RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, human

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITSN1-231	ENST00000489261	CCDC69	A6NI79	296 aa		12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	GOLGA8B	A8MQT2	603 aa		12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261		B4E1Z4	1266 aa		12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	IFIT3	O14879	490 aa	Known RBP	12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	ZBTB43	O43298	467 aa		12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	FGR	P09769	529 aa		12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	SBK1	Q52WX2	424 aa		12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	TMEM67	Q5HYA8	995 aa		12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	CYB5R4	Q7L1T6	521 aa		12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	GAS2L3	Q86XJ1	694 aa		12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	SP8	Q8IXZ3	490 aa		12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	CCDC24	Q8N4L8	307 aa		12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	WASF1	Q92558	559 aa		12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	ESR2	Q92731	530 aa		12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	DDX11	Q96FC9	970 aa		12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	ZSWIM5	Q9P217	1185 aa		12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	GGA1	Q9UJY5	639 aa		12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	HPS5	Q9UPZ3	1129 aa		12.67	□□□□□ -0.38
ITSN1-231	ENST00000489261	DICER1	Q9UPY3	1922 aa	Known RBP	12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	GOLGA6L4	A6NEF3	574 aa		12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	FIBP	O43427	364 aa		12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	PRKAB2	O43741	272 aa		12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	GADD45B	O75293	160 aa	Predicted RBP	12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	BAG3	O95817	575 aa		12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	METAP2	P50579	478 aa	Known RBP eCLIP	12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	MECOM	Q03112	1051 aa		12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	NFXL1	Q6ZNB6	911 aa		12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	SLF2	Q8IX21	1173 aa		12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	MIGA1	Q8NAN2	632 aa		12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	SPATA32	Q96LK8	384 aa		12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	LY9	Q9HBG7	655 aa		12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	ORC3	Q9UBD5	711 aa	Predicted RBP	12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	SLC12A7	Q9Y666	1083 aa		12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	SLX4	Q8IY92	1834 aa		12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	NID2	Q14112	1375 aa		12.66	□□□□□ -0.38
ITSN1-231	ENST00000489261	COL4A1	P02462	1669 aa		12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	KDM4A	O75164	1064 aa		12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	LDHB	P07195	334 aa	Known RBP	12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	IL1R1	P14778	569 aa		12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	ALDH1B1	P30837	517 aa		12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	PDE6B	P35913	854 aa		12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	PPP4C	P60510	307 aa		12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	CTDSPL2	Q05D32	466 aa		12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	WTAP	Q15007	396 aa		12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	DALRD3	Q5D0E6	543 aa	Known RBP	12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	APOA5	Q6Q788	366 aa		12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	BRAP	Q7Z569	592 aa		12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	TBC1D22A	Q8WUA7	517 aa		12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	CHAMP1	Q96JM3	812 aa		12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	C8orf76	Q96K31	380 aa		12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	NOL10	Q9BSC4	688 aa	Known RBP	12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	GDPD2	Q9HCC8	539 aa		12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	NCOA5	Q9HCD5	579 aa	Known RBP	12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	RCOR1	Q9UKL0	485 aa		12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	TIAM2	Q8IVF5	1701 aa		12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	COL1A1	P02452	1464 aa	Predicted RBP	12.65	□□□□□ -0.38
ITSN1-231	ENST00000489261	NEDD4	P46934	1319 aa		12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	STK36	Q9NRP7	1315 aa		12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	MYO5A	Q9Y4I1	1855 aa	Known RBP	12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	WTIP	A6NIX2	430 aa	Predicted RBP	12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	FDPS	P14324	419 aa	Known RBP	12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	NPR1	P16066	1061 aa		12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	GPSM2	P81274	684 aa		12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	CHAF1A	Q13111	956 aa	Predicted RBP	12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	CCDC178	Q5BJE1	867 aa		12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	ADGRA1	Q86SQ6	560 aa		12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	TTC6	Q86TZ1	520 aa		12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	FERMT3	Q86UX7	667 aa		12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	DZIP1	Q86YF9	867 aa	Known RBP	12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	FBXO18	Q8NFZ0	1043 aa		12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	LEO1	Q8WVC0	666 aa	Predicted RBP	12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	UBAC1	Q9BSL1	405 aa		12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	TMX4	Q9H1E5	349 aa	Predicted RBP	12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	GPHN	Q9NQX3	736 aa	Predicted RBP	12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	RBM27	Q9P2N5	1060 aa	Known RBP	12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	ARPP21	Q9UBL0	812 aa	Predicted RBP	12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.64	□□□□□ -0.39
ITSN1-231	ENST00000489261	GOLGA8A	A7E2F4	631 aa		12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	MINDY4B	A8MYZ0	360 aa		12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	ORC4	O43929	436 aa		12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	CALM1	P0DP23	149 aa		12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	CALM2	P0DP24	149 aa		12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	CALM3	P0DP25	149 aa		12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	PLCG2	P16885	1265 aa		12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	KLRK1	P26718	216 aa		12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	IARS	P41252	1262 aa	Known RBP	12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	NASP	P49321	788 aa	Predicted RBP	12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	DYNLL1	P63167	89 aa	Known RBP	12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	SSRP1	Q08945	709 aa	Known RBP	12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	UVSSA	Q2YD98	709 aa		12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	IQCA1	Q86XH1	822 aa		12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	C2CD5	Q86YS7	1000 aa		12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	AMOTL1	Q8IY63	956 aa		12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	TSPY26P	Q9H489	355 aa		12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	CD209	Q9NNX6	404 aa		12.63	□□□□□ -0.39
ITSN1-231	ENST00000489261	TOMM22	Q9NS69	142 aa		12.63	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms