RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 DDRGK1Q96HY6 314 aa19.07■□□□□ 0.64
CLDN11-208ENST00000488989 TDRD3Q9H7E2 651 aaKnown RBP19.07■□□□□ 0.64
CLDN11-208ENST00000488989 ARPP21Q9UBL0 812 aaPredicted RBP19.07■□□□□ 0.64
CLDN11-208ENST00000488989 WDR90Q96KV7 1748 aa19.07■□□□□ 0.64
CLDN11-208ENST00000488989 COL2A1P02458 1487 aaPredicted RBP19.06■□□□□ 0.64
CLDN11-208ENST00000488989 GLTPD2A6NH11 291 aa19.06■□□□□ 0.64
CLDN11-208ENST00000488989 H7C1D1 291 aa19.06■□□□□ 0.64
CLDN11-208ENST00000488989 ZNF213O14771 459 aa19.06■□□□□ 0.64
CLDN11-208ENST00000488989 DDX4Q9NQI0 724 aaKnown RBP19.06■□□□□ 0.64
CLDN11-208ENST00000488989 TAF6LQ9Y6J9 622 aa19.06■□□□□ 0.64
CLDN11-208ENST00000488989 SIPA1L1O43166 1804 aa19.05■□□□□ 0.64
CLDN11-208ENST00000488989 DCAF8L1A6NGE4 600 aa19.05■□□□□ 0.64
CLDN11-208ENST00000488989 USP17L12C9JPN9 530 aa19.05■□□□□ 0.64
CLDN11-208ENST00000488989 USP17L21D6R901 530 aa19.05■□□□□ 0.64
CLDN11-208ENST00000488989 KRT32Q14532 448 aa19.05■□□□□ 0.64
CLDN11-208ENST00000488989 MAPKAPK5Q8IW41 473 aa19.05■□□□□ 0.64
CLDN11-208ENST00000488989 TM6SF1Q9BZW5 370 aa19.05■□□□□ 0.64
CLDN11-208ENST00000488989 NBPF3Q9H094 633 aa19.05■□□□□ 0.64
CLDN11-208ENST00000488989 OSBPL5Q9H0X9 879 aaPredicted RBP19.05■□□□□ 0.64
CLDN11-208ENST00000488989 ZNF70Q9UC06 446 aaPredicted RBP19.05■□□□□ 0.64
CLDN11-208ENST00000488989 FAM198AQ9UFP1 575 aa19.05■□□□□ 0.64
CLDN11-208ENST00000488989 POLR2AP24928 1970 aaKnown RBP19.04■□□□□ 0.64
CLDN11-208ENST00000488989 ENTPD3O75355 529 aa19.04■□□□□ 0.64
CLDN11-208ENST00000488989 EGFRP00533 1210 aa19.04■□□□□ 0.64
CLDN11-208ENST00000488989 PPARAQ07869 468 aa19.04■□□□□ 0.64
CLDN11-208ENST00000488989 NFIAQ12857 509 aa19.04■□□□□ 0.64
CLDN11-208ENST00000488989 KIF4BQ2VIQ3 1234 aa19.04■□□□□ 0.64
CLDN11-208ENST00000488989 NBPF9Q3BBW0 867 aa19.04■□□□□ 0.64
CLDN11-208ENST00000488989 C12orf60Q5U649 245 aa19.04■□□□□ 0.64
CLDN11-208ENST00000488989 SAMD7Q7Z3H4 446 aa19.04■□□□□ 0.64
CLDN11-208ENST00000488989 IL27Q8NEV9 243 aa19.04■□□□□ 0.64
CLDN11-208ENST00000488989 MCM9Q9NXL9 1143 aa19.04■□□□□ 0.64
CLDN11-208ENST00000488989 RBM19Q9Y4C8 960 aaKnown RBP19.04■□□□□ 0.64
CLDN11-208ENST00000488989 ROBO3Q96MS0 1386 aa19.04■□□□□ 0.64
CLDN11-208ENST00000488989 MYO1BO43795 1136 aa19.03■□□□□ 0.64
CLDN11-208ENST00000488989 FGRP09769 529 aa19.03■□□□□ 0.64
CLDN11-208ENST00000488989 EPS15P42566 896 aa19.03■□□□□ 0.64
CLDN11-208ENST00000488989 HAND2P61296 217 aa19.03■□□□□ 0.64
CLDN11-208ENST00000488989 RABEP1Q15276 862 aa19.03■□□□□ 0.64
CLDN11-208ENST00000488989 ADCK5Q3MIX3 580 aa19.03■□□□□ 0.64
CLDN11-208ENST00000488989 STOX1Q6ZVD7 989 aa19.03■□□□□ 0.64
CLDN11-208ENST00000488989 ADARB2Q9NS39 739 aaKnown RBP19.03■□□□□ 0.64
CLDN11-208ENST00000488989 TMOD2Q9NZR1 351 aa19.03■□□□□ 0.64
CLDN11-208ENST00000488989 MYH8P13535 1937 aa19.03■□□□□ 0.64
CLDN11-208ENST00000488989 E7EWF7 191 aa19.02■□□□□ 0.64
CLDN11-208ENST00000488989 PCP11498 1178 aaKnown RBP19.02■□□□□ 0.64
CLDN11-208ENST00000488989 LMOD1P29536 600 aaPredicted RBP19.02■□□□□ 0.64
CLDN11-208ENST00000488989 TBC1D10BQ4KMP7 808 aaPredicted RBP19.02■□□□□ 0.64
CLDN11-208ENST00000488989 FAM83AQ86UY5 434 aa19.02■□□□□ 0.64
CLDN11-208ENST00000488989 TBC1D10CQ8IV04 446 aa19.02■□□□□ 0.64
CLDN11-208ENST00000488989 TRPM4Q8TD43 1214 aa19.02■□□□□ 0.64
CLDN11-208ENST00000488989 STAG1Q8WVM7 1258 aa19.02■□□□□ 0.64
CLDN11-208ENST00000488989 ATRNL1Q5VV63 1379 aa19.02■□□□□ 0.64
CLDN11-208ENST00000488989 MINDY4BA8MYZ0 360 aa19.01■□□□□ 0.63
CLDN11-208ENST00000488989 CYP2D6P10635 497 aa19.01■□□□□ 0.63
CLDN11-208ENST00000488989 PSMA5P28066 241 aa19.01■□□□□ 0.63
CLDN11-208ENST00000488989 CACNB3P54284 484 aa19.01■□□□□ 0.63
CLDN11-208ENST00000488989 PICALMQ13492 652 aa19.01■□□□□ 0.63
CLDN11-208ENST00000488989 AKNAD1Q5T1N1 836 aa19.01■□□□□ 0.63
CLDN11-208ENST00000488989 AMOTL1Q8IY63 956 aa19.01■□□□□ 0.63
CLDN11-208ENST00000488989 DHX36Q9H2U1 1008 aaKnown RBP19.01■□□□□ 0.63
CLDN11-208ENST00000488989 ZSWIM6Q9HCJ5 1215 aa19.01■□□□□ 0.63
CLDN11-208ENST00000488989 TAOK2Q9UL54 1235 aa19.01■□□□□ 0.63
CLDN11-208ENST00000488989 CYP2D7A0A087X1C5 515 aa19■□□□□ 0.63
CLDN11-208ENST00000488989 CLRN2A0PK11 232 aa19■□□□□ 0.63
CLDN11-208ENST00000488989 POLR3DP05423 398 aaPredicted RBP19■□□□□ 0.63
CLDN11-208ENST00000488989 HIRAP54198 1017 aaPredicted RBP19■□□□□ 0.63
CLDN11-208ENST00000488989 CTDSPL2Q05D32 466 aa19■□□□□ 0.63
CLDN11-208ENST00000488989 RBM26Q5T8P6 1007 aaKnown RBP19■□□□□ 0.63
CLDN11-208ENST00000488989 TTC6Q86TZ1 520 aa19■□□□□ 0.63
CLDN11-208ENST00000488989 FAM151AQ8WW52 585 aa19■□□□□ 0.63
CLDN11-208ENST00000488989 JAKMIP1Q96N16 626 aaKnown RBP19■□□□□ 0.63
CLDN11-208ENST00000488989 NEK1Q96PY6 1258 aa19■□□□□ 0.63
CLDN11-208ENST00000488989 RNF41Q9H4P4 317 aaPredicted RBP19■□□□□ 0.63
CLDN11-208ENST00000488989 SAP30BPQ9UHR5 308 aaKnown RBP19■□□□□ 0.63
CLDN11-208ENST00000488989 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19■□□□□ 0.63
CLDN11-208ENST00000488989 TACC3Q9Y6A5 838 aa19■□□□□ 0.63
CLDN11-208ENST00000488989 CNTNAP1P78357 1384 aa19■□□□□ 0.63
CLDN11-208ENST00000488989 SMIM22K7EJ46 135 aa18.99■□□□□ 0.63
CLDN11-208ENST00000488989 NT5C2P49902 561 aa18.99■□□□□ 0.63
CLDN11-208ENST00000488989 PLCD1P51178 756 aa18.99■□□□□ 0.63
CLDN11-208ENST00000488989 GABPAQ06546 454 aa18.99■□□□□ 0.63
CLDN11-208ENST00000488989 SH3BP5LQ7L8J4 393 aa18.99■□□□□ 0.63
CLDN11-208ENST00000488989 ZFPM1Q8IX07 1006 aa18.99■□□□□ 0.63
CLDN11-208ENST00000488989 HACL1Q9UJ83 578 aa18.99■□□□□ 0.63
CLDN11-208ENST00000488989 POTECB2RU33 542 aa18.98■□□□□ 0.63
CLDN11-208ENST00000488989 ORC4O43929 436 aa18.98■□□□□ 0.63
CLDN11-208ENST00000488989 SLC3A2P08195 630 aaKnown RBP18.98■□□□□ 0.63
CLDN11-208ENST00000488989 HMGB1P09429 215 aaKnown RBP18.98■□□□□ 0.63
CLDN11-208ENST00000488989 EVX2Q03828 476 aa18.98■□□□□ 0.63
CLDN11-208ENST00000488989 METTL16Q86W50 562 aaKnown RBP18.98■□□□□ 0.63
CLDN11-208ENST00000488989 NCOA7Q8NI08 942 aa18.98■□□□□ 0.63
CLDN11-208ENST00000488989 EHD4Q9H223 541 aa18.98■□□□□ 0.63
CLDN11-208ENST00000488989 CNNM2Q9H8M5 875 aa18.98■□□□□ 0.63
CLDN11-208ENST00000488989 PGAP2Q9UHJ9 254 aa18.98■□□□□ 0.63
CLDN11-208ENST00000488989 PITPNM2Q9BZ72 1349 aa18.98■□□□□ 0.63
CLDN11-208ENST00000488989 IQCA1LA6NCM1 817 aa18.97■□□□□ 0.63
CLDN11-208ENST00000488989 DDTLA6NHG4 134 aaPredicted RBP18.97■□□□□ 0.63
CLDN11-208ENST00000488989 TCP10L2B9ZVM9 353 aa18.97■□□□□ 0.63
CLDN11-208ENST00000488989 HLA-DOAP06340 250 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms