENST00000490387 GSTO1P78417 241 aa20.62■□□□□ 0.89
RAPGEF3-212ENST00000490387 DGKZQ13574 1117 aa20.62■□□□□ 0.89
RAPGEF3-212ENST00000490387 SLC9C2Q5TAH2 1124 aa20.62■□□□□ 0.89
RAPGEF3-212ENST00000490387 NAA16Q6N069 864 aaPredicted RBP20.62■□□□□ 0.89
RAPGEF3-212ENST00000490387 APOBEC3HQ6NTF7 200 aaKnown RBP20.62■□□□□ 0.89
RAPGEF3-212ENST00000490387 CLMNQ96JQ2 1002 aa20.62■□□□□ 0.89
RAPGEF3-212ENST00000490387 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.62■□□□□ 0.89
RAPGEF3-212ENST00000490387 UNCXA6NJT0 531 aa20.61■□□□□ 0.89
RAPGEF3-212ENST00000490387 USP2O75604 605 aaPredicted RBP20.61■□□□□ 0.89
RAPGEF3-212ENST00000490387 SDSP20132 328 aa20.61■□□□□ 0.89
RAPGEF3-212ENST00000490387 UBE3CQ15386 1083 aa20.61■□□□□ 0.89
RAPGEF3-212ENST00000490387 BMP2KLQ5H9B9 411 aa20.61■□□□□ 0.89
RAPGEF3-212ENST00000490387 SLF2Q8IX21 1173 aa20.61■□□□□ 0.89
RAPGEF3-212ENST00000490387 FSD1Q9BTV5 496 aa20.61■□□□□ 0.89
RAPGEF3-212ENST00000490387 TMEM39BQ9GZU3 492 aa20.61■□□□□ 0.89
RAPGEF3-212ENST00000490387 ZNF532Q9HCE3 1301 aa20.6■□□□□ 0.89
RAPGEF3-212ENST00000490387 GPR75-ASB3A0A0A6YYF3 556 aa20.6■□□□□ 0.89
RAPGEF3-212ENST00000490387 TRIM6-TRIM34B2RNG4 842 aa20.6■□□□□ 0.89
RAPGEF3-212ENST00000490387 LDHCP07864 332 aa20.6■□□□□ 0.89
RAPGEF3-212ENST00000490387 CACNB3P54284 484 aa20.6■□□□□ 0.89
RAPGEF3-212ENST00000490387 SLFNL1Q499Z3 407 aa20.6■□□□□ 0.89
RAPGEF3-212ENST00000490387 ANKRD13AQ8IZ07 590 aa20.6■□□□□ 0.89
RAPGEF3-212ENST00000490387 WNK4Q96J92 1243 aa20.6■□□□□ 0.89
RAPGEF3-212ENST00000490387 TEPSINQ96N21 525 aa20.6■□□□□ 0.89
RAPGEF3-212ENST00000490387 CDK5RAP2Q96SN8 1893 aa20.6■□□□□ 0.89
RAPGEF3-212ENST00000490387 LAMB1P07942 1786 aa20.59■□□□□ 0.89
RAPGEF3-212ENST00000490387 CCDC85CA6NKD9 419 aa20.59■□□□□ 0.89
RAPGEF3-212ENST00000490387 RNF113AO15541 343 aaKnown RBP20.59■□□□□ 0.89
RAPGEF3-212ENST00000490387 TBC1D8O95759 1140 aa20.59■□□□□ 0.89
RAPGEF3-212ENST00000490387 ZFYP08048 801 aaPredicted RBP20.59■□□□□ 0.89
RAPGEF3-212ENST00000490387 ZBTB48P10074 688 aaPredicted RBP20.59■□□□□ 0.89
RAPGEF3-212ENST00000490387 CYP7A1P22680 504 aa20.59■□□□□ 0.89
RAPGEF3-212ENST00000490387 ZSCAN25Q6NSZ9 544 aa20.59■□□□□ 0.89
RAPGEF3-212ENST00000490387 CDAN1Q8IWY9 1227 aa20.59■□□□□ 0.89
RAPGEF3-212ENST00000490387 FOCADQ5VW36 1801 aa20.58■□□□□ 0.89
RAPGEF3-212ENST00000490387 MANSC4A6NHS7 340 aaPredicted RBP20.58■□□□□ 0.89
RAPGEF3-212ENST00000490387 PPP4CP60510 307 aa20.58■□□□□ 0.89
RAPGEF3-212ENST00000490387 RILPL2Q969X0 211 aa20.58■□□□□ 0.89
RAPGEF3-212ENST00000490387 BTDP43251 543 aa20.57■□□□□ 0.88
RAPGEF3-212ENST00000490387 RHBDL3P58872 404 aa20.57■□□□□ 0.88
RAPGEF3-212ENST00000490387 LRRFIP1Q32MZ4 808 aaKnown RBP20.57■□□□□ 0.88
RAPGEF3-212ENST00000490387 RIOK1Q9BRS2 568 aaKnown RBP20.57■□□□□ 0.88
RAPGEF3-212ENST00000490387 INHBEP58166 350 aa20.56■□□□□ 0.88
RAPGEF3-212ENST00000490387 ZMYM1Q5SVZ6 1142 aa20.56■□□□□ 0.88
RAPGEF3-212ENST00000490387 FKBP1CQ5VVH2 108 aa20.56■□□□□ 0.88
RAPGEF3-212ENST00000490387 CDC42EP5Q6NZY7 148 aa20.56■□□□□ 0.88
RAPGEF3-212ENST00000490387 FAM83AQ86UY5 434 aa20.56■□□□□ 0.88
RAPGEF3-212ENST00000490387 APPBP2Q92624 585 aa20.56■□□□□ 0.88
RAPGEF3-212ENST00000490387 ELP3Q9H9T3 547 aa20.56■□□□□ 0.88
RAPGEF3-212ENST00000490387 ALDH1A1P00352 501 aa20.55■□□□□ 0.88
RAPGEF3-212ENST00000490387 OSBP2Q969R2 916 aa20.55■□□□□ 0.88
RAPGEF3-212ENST00000490387 AATFQ9NY61 560 aaKnown RBP eCLIP20.55■□□□□ 0.88
RAPGEF3-212ENST00000490387 CTU1Q7Z7A3 348 aaKnown RBP20.54■□□□□ 0.88
RAPGEF3-212ENST00000490387 IFNL1Q8IU54 200 aa20.54■□□□□ 0.88
RAPGEF3-212ENST00000490387 MIGA1Q8NAN2 632 aa20.54■□□□□ 0.88
RAPGEF3-212ENST00000490387 ZNF296Q8WUU4 475 aaPredicted RBP20.54■□□□□ 0.88
RAPGEF3-212ENST00000490387 OPTNQ96CV9 577 aa20.54■□□□□ 0.88
RAPGEF3-212ENST00000490387 HOOK2Q96ED9 719 aa20.54■□□□□ 0.88
RAPGEF3-212ENST00000490387 PUS7LQ9H0K6 701 aaKnown RBP20.54■□□□□ 0.88
RAPGEF3-212ENST00000490387 CSADQ9Y600 493 aa20.54■□□□□ 0.88
RAPGEF3-212ENST00000490387 RPAP1Q9BWH6 1393 aaPredicted RBP20.54■□□□□ 0.88
RAPGEF3-212ENST00000490387 GPR25O00155 361 aa20.53■□□□□ 0.88
RAPGEF3-212ENST00000490387 BAG3O95817 575 aa20.53■□□□□ 0.88
RAPGEF3-212ENST00000490387 GJA5P36382 358 aa20.53■□□□□ 0.88
RAPGEF3-212ENST00000490387 DYNLL1P63167 89 aaKnown RBP20.53■□□□□ 0.88
RAPGEF3-212ENST00000490387 MAP3K9P80192 1104 aa20.53■□□□□ 0.88
RAPGEF3-212ENST00000490387 CERS3Q8IU89 383 aa20.53■□□□□ 0.88
RAPGEF3-212ENST00000490387 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.53■□□□□ 0.88
RAPGEF3-212ENST00000490387 A0A0D9SFI3 127 aa20.52■□□□□ 0.88
RAPGEF3-212ENST00000490387 MAGEB6P1A0A0J9YX57 407 aa20.52■□□□□ 0.88
RAPGEF3-212ENST00000490387 M0R2C6 588 aa20.52■□□□□ 0.88
RAPGEF3-212ENST00000490387 WDHD1O75717 1129 aaPredicted RBP20.52■□□□□ 0.88
RAPGEF3-212ENST00000490387 PLCG2P16885 1265 aa20.52■□□□□ 0.88
RAPGEF3-212ENST00000490387 VGLL4Q14135 290 aa20.52■□□□□ 0.88
RAPGEF3-212ENST00000490387 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.52■□□□□ 0.88
RAPGEF3-212ENST00000490387 SH3RF3Q8TEJ3 882 aaPredicted RBP20.52■□□□□ 0.88
RAPGEF3-212ENST00000490387 FAM227BQ96M60 508 aa20.52■□□□□ 0.88
RAPGEF3-212ENST00000490387 SEC62Q99442 399 aaKnown RBP20.52■□□□□ 0.88
RAPGEF3-212ENST00000490387 CFHR5Q9BXR6 569 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms