RNA–Protein interactions for RNA: ENST00000488931.1

CASQ2-202, Transcript of calsequestrin 2, humanhuman

TSL 3

Gene CASQ2, Length 220 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2-202ENST00000488931 COA7Q96BR5 231 aa13.22□□□□□ -0.29
CASQ2-202ENST00000488931 FAM84BQ96KN1 310 aaPredicted RBP13.22□□□□□ -0.29
CASQ2-202ENST00000488931 TMOD2Q9NZR1 351 aa13.22□□□□□ -0.29
CASQ2-202ENST00000488931 MYH2Q9UKX2 1941 aa13.21□□□□□ -0.29
CASQ2-202ENST00000488931 CHD9Q3L8U1 2897 aa13.21□□□□□ -0.29
CASQ2-202ENST00000488931 FOXO4P98177 505 aa13.21□□□□□ -0.29
CASQ2-202ENST00000488931 EPHA10Q5JZY3 1008 aa13.21□□□□□ -0.29
CASQ2-202ENST00000488931 NOL9Q5SY16 702 aaKnown RBP13.21□□□□□ -0.29
CASQ2-202ENST00000488931 ZFPM1Q8IX07 1006 aa13.21□□□□□ -0.29
CASQ2-202ENST00000488931 GJD2Q9UKL4 321 aa13.21□□□□□ -0.29
CASQ2-202ENST00000488931 ZHX2Q9Y6X8 837 aa13.21□□□□□ -0.29
CASQ2-202ENST00000488931 PLXNA1Q9UIW2 1896 aa13.21□□□□□ -0.3
CASQ2-202ENST00000488931 TRIM75PA6NK02 468 aa13.2□□□□□ -0.3
CASQ2-202ENST00000488931 ZNF853P0CG23 659 aa13.2□□□□□ -0.3
CASQ2-202ENST00000488931 CYP2B6P20813 491 aa13.2□□□□□ -0.3
CASQ2-202ENST00000488931 CCND3P30281 292 aaPredicted RBP13.2□□□□□ -0.3
CASQ2-202ENST00000488931 HIBADHP31937 336 aaKnown RBP13.2□□□□□ -0.3
CASQ2-202ENST00000488931 ATN1P54259 1190 aaPredicted RBP13.2□□□□□ -0.3
CASQ2-202ENST00000488931 NEXNQ0ZGT2 675 aa13.2□□□□□ -0.3
CASQ2-202ENST00000488931 ZDHHC15Q96MV8 337 aa13.2□□□□□ -0.3
CASQ2-202ENST00000488931 NECAB3Q96P71 396 aaPredicted RBP13.2□□□□□ -0.3
CASQ2-202ENST00000488931 LBHD1Q9BQE6 289 aaPredicted RBP13.2□□□□□ -0.3
CASQ2-202ENST00000488931 PUS3Q9BZE2 481 aaKnown RBP13.2□□□□□ -0.3
CASQ2-202ENST00000488931 GBF1Q92538 1859 aa13.2□□□□□ -0.3
CASQ2-202ENST00000488931 ATRNL1Q5VV63 1379 aa13.2□□□□□ -0.3
CASQ2-202ENST00000488931 CXCL11O14625 94 aa13.19□□□□□ -0.3
CASQ2-202ENST00000488931 PTPRAP18433 802 aa13.19□□□□□ -0.3
CASQ2-202ENST00000488931 IFIT5Q13325 482 aaKnown RBP13.19□□□□□ -0.3
CASQ2-202ENST00000488931 PPM1EQ8WY54 764 aa13.19□□□□□ -0.3
CASQ2-202ENST00000488931 AFG3L2Q9Y4W6 797 aa13.19□□□□□ -0.3
CASQ2-202ENST00000488931 CAPN2P17655 700 aa13.18□□□□□ -0.3
CASQ2-202ENST00000488931 GRIN2CQ14957 1233 aa13.18□□□□□ -0.3
CASQ2-202ENST00000488931 CCL14Q16627 93 aa13.18□□□□□ -0.3
CASQ2-202ENST00000488931 MAP3K21Q5TCX8 1036 aa13.18□□□□□ -0.3
CASQ2-202ENST00000488931 ADAMTS19Q8TE59 1207 aa13.18□□□□□ -0.3
CASQ2-202ENST00000488931 CNNM1Q9NRU3 951 aa13.18□□□□□ -0.3
CASQ2-202ENST00000488931 FAM198AQ9UFP1 575 aa13.18□□□□□ -0.3
CASQ2-202ENST00000488931 CHD7Q9P2D1 2997 aa13.18□□□□□ -0.3
CASQ2-202ENST00000488931 PHF20L1A8MW92 1017 aa13.17□□□□□ -0.3
CASQ2-202ENST00000488931 CACNB2Q08289 660 aaPredicted RBP13.17□□□□□ -0.3
CASQ2-202ENST00000488931 DIXDC1Q155Q3 683 aa13.17□□□□□ -0.3
CASQ2-202ENST00000488931 FAM110CQ1W6H9 321 aa13.17□□□□□ -0.3
CASQ2-202ENST00000488931 LHX8Q68G74 356 aa13.17□□□□□ -0.3
CASQ2-202ENST00000488931 LDHAL6AQ6ZMR3 332 aa13.17□□□□□ -0.3
CASQ2-202ENST00000488931 FASTKD5Q7L8L6 764 aaKnown RBP13.17□□□□□ -0.3
CASQ2-202ENST00000488931 SCYL3Q8IZE3 742 aa13.17□□□□□ -0.3
CASQ2-202ENST00000488931 FAM151AQ8WW52 585 aa13.17□□□□□ -0.3
CASQ2-202ENST00000488931 HOOK2Q96ED9 719 aa13.17□□□□□ -0.3
CASQ2-202ENST00000488931 SENP6Q9GZR1 1112 aaPredicted RBP13.17□□□□□ -0.3
CASQ2-202ENST00000488931 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
CASQ2-202ENST00000488931 HDLBPQ00341 1268 aaKnown RBP13.16□□□□□ -0.3
CASQ2-202ENST00000488931 FKBP1CQ5VVH2 108 aa13.16□□□□□ -0.3
CASQ2-202ENST00000488931 CCDC30Q5VVM6 783 aa13.16□□□□□ -0.3
CASQ2-202ENST00000488931 CDC42EP5Q6NZY7 148 aa13.16□□□□□ -0.3
CASQ2-202ENST00000488931 LMBR1LQ6UX01 489 aa13.16□□□□□ -0.3
CASQ2-202ENST00000488931 AGTPBP1Q9UPW5 1226 aa13.16□□□□□ -0.3
CASQ2-202ENST00000488931 RTP1P59025 263 aa13.15□□□□□ -0.3
CASQ2-202ENST00000488931 TAF7LQ5H9L4 462 aa13.15□□□□□ -0.3
CASQ2-202ENST00000488931 BADQ92934 168 aa13.15□□□□□ -0.3
CASQ2-202ENST00000488931 PRDM5Q9NQX1 630 aaPredicted RBP13.15□□□□□ -0.3
CASQ2-202ENST00000488931 DAGLAQ9Y4D2 1042 aa13.15□□□□□ -0.3
CASQ2-202ENST00000488931 FAM196BA6NMK8 535 aa13.14□□□□□ -0.31
CASQ2-202ENST00000488931 UBE4AQ14139 1066 aa13.14□□□□□ -0.31
CASQ2-202ENST00000488931 SH3BP5LQ7L8J4 393 aa13.14□□□□□ -0.31
CASQ2-202ENST00000488931 SH3RF1Q7Z6J0 888 aa13.14□□□□□ -0.31
CASQ2-202ENST00000488931 FBXO33Q7Z6M2 555 aa13.14□□□□□ -0.31
CASQ2-202ENST00000488931 TSR2Q969E8 191 aaKnown RBP13.14□□□□□ -0.31
CASQ2-202ENST00000488931 RUNDC1Q96C34 613 aa13.14□□□□□ -0.31
CASQ2-202ENST00000488931 UHRF1Q96T88 793 aaPredicted RBP13.14□□□□□ -0.31
CASQ2-202ENST00000488931 PICK1Q9NRD5 415 aa13.14□□□□□ -0.31
CASQ2-202ENST00000488931 ATP11BQ9Y2G3 1177 aa13.14□□□□□ -0.31
CASQ2-202ENST00000488931 SLC45A1Q9Y2W3 748 aa13.14□□□□□ -0.31
CASQ2-202ENST00000488931 CACNA1FO60840 1977 aa13.14□□□□□ -0.31
CASQ2-202ENST00000488931 SIPA1L1O43166 1804 aa13.13□□□□□ -0.31
CASQ2-202ENST00000488931 FRAT2O75474 233 aaPredicted RBP13.13□□□□□ -0.31
CASQ2-202ENST00000488931 EPHB4P54760 987 aa13.13□□□□□ -0.31
CASQ2-202ENST00000488931 SMAD3P84022 425 aaKnown RBP13.13□□□□□ -0.31
CASQ2-202ENST00000488931 POTEEQ6S8J3 1075 aa13.13□□□□□ -0.31
CASQ2-202ENST00000488931 CCER1Q8TC90 406 aaPredicted RBP13.13□□□□□ -0.31
CASQ2-202ENST00000488931 IFT57Q9NWB7 429 aa13.13□□□□□ -0.31
CASQ2-202ENST00000488931 MUC6Q6W4X9 2439 aa13.13□□□□□ -0.31
CASQ2-202ENST00000488931 VPS37DQ86XT2 251 aa13.12□□□□□ -0.31
CASQ2-202ENST00000488931 ASB2Q96Q27 587 aa13.12□□□□□ -0.31
CASQ2-202ENST00000488931 ASCC2Q9H1I8 757 aaPredicted RBP13.12□□□□□ -0.31
CASQ2-202ENST00000488931 SYNGAP1Q96PV0 1343 aa13.12□□□□□ -0.31
CASQ2-202ENST00000488931 ZKSCAN1P17029 563 aaPredicted RBP13.11□□□□□ -0.31
CASQ2-202ENST00000488931 ITGB8P26012 769 aa13.11□□□□□ -0.31
CASQ2-202ENST00000488931 CCDC85BQ15834 202 aaPredicted RBP13.11□□□□□ -0.31
CASQ2-202ENST00000488931 CCDC57Q2TAC2 916 aa13.11□□□□□ -0.31
CASQ2-202ENST00000488931 HHIPL2Q6UWX4 724 aa13.11□□□□□ -0.31
CASQ2-202ENST00000488931 DNAAF4Q8WXU2 420 aa13.11□□□□□ -0.31
CASQ2-202ENST00000488931 MYH16Q9H6N6 1097 aa13.11□□□□□ -0.31
CASQ2-202ENST00000488931 TXNRD2Q9NNW7 524 aa13.11□□□□□ -0.31
CASQ2-202ENST00000488931 RFX7Q2KHR2 1363 aa13.1□□□□□ -0.31
CASQ2-202ENST00000488931 DDTLA6NHG4 134 aaPredicted RBP13.1□□□□□ -0.31
CASQ2-202ENST00000488931 F6X3S4 739 aa13.1□□□□□ -0.31
CASQ2-202ENST00000488931 PRDX5P30044 214 aa13.1□□□□□ -0.31
CASQ2-202ENST00000488931 RGS3P49796 1198 aa13.1□□□□□ -0.31
CASQ2-202ENST00000488931 HMGCS2P54868 508 aa13.1□□□□□ -0.31
CASQ2-202ENST00000488931 FLIIQ13045 1269 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms