RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 RAD18Q9NS91 495 aa6.76□□□□□ -1.33
RBM39-235ENST00000490354 AP4E1Q9UPM8 1137 aa6.76□□□□□ -1.33
RBM39-235ENST00000490354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.76□□□□□ -1.33
RBM39-235ENST00000490354 RAPGEF6Q8TEU7 1601 aa6.76□□□□□ -1.33
RBM39-235ENST00000490354 CDK13Q14004 1512 aaKnown RBP6.76□□□□□ -1.33
RBM39-235ENST00000490354 ABCC2Q92887 1545 aa6.76□□□□□ -1.33
RBM39-235ENST00000490354 KDM5BQ9UGL1 1544 aa6.76□□□□□ -1.33
RBM39-235ENST00000490354 NCOA2Q15596 1464 aa6.75□□□□□ -1.33
RBM39-235ENST00000490354 ASPAP45381 313 aa6.75□□□□□ -1.33
RBM39-235ENST00000490354 CYP27A1Q02318 531 aa6.75□□□□□ -1.33
RBM39-235ENST00000490354 ZNF211Q13398 564 aaPredicted RBP6.75□□□□□ -1.33
RBM39-235ENST00000490354 SF3B2Q13435 895 aaKnown RBP6.75□□□□□ -1.33
RBM39-235ENST00000490354 HP1BP3Q5SSJ5 553 aaPredicted RBP6.75□□□□□ -1.33
RBM39-235ENST00000490354 SEZ6L2Q6UXD5 910 aa6.75□□□□□ -1.33
RBM39-235ENST00000490354 TRIM56Q9BRZ2 755 aaKnown RBP6.75□□□□□ -1.33
RBM39-235ENST00000490354 C1GALT1Q9NS00 363 aa6.75□□□□□ -1.33
RBM39-235ENST00000490354 DYNC1LI2O43237 492 aaPredicted RBP6.74□□□□□ -1.33
RBM39-235ENST00000490354 ABL1P00519 1130 aa6.74□□□□□ -1.33
RBM39-235ENST00000490354 PHLDB3Q6NSJ2 640 aa6.74□□□□□ -1.33
RBM39-235ENST00000490354 ZNF574Q6ZN55 896 aaPredicted RBP6.74□□□□□ -1.33
RBM39-235ENST00000490354 CORO1BQ9BR76 489 aa6.74□□□□□ -1.33
RBM39-235ENST00000490354 KRTAP4-7Q9BYR0 210 aa6.74□□□□□ -1.33
RBM39-235ENST00000490354 GSX1Q9H4S2 264 aaPredicted RBP6.74□□□□□ -1.33
RBM39-235ENST00000490354 LGR6Q9HBX8 967 aa6.74□□□□□ -1.33
RBM39-235ENST00000490354 ARHGEF11O15085 1522 aa6.74□□□□□ -1.33
RBM39-235ENST00000490354 MAGI3Q5TCQ9 1506 aa6.74□□□□□ -1.33
RBM39-235ENST00000490354 EHBP1L1Q8N3D4 1523 aa6.74□□□□□ -1.33
RBM39-235ENST00000490354 FAM50AQ14320 339 aaKnown RBP6.73□□□□□ -1.33
RBM39-235ENST00000490354 USPL1Q5W0Q7 1092 aa6.73□□□□□ -1.33
RBM39-235ENST00000490354 WFDC3Q8IUB2 231 aa6.73□□□□□ -1.33
RBM39-235ENST00000490354 BCL7CQ8WUZ0 217 aaPredicted RBP6.73□□□□□ -1.33
RBM39-235ENST00000490354 ZFYVE1Q9HBF4 777 aa6.73□□□□□ -1.33
RBM39-235ENST00000490354 CFDP1Q9UEE9 299 aaPredicted RBP6.73□□□□□ -1.33
RBM39-235ENST00000490354 MTMR7Q9Y216 660 aa6.73□□□□□ -1.33
RBM39-235ENST00000490354 DAGLAQ9Y4D2 1042 aa6.73□□□□□ -1.33
RBM39-235ENST00000490354 MYOM3Q5VTT5 1437 aa6.73□□□□□ -1.33
RBM39-235ENST00000490354 MIA2Q96PC5 1412 aa6.73□□□□□ -1.33
RBM39-235ENST00000490354 CARNS1A5YM72 827 aa6.72□□□□□ -1.33
RBM39-235ENST00000490354 AOC2O75106 756 aa6.72□□□□□ -1.33
RBM39-235ENST00000490354 PAPLNO95428 1278 aa6.72□□□□□ -1.33
RBM39-235ENST00000490354 B3GALT4O96024 378 aa6.72□□□□□ -1.33
RBM39-235ENST00000490354 OGFOD3Q6PK18 319 aa6.72□□□□□ -1.33
RBM39-235ENST00000490354 ZNF576Q9H609 170 aa6.72□□□□□ -1.33
RBM39-235ENST00000490354 SLC5A6Q9Y289 635 aa6.72□□□□□ -1.33
RBM39-235ENST00000490354 FGD6Q6ZV73 1430 aa6.72□□□□□ -1.33
RBM39-235ENST00000490354 PDE3AQ14432 1141 aa6.71□□□□□ -1.34
RBM39-235ENST00000490354 SPRED2Q7Z698 418 aa6.71□□□□□ -1.34
RBM39-235ENST00000490354 WDR18Q9BV38 432 aa6.71□□□□□ -1.34
RBM39-235ENST00000490354 PPP1R9AQ9ULJ8 1098 aa6.71□□□□□ -1.34
RBM39-235ENST00000490354 CFAP43Q8NDM7 1665 aa6.71□□□□□ -1.34
RBM39-235ENST00000490354 GPATCH8Q9UKJ3 1502 aaKnown RBP6.71□□□□□ -1.34
RBM39-235ENST00000490354 PLCL1Q15111 1095 aa6.7□□□□□ -1.34
RBM39-235ENST00000490354 ZNF792Q3KQV3 632 aa6.7□□□□□ -1.34
RBM39-235ENST00000490354 KIAA0319Q5VV43 1072 aa6.7□□□□□ -1.34
RBM39-235ENST00000490354 DDX54Q8TDD1 881 aaKnown RBP6.7□□□□□ -1.34
RBM39-235ENST00000490354 ABCC10Q5T3U5 1492 aa6.7□□□□□ -1.34
RBM39-235ENST00000490354 ITPKAP23677 461 aa6.69□□□□□ -1.34
RBM39-235ENST00000490354 BNIP3Q12983 259 aa6.69□□□□□ -1.34
RBM39-235ENST00000490354 EFCAB2Q5VUJ9 269 aa6.69□□□□□ -1.34
RBM39-235ENST00000490354 EHD4Q9H223 541 aa6.69□□□□□ -1.34
RBM39-235ENST00000490354 ASXL2Q76L83 1435 aa6.68□□□□□ -1.34
RBM39-235ENST00000490354 TCOF1Q13428 1488 aaKnown RBP6.68□□□□□ -1.34
RBM39-235ENST00000490354 WDR7Q9Y4E6 1490 aa6.68□□□□□ -1.34
RBM39-235ENST00000490354 TMPRSS2O15393 492 aa6.68□□□□□ -1.34
RBM39-235ENST00000490354 LIG1P18858 919 aa6.68□□□□□ -1.34
RBM39-235ENST00000490354 ITGAEP38570 1179 aa6.68□□□□□ -1.34
RBM39-235ENST00000490354 CYP27C1Q4G0S4 372 aa6.68□□□□□ -1.34
RBM39-235ENST00000490354 ZNF648Q5T619 568 aaPredicted RBP6.68□□□□□ -1.34
RBM39-235ENST00000490354 STK11IPQ8N1F8 1099 aa6.68□□□□□ -1.34
RBM39-235ENST00000490354 CCDC82Q8N4S0 544 aa6.68□□□□□ -1.34
RBM39-235ENST00000490354 WDR89Q96FK6 387 aaPredicted RBP6.68□□□□□ -1.34
RBM39-235ENST00000490354 NPHS2Q9NP85 383 aa6.68□□□□□ -1.34
RBM39-235ENST00000490354 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.68□□□□□ -1.34
RBM39-235ENST00000490354 ZNF644Q9H582 1327 aaPredicted RBP6.68□□□□□ -1.34
RBM39-235ENST00000490354 PLCH2O75038 1416 aa6.67□□□□□ -1.34
RBM39-235ENST00000490354 PPP1R15AO75807 674 aaPredicted RBP6.67□□□□□ -1.34
RBM39-235ENST00000490354 CDK5R2Q13319 367 aa6.67□□□□□ -1.34
RBM39-235ENST00000490354 ORC1Q13415 861 aa6.67□□□□□ -1.34
RBM39-235ENST00000490354 PLD6Q8N2A8 252 aaKnown RBP6.67□□□□□ -1.34
RBM39-235ENST00000490354 FAM181AQ8N9Y4 354 aa6.67□□□□□ -1.34
RBM39-235ENST00000490354 BRPF3Q9ULD4 1205 aa6.67□□□□□ -1.34
RBM39-235ENST00000490354 SYNGAP1Q96PV0 1343 aa6.67□□□□□ -1.34
RBM39-235ENST00000490354 ADCY10Q96PN6 1610 aa6.66□□□□□ -1.34
RBM39-235ENST00000490354 BIN1O00499 593 aa6.66□□□□□ -1.34
RBM39-235ENST00000490354 ICMTO60725 284 aa6.66□□□□□ -1.34
RBM39-235ENST00000490354 FAM87AP0C7U9 286 aa6.66□□□□□ -1.34
RBM39-235ENST00000490354 CD8BP10966 210 aa6.66□□□□□ -1.34
RBM39-235ENST00000490354 AP3B2Q13367 1082 aa6.66□□□□□ -1.34
RBM39-235ENST00000490354 MISP3Q96FF7 219 aa6.66□□□□□ -1.34
RBM39-235ENST00000490354 ZC3H12CQ9C0D7 883 aaKnown RBP6.66□□□□□ -1.34
RBM39-235ENST00000490354 CCDC86Q9H6F5 360 aaKnown RBP6.66□□□□□ -1.34
RBM39-235ENST00000490354 ABCB6Q9NP58 842 aa6.66□□□□□ -1.34
RBM39-235ENST00000490354 CRIM1Q9NZV1 1036 aa6.66□□□□□ -1.34
RBM39-235ENST00000490354 PTPRKQ15262 1439 aa6.66□□□□□ -1.34
RBM39-235ENST00000490354 SUPT6HQ7KZ85 1726 aaKnown RBP6.65□□□□□ -1.34
RBM39-235ENST00000490354 CPNE3O75131 537 aaKnown RBP6.65□□□□□ -1.34
RBM39-235ENST00000490354 NEFLP07196 543 aa6.65□□□□□ -1.34
RBM39-235ENST00000490354 TSPY4P0CV99 314 aa6.65□□□□□ -1.34
RBM39-235ENST00000490354 TSPY10P0CW01 314 aa6.65□□□□□ -1.34
RBM39-235ENST00000490354 FUT4P22083 530 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms