RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 FOCADQ5VW36 1801 aa24.17■■□□□ 1.46
SMC4-222ENST00000490207 CYP2E1P05181 493 aaPredicted RBP24.17■■□□□ 1.46
SMC4-222ENST00000490207 KIF1BPQ96EK5 621 aa24.17■■□□□ 1.46
SMC4-222ENST00000490207 DDX4Q9NQI0 724 aaKnown RBP24.17■■□□□ 1.46
SMC4-222ENST00000490207 APBB1O00213 710 aa24.16■■□□□ 1.46
SMC4-222ENST00000490207 NAA16Q6N069 864 aaPredicted RBP24.16■■□□□ 1.46
SMC4-222ENST00000490207 ZSCAN29Q8IWY8 852 aaPredicted RBP24.16■■□□□ 1.46
SMC4-222ENST00000490207 NOL10Q9BSC4 688 aaKnown RBP24.16■■□□□ 1.46
SMC4-222ENST00000490207 DOCK1Q14185 1865 aa24.15■■□□□ 1.46
SMC4-222ENST00000490207 TESPA1A2RU30 521 aaPredicted RBP24.15■■□□□ 1.46
SMC4-222ENST00000490207 MAP4K4O95819 1239 aaPredicted RBP24.15■■□□□ 1.46
SMC4-222ENST00000490207 INPP5BP32019 993 aa24.15■■□□□ 1.46
SMC4-222ENST00000490207 GTF2A2P52657 109 aa24.15■■□□□ 1.46
SMC4-222ENST00000490207 NOM1Q5C9Z4 860 aaKnown RBP24.15■■□□□ 1.46
SMC4-222ENST00000490207 OTUD7BQ6GQQ9 843 aa24.15■■□□□ 1.46
SMC4-222ENST00000490207 ERO1BQ86YB8 467 aa24.15■■□□□ 1.46
SMC4-222ENST00000490207 ZNF296Q8WUU4 475 aaPredicted RBP24.15■■□□□ 1.46
SMC4-222ENST00000490207 ZNF112Q9UJU3 913 aa24.15■■□□□ 1.46
SMC4-222ENST00000490207 COL2A1P02458 1487 aaPredicted RBP24.14■■□□□ 1.46
SMC4-222ENST00000490207 GPR25O00155 361 aa24.14■■□□□ 1.45
SMC4-222ENST00000490207 SH3BP5LQ7L8J4 393 aa24.14■■□□□ 1.45
SMC4-222ENST00000490207 MS4A4AQ96JQ5 239 aa24.14■■□□□ 1.45
SMC4-222ENST00000490207 PIH1D3Q9NQM4 214 aaKnown RBP24.14■■□□□ 1.45
SMC4-222ENST00000490207 CCL15-CCL14A0A0B4J2E2 113 aa24.13■■□□□ 1.45
SMC4-222ENST00000490207 IGSF3O75054 1194 aa24.13■■□□□ 1.45
SMC4-222ENST00000490207 RAB11FIP3O75154 756 aa24.13■■□□□ 1.45
SMC4-222ENST00000490207 PPIL2Q13356 520 aa24.13■■□□□ 1.45
SMC4-222ENST00000490207 CCL15Q16663 113 aa24.13■■□□□ 1.45
SMC4-222ENST00000490207 CLASRPQ8N2M8 674 aaKnown RBP24.13■■□□□ 1.45
SMC4-222ENST00000490207 YTHDC1Q96MU7 727 aaKnown RBP24.13■■□□□ 1.45
SMC4-222ENST00000490207 R3HDMLQ9H3Y0 253 aa24.13■■□□□ 1.45
SMC4-222ENST00000490207 DDTLA6NHG4 134 aaPredicted RBP24.12■■□□□ 1.45
SMC4-222ENST00000490207 NPM3O75607 178 aaKnown RBP24.12■■□□□ 1.45
SMC4-222ENST00000490207 CTU1Q7Z7A3 348 aaKnown RBP24.12■■□□□ 1.45
SMC4-222ENST00000490207 TEX11Q8IYF3 940 aa24.12■■□□□ 1.45
SMC4-222ENST00000490207 BRI3BPQ8WY22 251 aa24.12■■□□□ 1.45
SMC4-222ENST00000490207 PTPN18Q99952 460 aa24.12■■□□□ 1.45
SMC4-222ENST00000490207 AATFQ9NY61 560 aaKnown RBP eCLIP24.12■■□□□ 1.45
SMC4-222ENST00000490207 NOL9Q5SY16 702 aaKnown RBP24.11■■□□□ 1.45
SMC4-222ENST00000490207 NDUFB9Q9Y6M9 179 aa24.11■■□□□ 1.45
SMC4-222ENST00000490207 SIPA1L1O43166 1804 aa24.1■■□□□ 1.45
SMC4-222ENST00000490207 ATAD5Q96QE3 1844 aa24.1■■□□□ 1.45
SMC4-222ENST00000490207 IRF6O14896 467 aa24.1■■□□□ 1.45
SMC4-222ENST00000490207 FKTNO75072 461 aa24.1■■□□□ 1.45
SMC4-222ENST00000490207 IDH1O75874 414 aaKnown RBP24.1■■□□□ 1.45
SMC4-222ENST00000490207 BAG3O95817 575 aa24.1■■□□□ 1.45
SMC4-222ENST00000490207 IFIT2P09913 472 aaKnown RBP24.1■■□□□ 1.45
SMC4-222ENST00000490207 PPATQ06203 517 aa24.1■■□□□ 1.45
SMC4-222ENST00000490207 ADGRA1Q86SQ6 560 aa24.1■■□□□ 1.45
SMC4-222ENST00000490207 SH3RF3Q8TEJ3 882 aaPredicted RBP24.1■■□□□ 1.45
SMC4-222ENST00000490207 OSBPL5Q9H0X9 879 aaPredicted RBP24.1■■□□□ 1.45
SMC4-222ENST00000490207 CETPP11597 493 aa24.09■■□□□ 1.45
SMC4-222ENST00000490207 PLCG2P16885 1265 aa24.09■■□□□ 1.45
SMC4-222ENST00000490207 CRHR2Q13324 411 aa24.09■■□□□ 1.45
SMC4-222ENST00000490207 SNAPC2Q13487 334 aa24.09■■□□□ 1.45
SMC4-222ENST00000490207 BCL11AQ9H165 835 aa24.09■■□□□ 1.45
SMC4-222ENST00000490207 RRP1P56182 461 aaKnown RBP24.08■■□□□ 1.45
SMC4-222ENST00000490207 ANTXR1Q9H6X2 564 aa24.08■■□□□ 1.45
SMC4-222ENST00000490207 PHIPQ8WWQ0 1821 aa24.07■■□□□ 1.44
SMC4-222ENST00000490207 PHF20L1A8MW92 1017 aa24.07■■□□□ 1.44
SMC4-222ENST00000490207 CYP7A1P22680 504 aa24.07■■□□□ 1.44
SMC4-222ENST00000490207 PPP4CP60510 307 aa24.07■■□□□ 1.44
SMC4-222ENST00000490207 MAP3K10Q02779 954 aa24.07■■□□□ 1.44
SMC4-222ENST00000490207 SCYL3Q8IZE3 742 aa24.07■■□□□ 1.44
SMC4-222ENST00000490207 PTPRFP10586 1907 aa24.06■■□□□ 1.44
SMC4-222ENST00000490207 CCDC85CA6NKD9 419 aa24.06■■□□□ 1.44
SMC4-222ENST00000490207 SLURP2P0DP57 97 aa24.06■■□□□ 1.44
SMC4-222ENST00000490207 TAF1CQ15572 869 aaPredicted RBP24.06■■□□□ 1.44
SMC4-222ENST00000490207 FAM43AQ8N2R8 423 aa24.06■■□□□ 1.44
SMC4-222ENST00000490207 MAGEB6Q8N7X4 407 aa24.06■■□□□ 1.44
SMC4-222ENST00000490207 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.06■■□□□ 1.44
SMC4-222ENST00000490207 MAP3K12Q12852 859 aa24.05■■□□□ 1.44
SMC4-222ENST00000490207 PICK1Q9NRD5 415 aa24.05■■□□□ 1.44
SMC4-222ENST00000490207 KCNH4Q9UQ05 1017 aa24.05■■□□□ 1.44
SMC4-222ENST00000490207 MYH1P12882 1939 aa24.05■■□□□ 1.44
SMC4-222ENST00000490207 FLT1P17948 1338 aa24.05■■□□□ 1.44
SMC4-222ENST00000490207 FAM196BA6NMK8 535 aa24.04■■□□□ 1.44
SMC4-222ENST00000490207 TBC1D12O60347 775 aa24.04■■□□□ 1.44
SMC4-222ENST00000490207 TTF1Q15361 905 aaPredicted RBP24.04■■□□□ 1.44
SMC4-222ENST00000490207 MAPKAPK5Q8IW41 473 aa24.04■■□□□ 1.44
SMC4-222ENST00000490207 TGFBRAP1Q8WUH2 860 aa24.04■■□□□ 1.44
SMC4-222ENST00000490207 DNAJC2Q99543 621 aaKnown RBP24.04■■□□□ 1.44
SMC4-222ENST00000490207 LRRCC1Q9C099 1032 aa24.04■■□□□ 1.44
SMC4-222ENST00000490207 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.04■■□□□ 1.44
SMC4-222ENST00000490207 ZFYVE28Q9HCC9 887 aa24.04■■□□□ 1.44
SMC4-222ENST00000490207 NAV1Q8NEY1 1877 aa24.04■■□□□ 1.44
SMC4-222ENST00000490207 MYH7P12883 1935 aa24.04■■□□□ 1.44
SMC4-222ENST00000490207 BTBD19C9JJ37 291 aa24.03■■□□□ 1.44
SMC4-222ENST00000490207 DYNLL1P63167 89 aaKnown RBP24.03■■□□□ 1.44
SMC4-222ENST00000490207 TMED8Q6PL24 325 aaPredicted RBP24.03■■□□□ 1.44
SMC4-222ENST00000490207 ZCCHC17Q9NP64 241 aaKnown RBP24.03■■□□□ 1.44
SMC4-222ENST00000490207 CTNND1O60716 968 aaKnown RBP24.02■■□□□ 1.44
SMC4-222ENST00000490207 PKN2Q16513 984 aaKnown RBP24.02■■□□□ 1.44
SMC4-222ENST00000490207 CERS3Q8IU89 383 aa24.02■■□□□ 1.44
SMC4-222ENST00000490207 MIGA1Q8NAN2 632 aa24.02■■□□□ 1.44
SMC4-222ENST00000490207 DDX60LQ5H9U9 1706 aaKnown RBP24.01■■□□□ 1.43
SMC4-222ENST00000490207 PTPRAP18433 802 aa24.01■■□□□ 1.43
SMC4-222ENST00000490207 ERO1AQ96HE7 468 aa24.01■■□□□ 1.43
SMC4-222ENST00000490207 DHX36Q9H2U1 1008 aaKnown RBP24.01■■□□□ 1.43
SMC4-222ENST00000490207 GOLIM4O00461 696 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 459.1 ms