RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 FBXL6Q8N531 539 aa6.58□□□□□ -1.36
RFC4-213ENST00000489028 ACSBG1Q96GR2 724 aa6.58□□□□□ -1.36
RFC4-213ENST00000489028 CRELD1Q96HD1 420 aa6.58□□□□□ -1.36
RFC4-213ENST00000489028 YIPF2Q9BWQ6 316 aa6.58□□□□□ -1.36
RFC4-213ENST00000489028 ATXN3LQ9H3M9 355 aa6.58□□□□□ -1.36
RFC4-213ENST00000489028 C1GALT1Q9NS00 363 aa6.58□□□□□ -1.36
RFC4-213ENST00000489028 VTI1BQ9UEU0 232 aa6.58□□□□□ -1.36
RFC4-213ENST00000489028 DAGLAQ9Y4D2 1042 aa6.58□□□□□ -1.36
RFC4-213ENST00000489028 PCDHB5Q9Y5E4 795 aa6.58□□□□□ -1.36
RFC4-213ENST00000489028 CSADQ9Y600 493 aa6.58□□□□□ -1.36
RFC4-213ENST00000489028 USP31Q70CQ4 1352 aa6.57□□□□□ -1.36
RFC4-213ENST00000489028 DCDC2CA8MYV0 355 aa6.57□□□□□ -1.36
RFC4-213ENST00000489028 WDR64B1ANS9 1081 aa6.57□□□□□ -1.36
RFC4-213ENST00000489028 CDK8P49336 464 aa6.57□□□□□ -1.36
RFC4-213ENST00000489028 LRRC14Q15048 493 aa6.57□□□□□ -1.36
RFC4-213ENST00000489028 TAF1CQ15572 869 aaPredicted RBP6.57□□□□□ -1.36
RFC4-213ENST00000489028 UBE3DQ7Z6J8 389 aa6.57□□□□□ -1.36
RFC4-213ENST00000489028 PCDHA4Q9UN74 947 aa6.57□□□□□ -1.36
RFC4-213ENST00000489028 CYP8B1Q9UNU6 501 aa6.57□□□□□ -1.36
RFC4-213ENST00000489028 FAM170BA6NMN3 283 aa6.56□□□□□ -1.36
RFC4-213ENST00000489028 F6X3S4 739 aa6.56□□□□□ -1.36
RFC4-213ENST00000489028 TFE3P19532 575 aaPredicted RBP6.56□□□□□ -1.36
RFC4-213ENST00000489028 LIG3P49916 1009 aa6.56□□□□□ -1.36
RFC4-213ENST00000489028 ST13P50502 369 aaKnown RBP6.56□□□□□ -1.36
RFC4-213ENST00000489028 ERVK-24P63145 666 aa6.56□□□□□ -1.36
RFC4-213ENST00000489028 SEPT6Q14141 434 aa6.56□□□□□ -1.36
RFC4-213ENST00000489028 MAP7Q14244 749 aa6.56□□□□□ -1.36
RFC4-213ENST00000489028 INPP5AQ14642 412 aa6.56□□□□□ -1.36
RFC4-213ENST00000489028 PPM1JQ5JR12 505 aa6.56□□□□□ -1.36
RFC4-213ENST00000489028 LRFN4Q6PJG9 635 aa6.56□□□□□ -1.36
RFC4-213ENST00000489028 ZAR1Q86SH2 424 aa6.56□□□□□ -1.36
RFC4-213ENST00000489028 C12orf40Q86WS4 652 aa6.56□□□□□ -1.36
RFC4-213ENST00000489028 SMYD4Q8IYR2 804 aaPredicted RBP6.56□□□□□ -1.36
RFC4-213ENST00000489028 ISL2Q96A47 359 aa6.56□□□□□ -1.36
RFC4-213ENST00000489028 TBC1D32Q96NH3 1257 aa6.56□□□□□ -1.36
RFC4-213ENST00000489028 PIDD1Q9HB75 910 aa6.56□□□□□ -1.36
RFC4-213ENST00000489028 SCO2A0A1W2PP80 73 aa6.55□□□□□ -1.36
RFC4-213ENST00000489028 HYAL3O43820 417 aaPredicted RBP6.55□□□□□ -1.36
RFC4-213ENST00000489028 ZNF16P17020 682 aaPredicted RBP6.55□□□□□ -1.36
RFC4-213ENST00000489028 SSTR4P31391 388 aa6.55□□□□□ -1.36
RFC4-213ENST00000489028 RING1Q06587 406 aa6.55□□□□□ -1.36
RFC4-213ENST00000489028 LRP8Q14114 963 aa6.55□□□□□ -1.36
RFC4-213ENST00000489028 MRPL58Q14197 206 aaKnown RBP6.55□□□□□ -1.36
RFC4-213ENST00000489028 ARTNQ5T4W7 220 aa6.55□□□□□ -1.36
RFC4-213ENST00000489028 AGMOQ6ZNB7 445 aa6.55□□□□□ -1.36
RFC4-213ENST00000489028 MRS2Q9HD23 443 aa6.55□□□□□ -1.36
RFC4-213ENST00000489028 TLR6Q9Y2C9 796 aa6.55□□□□□ -1.36
RFC4-213ENST00000489028 RNGTTO60942 597 aaKnown RBP6.54□□□□□ -1.36
RFC4-213ENST00000489028 HOXA10P31260 410 aaPredicted RBP6.54□□□□□ -1.36
RFC4-213ENST00000489028 CD97P48960 835 aa6.54□□□□□ -1.36
RFC4-213ENST00000489028 RPS26P62854 115 aaKnown RBP6.54□□□□□ -1.36
RFC4-213ENST00000489028 CDK5R2Q13319 367 aa6.54□□□□□ -1.36
RFC4-213ENST00000489028 SCARA3Q6AZY7 606 aa6.54□□□□□ -1.36
RFC4-213ENST00000489028 RNF214Q8ND24 703 aa6.54□□□□□ -1.36
RFC4-213ENST00000489028 PHC3Q8NDX5 983 aa6.54□□□□□ -1.36
RFC4-213ENST00000489028 PLPPR2Q96GM1 343 aa6.54□□□□□ -1.36
RFC4-213ENST00000489028 NOC4LQ9BVI4 516 aaKnown RBP6.54□□□□□ -1.36
RFC4-213ENST00000489028 HNRNPUQ00839 825 aaKnown RBP eCLIP6.53□□□□□ -1.36
RFC4-213ENST00000489028 ZNF326Q5BKZ1 582 aaKnown RBP6.53□□□□□ -1.36
RFC4-213ENST00000489028 LDLRAD1Q5T700 205 aa6.53□□□□□ -1.36
RFC4-213ENST00000489028 XP32Q5T750 250 aa6.53□□□□□ -1.36
RFC4-213ENST00000489028 ZBTB37Q5TC79 503 aa6.53□□□□□ -1.36
RFC4-213ENST00000489028 ZNF765Q7L2R6 523 aa6.53□□□□□ -1.36
RFC4-213ENST00000489028 WIPI1Q5MNZ9 446 aaPredicted RBP6.52□□□□□ -1.37
RFC4-213ENST00000489028 CYFIP1Q7L576 1253 aa6.52□□□□□ -1.37
RFC4-213ENST00000489028 PSMG3-AS1Q96PY0 264 aa6.52□□□□□ -1.37
RFC4-213ENST00000489028 OSBPL1AQ9BXW6 950 aa6.52□□□□□ -1.37
RFC4-213ENST00000489028 ZFP64Q9NPA5 681 aa6.52□□□□□ -1.37
RFC4-213ENST00000489028 ATG3Q9NT62 314 aa6.52□□□□□ -1.37
RFC4-213ENST00000489028 PIM2Q9P1W9 311 aa6.52□□□□□ -1.37
RFC4-213ENST00000489028 KIAA1324LA8MWY0 1029 aaPredicted RBP6.51□□□□□ -1.37
RFC4-213ENST00000489028 COBLO75128 1261 aa6.51□□□□□ -1.37
RFC4-213ENST00000489028 LEFTY1O75610 366 aa6.51□□□□□ -1.37
RFC4-213ENST00000489028 ELMO3Q96BJ8 720 aa6.51□□□□□ -1.37
RFC4-213ENST00000489028 PCOLCE2Q9UKZ9 415 aa6.51□□□□□ -1.37
RFC4-213ENST00000489028 U3KQE9 123 aa6.51□□□□□ -1.37
RFC4-213ENST00000489028 PRAMEF27A3QJZ7 478 aa6.5□□□□□ -1.37
RFC4-213ENST00000489028 GFRA2O00451 464 aa6.5□□□□□ -1.37
RFC4-213ENST00000489028 ADAMTS4O75173 837 aa6.5□□□□□ -1.37
RFC4-213ENST00000489028 FAM87AP0C7U9 286 aa6.5□□□□□ -1.37
RFC4-213ENST00000489028 SPINK2P20155 84 aa6.5□□□□□ -1.37
RFC4-213ENST00000489028 OGFOD3Q6PK18 319 aa6.5□□□□□ -1.37
RFC4-213ENST00000489028 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.5□□□□□ -1.37
RFC4-213ENST00000489028 RHOVQ96L33 236 aa6.5□□□□□ -1.37
RFC4-213ENST00000489028 MIR1-1HGQ9H1L0 117 aa6.5□□□□□ -1.37
RFC4-213ENST00000489028 FBRSQ9HAH7 460 aa6.5□□□□□ -1.37
RFC4-213ENST00000489028 COPRSQ9NQ92 184 aa6.5□□□□□ -1.37
RFC4-213ENST00000489028 LEMD3Q9Y2U8 911 aa6.5□□□□□ -1.37
RFC4-213ENST00000489028 RBM47A0AV96 593 aaKnown RBP6.49□□□□□ -1.37
RFC4-213ENST00000489028 FANCGO15287 622 aa6.49□□□□□ -1.37
RFC4-213ENST00000489028 PF4P02776 101 aa6.49□□□□□ -1.37
RFC4-213ENST00000489028 FOSL1P15407 271 aa6.49□□□□□ -1.37
RFC4-213ENST00000489028 MSMPQ1L6U9 139 aa6.49□□□□□ -1.37
RFC4-213ENST00000489028 BNC2Q6ZN30 1099 aaPredicted RBP6.49□□□□□ -1.37
RFC4-213ENST00000489028 ERMP1Q7Z2K6 904 aa6.49□□□□□ -1.37
RFC4-213ENST00000489028 HDXQ7Z353 690 aa6.49□□□□□ -1.37
RFC4-213ENST00000489028 SSU72Q9NP77 194 aaKnown RBP6.49□□□□□ -1.37
RFC4-213ENST00000489028 PICK1Q9NRD5 415 aa6.49□□□□□ -1.37
RFC4-213ENST00000489028 PCMTD2Q9NV79 361 aa6.49□□□□□ -1.37
RFC4-213ENST00000489028 RBAK-RBAKDNI3L0D1 243 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms