RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 IFNL3Q8IZI9 196 aa14.69□□□□□ -0.06
CLIC4-202ENST00000488683 IGDCC4Q8TDY8 1250 aa14.69□□□□□ -0.06
CLIC4-202ENST00000488683 MRFAP1L1Q96HT8 127 aa14.69□□□□□ -0.06
CLIC4-202ENST00000488683 ABCF2Q9UG63 623 aa14.69□□□□□ -0.06
CLIC4-202ENST00000488683 FAM205CA6NFA0 338 aa14.69□□□□□ -0.06
CLIC4-202ENST00000488683 NR5A1Q13285 461 aa14.69□□□□□ -0.06
CLIC4-202ENST00000488683 ZRSR1Q15695 479 aaKnown RBP14.69□□□□□ -0.06
CLIC4-202ENST00000488683 BICDL1Q6ZP65 573 aa14.69□□□□□ -0.06
CLIC4-202ENST00000488683 ZNF34Q8IZ26 560 aa14.69□□□□□ -0.06
CLIC4-202ENST00000488683 PDILTQ8N807 584 aa14.69□□□□□ -0.06
CLIC4-202ENST00000488683 KCNG4Q8TDN1 519 aa14.69□□□□□ -0.06
CLIC4-202ENST00000488683 NAPBQ9H115 298 aa14.69□□□□□ -0.06
CLIC4-202ENST00000488683 ARAP2Q8WZ64 1704 aa14.68□□□□□ -0.06
CLIC4-202ENST00000488683 MINDY4BA8MYZ0 360 aa14.68□□□□□ -0.06
CLIC4-202ENST00000488683 ZBTB43O43298 467 aa14.68□□□□□ -0.06
CLIC4-202ENST00000488683 PRDM1O75626 825 aa14.68□□□□□ -0.06
CLIC4-202ENST00000488683 PUM3Q15397 648 aaKnown RBP14.68□□□□□ -0.06
CLIC4-202ENST00000488683 BRAPQ7Z569 592 aa14.68□□□□□ -0.06
CLIC4-202ENST00000488683 TMX1Q9H3N1 280 aa14.68□□□□□ -0.06
CLIC4-202ENST00000488683 EP400Q96L91 3159 aa14.68□□□□□ -0.06
CLIC4-202ENST00000488683 LONRF3Q496Y0 759 aa14.68□□□□□ -0.06
CLIC4-202ENST00000488683 C3orf67Q6ZVT6 689 aa14.68□□□□□ -0.06
CLIC4-202ENST00000488683 LRRN4CLQ8ND94 238 aa14.68□□□□□ -0.06
CLIC4-202ENST00000488683 OXER1Q8TDS5 423 aa14.68□□□□□ -0.06
CLIC4-202ENST00000488683 MPHOSPH8Q99549 860 aa14.68□□□□□ -0.06
CLIC4-202ENST00000488683 DOCK2Q92608 1830 aa14.68□□□□□ -0.06
CLIC4-202ENST00000488683 NCBP1Q09161 790 aaKnown RBP14.67□□□□□ -0.06
CLIC4-202ENST00000488683 NTRK3Q16288 839 aa14.67□□□□□ -0.06
CLIC4-202ENST00000488683 ARMCX5Q6P1M9 558 aa14.67□□□□□ -0.06
CLIC4-202ENST00000488683 FOXP4Q8IVH2 680 aaPredicted RBP14.67□□□□□ -0.06
CLIC4-202ENST00000488683 LPIN2Q92539 896 aa14.67□□□□□ -0.06
CLIC4-202ENST00000488683 MAP7D2Q96T17 732 aa14.67□□□□□ -0.06
CLIC4-202ENST00000488683 SLC4A4Q9Y6R1 1079 aa14.67□□□□□ -0.06
CLIC4-202ENST00000488683 DOT1LQ8TEK3 1739 aa14.67□□□□□ -0.06
CLIC4-202ENST00000488683 GSG1L2A8MUP6 293 aa14.67□□□□□ -0.06
CLIC4-202ENST00000488683 TMEM232C9JQI7 657 aa14.67□□□□□ -0.06
CLIC4-202ENST00000488683 COBLO75128 1261 aa14.67□□□□□ -0.06
CLIC4-202ENST00000488683 CASP1P29466 404 aa14.67□□□□□ -0.06
CLIC4-202ENST00000488683 IARSP41252 1262 aaKnown RBP14.67□□□□□ -0.06
CLIC4-202ENST00000488683 GYG1P46976 350 aa14.67□□□□□ -0.06
CLIC4-202ENST00000488683 TDO2P48775 406 aa14.67□□□□□ -0.06
CLIC4-202ENST00000488683 CEP135Q66GS9 1140 aa14.67□□□□□ -0.06
CLIC4-202ENST00000488683 USP49Q70CQ1 688 aa14.67□□□□□ -0.06
CLIC4-202ENST00000488683 IL6STP40189 918 aaPredicted RBP14.66□□□□□ -0.06
CLIC4-202ENST00000488683 SYKP43405 635 aa14.66□□□□□ -0.06
CLIC4-202ENST00000488683 PDE4BQ07343 736 aa14.66□□□□□ -0.06
CLIC4-202ENST00000488683 PDCL2Q8N4E4 241 aa14.66□□□□□ -0.06
CLIC4-202ENST00000488683 ERVV-1B6SEH8 477 aa14.66□□□□□ -0.06
CLIC4-202ENST00000488683 EXOC5O00471 708 aa14.66□□□□□ -0.06
CLIC4-202ENST00000488683 ATP6V1AP38606 617 aa14.66□□□□□ -0.06
CLIC4-202ENST00000488683 NCAPHQ15003 741 aa14.66□□□□□ -0.06
CLIC4-202ENST00000488683 NOM1Q5C9Z4 860 aaKnown RBP14.66□□□□□ -0.06
CLIC4-202ENST00000488683 HSD3B7Q9H2F3 369 aa14.66□□□□□ -0.06
CLIC4-202ENST00000488683 SLC12A7Q9Y666 1083 aa14.66□□□□□ -0.06
CLIC4-202ENST00000488683 KCNQ2O43526 872 aa14.65□□□□□ -0.06
CLIC4-202ENST00000488683 UQCRFS1P1P0C7P4 283 aa14.65□□□□□ -0.06
CLIC4-202ENST00000488683 PRR29P0C7W0 189 aa14.65□□□□□ -0.06
CLIC4-202ENST00000488683 MROH5Q6ZUA9 1318 aa14.65□□□□□ -0.06
CLIC4-202ENST00000488683 SLC39A14Q15043 492 aa14.65□□□□□ -0.06
CLIC4-202ENST00000488683 PTPAQ15257 358 aa14.65□□□□□ -0.06
CLIC4-202ENST00000488683 TRMT44Q8IYL2 757 aaKnown RBP14.65□□□□□ -0.06
CLIC4-202ENST00000488683 PKNOX2Q96KN3 472 aa14.65□□□□□ -0.06
CLIC4-202ENST00000488683 MAP3K14Q99558 947 aa14.65□□□□□ -0.06
CLIC4-202ENST00000488683 LRP2BPQ9P2M1 347 aa14.65□□□□□ -0.06
CLIC4-202ENST00000488683 CMA1P23946 247 aa14.65□□□□□ -0.07
CLIC4-202ENST00000488683 CRKLP46109 303 aaKnown RBP14.65□□□□□ -0.07
CLIC4-202ENST00000488683 TOB1P50616 345 aaPredicted RBP14.65□□□□□ -0.07
CLIC4-202ENST00000488683 DYNLL1P63167 89 aaKnown RBP14.65□□□□□ -0.07
CLIC4-202ENST00000488683 ITPK1Q13572 414 aa14.65□□□□□ -0.07
CLIC4-202ENST00000488683 INTS5Q6P9B9 1019 aaKnown RBP14.65□□□□□ -0.07
CLIC4-202ENST00000488683 METTL16Q86W50 562 aaKnown RBP14.65□□□□□ -0.07
CLIC4-202ENST00000488683 ZBTB9Q96C00 473 aa14.65□□□□□ -0.07
CLIC4-202ENST00000488683 SHISA4Q96DD7 197 aa14.65□□□□□ -0.07
CLIC4-202ENST00000488683 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.65□□□□□ -0.07
CLIC4-202ENST00000488683 CCDC94Q9BW85 323 aaPredicted RBP14.65□□□□□ -0.07
CLIC4-202ENST00000488683 NIP7Q9Y221 180 aaKnown RBP eCLIP14.65□□□□□ -0.07
CLIC4-202ENST00000488683 MYH14Q7Z406 1995 aaKnown RBP14.64□□□□□ -0.07
CLIC4-202ENST00000488683 PATL2C9JE40 543 aaKnown RBP14.64□□□□□ -0.07
CLIC4-202ENST00000488683 BMP6P22004 513 aa14.64□□□□□ -0.07
CLIC4-202ENST00000488683 EIF5P55010 431 aaKnown RBP14.64□□□□□ -0.07
CLIC4-202ENST00000488683 FAM177A1Q8N128 213 aaPredicted RBP14.64□□□□□ -0.07
CLIC4-202ENST00000488683 PCDHB6Q9Y5E3 794 aa14.64□□□□□ -0.07
CLIC4-202ENST00000488683 WNT7AO00755 349 aa14.64□□□□□ -0.07
CLIC4-202ENST00000488683 KLRK1P26718 216 aa14.64□□□□□ -0.07
CLIC4-202ENST00000488683 SGMS1Q86VZ5 419 aa14.64□□□□□ -0.07
CLIC4-202ENST00000488683 CCDC112Q8NEF3 446 aa14.64□□□□□ -0.07
CLIC4-202ENST00000488683 TMEM87BQ96K49 555 aa14.64□□□□□ -0.07
CLIC4-202ENST00000488683 ZNF215Q9UL58 517 aaPredicted RBP14.64□□□□□ -0.07
CLIC4-202ENST00000488683 COL14A1Q05707 1796 aaKnown RBP14.63□□□□□ -0.07
CLIC4-202ENST00000488683 COL16A1Q07092 1604 aaPredicted RBP14.63□□□□□ -0.07
CLIC4-202ENST00000488683 PHLPP1O60346 1717 aa14.63□□□□□ -0.07
CLIC4-202ENST00000488683 NUTM2BA6NNL0 878 aaPredicted RBP14.63□□□□□ -0.07
CLIC4-202ENST00000488683 NUTM2EB1AL46 878 aaPredicted RBP14.63□□□□□ -0.07
CLIC4-202ENST00000488683 SLC5A1P13866 664 aa14.63□□□□□ -0.07
CLIC4-202ENST00000488683 NLRP12P59046 1061 aa14.63□□□□□ -0.07
CLIC4-202ENST00000488683 PTPN14Q15678 1187 aa14.63□□□□□ -0.07
CLIC4-202ENST00000488683 EARS2Q5JPH6 523 aaKnown RBP14.63□□□□□ -0.07
CLIC4-202ENST00000488683 MFSD6Q6ZSS7 791 aa14.63□□□□□ -0.07
CLIC4-202ENST00000488683 PTF1AQ7RTS3 328 aa14.63□□□□□ -0.07
CLIC4-202ENST00000488683 NUTM2AQ8IVF1 878 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms