RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 IPO8O15397 1037 aaKnown RBP14.27□□□□□ -0.13
USP11-210ENST00000489030 SLC5A1P13866 664 aa14.27□□□□□ -0.13
USP11-210ENST00000489030 PTPRAP18433 802 aa14.27□□□□□ -0.13
USP11-210ENST00000489030 RGS3P49796 1198 aa14.27□□□□□ -0.13
USP11-210ENST00000489030 WDR66Q8TBY9 1149 aa14.27□□□□□ -0.13
USP11-210ENST00000489030 LPIN2Q92539 896 aa14.27□□□□□ -0.13
USP11-210ENST00000489030 PARK7Q99497 189 aaKnown RBP14.27□□□□□ -0.13
USP11-210ENST00000489030 RFX7Q2KHR2 1363 aa14.26□□□□□ -0.13
USP11-210ENST00000489030 A0A0G2JLL6 359 aaPredicted RBP14.26□□□□□ -0.13
USP11-210ENST00000489030 DDTLA6NHG4 134 aaPredicted RBP14.26□□□□□ -0.13
USP11-210ENST00000489030 FARP2O94887 1054 aaPredicted RBP14.26□□□□□ -0.13
USP11-210ENST00000489030 HOXD10P28358 340 aa14.26□□□□□ -0.13
USP11-210ENST00000489030 FCGRTP55899 365 aa14.26□□□□□ -0.13
USP11-210ENST00000489030 PRRT2Q7Z6L0 340 aaPredicted RBP14.26□□□□□ -0.13
USP11-210ENST00000489030 PA2G4Q9UQ80 394 aaKnown RBP14.26□□□□□ -0.13
USP11-210ENST00000489030 ZHX2Q9Y6X8 837 aa14.26□□□□□ -0.13
USP11-210ENST00000489030 AK9Q5TCS8 1911 aa14.25□□□□□ -0.13
USP11-210ENST00000489030 PTPRCP08575 1304 aa14.25□□□□□ -0.13
USP11-210ENST00000489030 CXCL11O14625 94 aa14.25□□□□□ -0.13
USP11-210ENST00000489030 ADCY3O60266 1144 aa14.25□□□□□ -0.13
USP11-210ENST00000489030 INHAP05111 366 aa14.25□□□□□ -0.13
USP11-210ENST00000489030 LDHBP07195 334 aaKnown RBP14.25□□□□□ -0.13
USP11-210ENST00000489030 FLT3LGP49771 235 aa14.25□□□□□ -0.13
USP11-210ENST00000489030 ATP2B3Q16720 1220 aa14.25□□□□□ -0.13
USP11-210ENST00000489030 GADL1Q6ZQY3 521 aa14.25□□□□□ -0.13
USP11-210ENST00000489030 SCYL3Q8IZE3 742 aa14.25□□□□□ -0.13
USP11-210ENST00000489030 DIS3LQ8TF46 1054 aaKnown RBP14.25□□□□□ -0.13
USP11-210ENST00000489030 ARHGAP45Q92619 1136 aa14.25□□□□□ -0.13
USP11-210ENST00000489030 LRCH3Q96II8 777 aa14.25□□□□□ -0.13
USP11-210ENST00000489030 NOB1Q9ULX3 412 aaKnown RBP14.25□□□□□ -0.13
USP11-210ENST00000489030 AFG3L2Q9Y4W6 797 aa14.25□□□□□ -0.13
USP11-210ENST00000489030 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.25□□□□□ -0.13
USP11-210ENST00000489030 DOCK3Q8IZD9 2030 aa14.24□□□□□ -0.13
USP11-210ENST00000489030 FAM196BA6NMK8 535 aa14.24□□□□□ -0.13
USP11-210ENST00000489030 MS4A1P11836 297 aa14.24□□□□□ -0.13
USP11-210ENST00000489030 NKX2-3Q8TAU0 364 aa14.24□□□□□ -0.13
USP11-210ENST00000489030 ZNF384Q8TF68 577 aa14.24□□□□□ -0.13
USP11-210ENST00000489030 FRAT1Q92837 279 aaPredicted RBP14.24□□□□□ -0.13
USP11-210ENST00000489030 MGAMO43451 1857 aa14.24□□□□□ -0.13
USP11-210ENST00000489030 MYH13Q9UKX3 1938 aa14.23□□□□□ -0.13
USP11-210ENST00000489030 GAKO14976 1311 aa14.23□□□□□ -0.13
USP11-210ENST00000489030 LAMA3Q16787 3333 aa14.23□□□□□ -0.13
USP11-210ENST00000489030 TRIM75PA6NK02 468 aa14.23□□□□□ -0.13
USP11-210ENST00000489030 SGPL1O95470 568 aa14.23□□□□□ -0.13
USP11-210ENST00000489030 UBXN2AP68543 259 aa14.23□□□□□ -0.13
USP11-210ENST00000489030 TREML2Q5T2D2 321 aa14.23□□□□□ -0.13
USP11-210ENST00000489030 ZKSCAN2Q63HK3 967 aa14.23□□□□□ -0.13
USP11-210ENST00000489030 SLAIN1Q8ND83 568 aa14.23□□□□□ -0.13
USP11-210ENST00000489030 DEFB118Q96PH6 123 aa14.23□□□□□ -0.13
USP11-210ENST00000489030 IDI2Q9BXS1 227 aa14.23□□□□□ -0.13
USP11-210ENST00000489030 STAP2Q9UGK3 403 aa14.23□□□□□ -0.13
USP11-210ENST00000489030 SUPT16HQ9Y5B9 1047 aaKnown RBP14.23□□□□□ -0.13
USP11-210ENST00000489030 SALL1Q9NSC2 1324 aa14.22□□□□□ -0.13
USP11-210ENST00000489030 MAP3K10Q02779 954 aa14.22□□□□□ -0.13
USP11-210ENST00000489030 TRIM32Q13049 653 aa14.22□□□□□ -0.13
USP11-210ENST00000489030 RASGRF1Q13972 1273 aa14.22□□□□□ -0.13
USP11-210ENST00000489030 RRP1BQ14684 758 aaKnown RBP14.22□□□□□ -0.13
USP11-210ENST00000489030 ANKRD13CQ8N6S4 541 aa14.22□□□□□ -0.13
USP11-210ENST00000489030 HTATIP2Q9BUP3 242 aa14.22□□□□□ -0.13
USP11-210ENST00000489030 API5Q9BZZ5 524 aaKnown RBP14.22□□□□□ -0.13
USP11-210ENST00000489030 PHIPQ8WWQ0 1821 aa14.22□□□□□ -0.13
USP11-210ENST00000489030 PTPRFP10586 1907 aa14.21□□□□□ -0.13
USP11-210ENST00000489030 ALPK3Q96L96 1907 aa14.21□□□□□ -0.13
USP11-210ENST00000489030 PEX10O60683 326 aa14.21□□□□□ -0.13
USP11-210ENST00000489030 ENTPD3O75355 529 aa14.21□□□□□ -0.13
USP11-210ENST00000489030 PICALMQ13492 652 aa14.21□□□□□ -0.13
USP11-210ENST00000489030 CCDC102BQ68D86 513 aa14.21□□□□□ -0.13
USP11-210ENST00000489030 ATF7IPQ6VMQ6 1270 aa14.21□□□□□ -0.13
USP11-210ENST00000489030 ZSCAN29Q8IWY8 852 aaPredicted RBP14.21□□□□□ -0.13
USP11-210ENST00000489030 PICK1Q9NRD5 415 aa14.21□□□□□ -0.13
USP11-210ENST00000489030 CEP126Q9P2H0 1117 aa14.21□□□□□ -0.13
USP11-210ENST00000489030 TAOK2Q9UL54 1235 aa14.21□□□□□ -0.13
USP11-210ENST00000489030 DOCK2Q92608 1830 aa14.2□□□□□ -0.14
USP11-210ENST00000489030 MYH2Q9UKX2 1941 aa14.2□□□□□ -0.14
USP11-210ENST00000489030 TNPO2O14787 897 aaKnown RBP14.2□□□□□ -0.14
USP11-210ENST00000489030 CIAO1O76071 339 aa14.2□□□□□ -0.14
USP11-210ENST00000489030 TFRCP02786 760 aaKnown RBP14.2□□□□□ -0.14
USP11-210ENST00000489030 BTDP43251 543 aa14.2□□□□□ -0.14
USP11-210ENST00000489030 RRP1P56182 461 aaKnown RBP14.2□□□□□ -0.14
USP11-210ENST00000489030 RHBDL3P58872 404 aa14.2□□□□□ -0.14
USP11-210ENST00000489030 TIMM10P62072 90 aa14.2□□□□□ -0.14
USP11-210ENST00000489030 PI16Q6UXB8 463 aa14.2□□□□□ -0.14
USP11-210ENST00000489030 FASTKD5Q7L8L6 764 aaKnown RBP14.2□□□□□ -0.14
USP11-210ENST00000489030 PAWRQ96IZ0 340 aaKnown RBP14.2□□□□□ -0.14
USP11-210ENST00000489030 CRISPLD2Q9H0B8 497 aa14.2□□□□□ -0.14
USP11-210ENST00000489030 PAK6Q9NQU5 681 aaPredicted RBP14.2□□□□□ -0.14
USP11-210ENST00000489030 DENND2AQ9ULE3 1009 aa14.2□□□□□ -0.14
USP11-210ENST00000489030 LRRFIP2Q9Y608 721 aaKnown RBP14.2□□□□□ -0.14
USP11-210ENST00000489030 EVI5O60447 810 aa14.19□□□□□ -0.14
USP11-210ENST00000489030 MNX1P50219 401 aaPredicted RBP14.19□□□□□ -0.14
USP11-210ENST00000489030 IRF5Q13568 498 aa14.19□□□□□ -0.14
USP11-210ENST00000489030 PXYLP1Q8TE99 480 aa14.19□□□□□ -0.14
USP11-210ENST00000489030 AGTPBP1Q9UPW5 1226 aa14.19□□□□□ -0.14
USP11-210ENST00000489030 SLC45A1Q9Y2W3 748 aa14.19□□□□□ -0.14
USP11-210ENST00000489030 NR2E3Q9Y5X4 410 aa14.19□□□□□ -0.14
USP11-210ENST00000489030 CTNND1O60716 968 aaKnown RBP14.18□□□□□ -0.14
USP11-210ENST00000489030 PDE3AQ14432 1141 aa14.18□□□□□ -0.14
USP11-210ENST00000489030 SMCR8Q8TEV9 937 aaPredicted RBP14.18□□□□□ -0.14
USP11-210ENST00000489030 GNL3LQ9NVN8 582 aaKnown RBP14.18□□□□□ -0.14
USP11-210ENST00000489030 ABCF2Q9UG63 623 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms