RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 ABCF2Q9UG63 623 aa11.99□□□□□ -0.49
TMEM39A-210ENST00000490099 HPS5Q9UPZ3 1129 aa11.99□□□□□ -0.49
TMEM39A-210ENST00000490099 KCNH4Q9UQ05 1017 aa11.99□□□□□ -0.49
TMEM39A-210ENST00000490099 FPGT-TNNI3KV9GXZ4 949 aa11.99□□□□□ -0.49
TMEM39A-210ENST00000490099 MROH7-TTC4A0A0A0MT08 1334 aa11.98□□□□□ -0.49
TMEM39A-210ENST00000490099 SURF6O75683 361 aaKnown RBP11.98□□□□□ -0.49
TMEM39A-210ENST00000490099 RGS3P49796 1198 aa11.98□□□□□ -0.49
TMEM39A-210ENST00000490099 CAP1Q01518 475 aa11.98□□□□□ -0.49
TMEM39A-210ENST00000490099 MOGSQ13724 837 aa11.98□□□□□ -0.49
TMEM39A-210ENST00000490099 CEP85Q6P2H3 762 aa11.98□□□□□ -0.49
TMEM39A-210ENST00000490099 TBC1D9Q6ZT07 1266 aa11.98□□□□□ -0.49
TMEM39A-210ENST00000490099 ERICH6Q7L0X2 663 aa11.98□□□□□ -0.49
TMEM39A-210ENST00000490099 DZIP1Q86YF9 867 aaKnown RBP11.98□□□□□ -0.49
TMEM39A-210ENST00000490099 ITPRIPQ8IWB1 547 aa11.98□□□□□ -0.49
TMEM39A-210ENST00000490099 FTSJ3Q8IY81 847 aaKnown RBP11.98□□□□□ -0.49
TMEM39A-210ENST00000490099 FAM43AQ8N2R8 423 aa11.98□□□□□ -0.49
TMEM39A-210ENST00000490099 OTUD5Q96G74 571 aa11.98□□□□□ -0.49
TMEM39A-210ENST00000490099 MYH2Q9UKX2 1941 aa11.98□□□□□ -0.49
TMEM39A-210ENST00000490099 CCL15-CCL14A0A0B4J2E2 113 aa11.97□□□□□ -0.49
TMEM39A-210ENST00000490099 TBC1D12O60347 775 aa11.97□□□□□ -0.49
TMEM39A-210ENST00000490099 CETPP11597 493 aa11.97□□□□□ -0.49
TMEM39A-210ENST00000490099 BTDP43251 543 aa11.97□□□□□ -0.49
TMEM39A-210ENST00000490099 FXR2P51116 673 aaKnown RBP eCLIP11.97□□□□□ -0.49
TMEM39A-210ENST00000490099 SNAPC2Q13487 334 aa11.97□□□□□ -0.49
TMEM39A-210ENST00000490099 CCL15Q16663 113 aa11.97□□□□□ -0.49
TMEM39A-210ENST00000490099 OTOP1Q7RTM1 612 aa11.97□□□□□ -0.49
TMEM39A-210ENST00000490099 PANK1Q8TE04 598 aa11.97□□□□□ -0.49
TMEM39A-210ENST00000490099 DBNDD2Q9BQY9 259 aa11.97□□□□□ -0.49
TMEM39A-210ENST00000490099 C1orf115Q9H7X2 142 aa11.97□□□□□ -0.49
TMEM39A-210ENST00000490099 DDX4Q9NQI0 724 aaKnown RBP11.97□□□□□ -0.49
TMEM39A-210ENST00000490099 DDTLA6NHG4 134 aaPredicted RBP11.96□□□□□ -0.49
TMEM39A-210ENST00000490099 BTBD19C9JJ37 291 aa11.96□□□□□ -0.49
TMEM39A-210ENST00000490099 LDHCP07864 332 aa11.96□□□□□ -0.49
TMEM39A-210ENST00000490099 MS4A1P11836 297 aa11.96□□□□□ -0.49
TMEM39A-210ENST00000490099 PPP4CP60510 307 aa11.96□□□□□ -0.49
TMEM39A-210ENST00000490099 GSTO1P78417 241 aa11.96□□□□□ -0.49
TMEM39A-210ENST00000490099 SP3Q02447 781 aa11.96□□□□□ -0.49
TMEM39A-210ENST00000490099 MLLT1Q03111 559 aaPredicted RBP11.96□□□□□ -0.49
TMEM39A-210ENST00000490099 GORABQ5T7V8 394 aa11.96□□□□□ -0.49
TMEM39A-210ENST00000490099 EAF2Q96CJ1 260 aaPredicted RBP11.96□□□□□ -0.49
TMEM39A-210ENST00000490099 ERO1AQ96HE7 468 aa11.96□□□□□ -0.49
TMEM39A-210ENST00000490099 ZBTB40Q9NUA8 1239 aa11.96□□□□□ -0.49
TMEM39A-210ENST00000490099 DBNLQ9UJU6 430 aaKnown RBP11.96□□□□□ -0.49
TMEM39A-210ENST00000490099 CXCL11O14625 94 aa11.95□□□□□ -0.5
TMEM39A-210ENST00000490099 TLR2O60603 784 aa11.95□□□□□ -0.5
TMEM39A-210ENST00000490099 CYP2E1P05181 493 aaPredicted RBP11.95□□□□□ -0.5
TMEM39A-210ENST00000490099 CCDC158Q5M9N0 1113 aa11.95□□□□□ -0.5
TMEM39A-210ENST00000490099 ZFYVE28Q9HCC9 887 aa11.95□□□□□ -0.5
TMEM39A-210ENST00000490099 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.95□□□□□ -0.5
TMEM39A-210ENST00000490099 COL2A1P02458 1487 aaPredicted RBP11.95□□□□□ -0.5
TMEM39A-210ENST00000490099 CTNND1O60716 968 aaKnown RBP11.94□□□□□ -0.5
TMEM39A-210ENST00000490099 PTPRAP18433 802 aa11.94□□□□□ -0.5
TMEM39A-210ENST00000490099 ANKRD23Q86SG2 305 aa11.94□□□□□ -0.5
TMEM39A-210ENST00000490099 METTL16Q86W50 562 aaKnown RBP11.94□□□□□ -0.5
TMEM39A-210ENST00000490099 SIRT2Q8IXJ6 389 aa11.94□□□□□ -0.5
TMEM39A-210ENST00000490099 PTPN22Q9Y2R2 807 aa11.94□□□□□ -0.5
TMEM39A-210ENST00000490099 TRIM17Q9Y577 477 aa11.94□□□□□ -0.5
TMEM39A-210ENST00000490099 ADGRA2Q96PE1 1338 aa11.93□□□□□ -0.5
TMEM39A-210ENST00000490099 SLURP2P0DP57 97 aa11.93□□□□□ -0.5
TMEM39A-210ENST00000490099 TAF1CQ15572 869 aaPredicted RBP11.93□□□□□ -0.5
TMEM39A-210ENST00000490099 GPAT2Q6NUI2 795 aa11.93□□□□□ -0.5
TMEM39A-210ENST00000490099 C17orf99Q6UX52 265 aa11.93□□□□□ -0.5
TMEM39A-210ENST00000490099 ERC1Q8IUD2 1116 aa11.93□□□□□ -0.5
TMEM39A-210ENST00000490099 RPAP2Q8IXW5 612 aaPredicted RBP11.93□□□□□ -0.5
TMEM39A-210ENST00000490099 SCYL3Q8IZE3 742 aa11.93□□□□□ -0.5
TMEM39A-210ENST00000490099 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.93□□□□□ -0.5
TMEM39A-210ENST00000490099 CD99L2Q8TCZ2 262 aa11.93□□□□□ -0.5
TMEM39A-210ENST00000490099 ARMC5Q96C12 935 aa11.93□□□□□ -0.5
TMEM39A-210ENST00000490099 SNRKQ9NRH2 765 aa11.93□□□□□ -0.5
TMEM39A-210ENST00000490099 RAI14Q9P0K7 980 aa11.93□□□□□ -0.5
TMEM39A-210ENST00000490099 LRP2BPQ9P2M1 347 aa11.93□□□□□ -0.5
TMEM39A-210ENST00000490099 AFG3L2Q9Y4W6 797 aa11.93□□□□□ -0.5
TMEM39A-210ENST00000490099 OS9Q13438 667 aaPredicted RBP11.92□□□□□ -0.5
TMEM39A-210ENST00000490099 TTC39AQ5SRH9 613 aa11.92□□□□□ -0.5
TMEM39A-210ENST00000490099 TMED8Q6PL24 325 aaPredicted RBP11.92□□□□□ -0.5
TMEM39A-210ENST00000490099 ADGRA1Q86SQ6 560 aa11.92□□□□□ -0.5
TMEM39A-210ENST00000490099 OSBPL5Q9H0X9 879 aaPredicted RBP11.92□□□□□ -0.5
TMEM39A-210ENST00000490099 EFCC1Q9HA90 598 aa11.92□□□□□ -0.5
TMEM39A-210ENST00000490099 PIH1D3Q9NQM4 214 aaKnown RBP11.92□□□□□ -0.5
TMEM39A-210ENST00000490099 TLR7Q9NYK1 1049 aaKnown RBP11.92□□□□□ -0.5
TMEM39A-210ENST00000490099 RCAN3Q9UKA8 241 aa11.92□□□□□ -0.5
TMEM39A-210ENST00000490099 PDE4DIPQ5VU43 2346 aa11.91□□□□□ -0.5
TMEM39A-210ENST00000490099 A0A0G2JLL6 359 aaPredicted RBP11.91□□□□□ -0.5
TMEM39A-210ENST00000490099 ZAP70P43403 619 aa11.91□□□□□ -0.5
TMEM39A-210ENST00000490099 SOX10P56693 466 aa11.91□□□□□ -0.5
TMEM39A-210ENST00000490099 PDE3AQ14432 1141 aa11.91□□□□□ -0.5
TMEM39A-210ENST00000490099 HSP90AB4PQ58FF6 505 aa11.91□□□□□ -0.5
TMEM39A-210ENST00000490099 NAA16Q6N069 864 aaPredicted RBP11.91□□□□□ -0.5
TMEM39A-210ENST00000490099 PRRT2Q7Z6L0 340 aaPredicted RBP11.91□□□□□ -0.5
TMEM39A-210ENST00000490099 PIP4P2Q8N4L2 257 aa11.91□□□□□ -0.5
TMEM39A-210ENST00000490099 RHPN1Q8TCX5 695 aa11.91□□□□□ -0.5
TMEM39A-210ENST00000490099 SH3RF3Q8TEJ3 882 aaPredicted RBP11.91□□□□□ -0.5
TMEM39A-210ENST00000490099 CCDC8Q9H0W5 538 aaPredicted RBP11.91□□□□□ -0.5
TMEM39A-210ENST00000490099 DDX19BQ9UMR2 479 aa11.91□□□□□ -0.5
TMEM39A-210ENST00000490099 SLC45A1Q9Y2W3 748 aa11.91□□□□□ -0.5
TMEM39A-210ENST00000490099 ZHX2Q9Y6X8 837 aa11.91□□□□□ -0.5
TMEM39A-210ENST00000490099 KIAA0100Q14667 2235 aaKnown RBP11.91□□□□□ -0.5
TMEM39A-210ENST00000490099 AK9Q5TCS8 1911 aa11.9□□□□□ -0.5
TMEM39A-210ENST00000490099 HTTP42858 3142 aa11.9□□□□□ -0.5
TMEM39A-210ENST00000490099 PDHXO00330 501 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms