RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, human

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF38-208	ENST00000488058	NDUFB9	Q9Y6M9	179 aa		28.98	■■■□□ 2.23
RNF38-208	ENST00000488058	IFIT2	P09913	472 aa	Known RBP	28.97	■■■□□ 2.23
RNF38-208	ENST00000488058	RRP1	P56182	461 aa	Known RBP	28.97	■■■□□ 2.23
RNF38-208	ENST00000488058	INHBE	P58166	350 aa		28.97	■■■□□ 2.23
RNF38-208	ENST00000488058	SNCAIP	Q9Y6H5	919 aa		28.97	■■■□□ 2.23
RNF38-208	ENST00000488058	INPP5B	P32019	993 aa		28.96	■■■□□ 2.23
RNF38-208	ENST00000488058	IFNL1	Q8IU54	200 aa		28.96	■■■□□ 2.23
RNF38-208	ENST00000488058	IDH1	O75874	414 aa	Known RBP	28.95	■■■□□ 2.22
RNF38-208	ENST00000488058	TEX11	Q8IYF3	940 aa		28.95	■■■□□ 2.22
RNF38-208	ENST00000488058	AATF	Q9NY61	560 aa	Known RBP eCLIP	28.95	■■■□□ 2.22
RNF38-208	ENST00000488058	SPDYE5	A6NIY4	337 aa		28.94	■■■□□ 2.22
RNF38-208	ENST00000488058	IGF2BP3	O00425	579 aa	Known RBP eCLIP	28.94	■■■□□ 2.22
RNF38-208	ENST00000488058	ALDH1A1	P00352	501 aa		28.94	■■■□□ 2.22
RNF38-208	ENST00000488058	DGKZ	Q13574	1117 aa		28.94	■■■□□ 2.22
RNF38-208	ENST00000488058	SH3BP5L	Q7L8J4	393 aa		28.94	■■■□□ 2.22
RNF38-208	ENST00000488058	DDTL	A6NHG4	134 aa	Predicted RBP	28.93	■■■□□ 2.22
RNF38-208	ENST00000488058	BAG3	O95817	575 aa		28.93	■■■□□ 2.22
RNF38-208	ENST00000488058	ERO1B	Q86YB8	467 aa		28.93	■■■□□ 2.22
RNF38-208	ENST00000488058	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	28.93	■■■□□ 2.22
RNF38-208	ENST00000488058	ANTXR1	Q9H6X2	564 aa		28.93	■■■□□ 2.22
RNF38-208	ENST00000488058	MAP4K4	O95819	1239 aa	Predicted RBP	28.92	■■■□□ 2.22
RNF38-208	ENST00000488058	OTUD7B	Q6GQQ9	843 aa		28.92	■■■□□ 2.22
RNF38-208	ENST00000488058	ADGRA1	Q86SQ6	560 aa		28.92	■■■□□ 2.22
RNF38-208	ENST00000488058	CYP7A1	P22680	504 aa		28.91	■■■□□ 2.22
RNF38-208	ENST00000488058	GTF2A2	P52657	109 aa		28.91	■■■□□ 2.22
RNF38-208	ENST00000488058	CCL15-CCL14	A0A0B4J2E2	113 aa		28.9	■■■□□ 2.22
RNF38-208	ENST00000488058	CCL15	Q16663	113 aa		28.9	■■■□□ 2.22
RNF38-208	ENST00000488058	ABHD8	Q96I13	439 aa		28.9	■■■□□ 2.22
RNF38-208	ENST00000488058	MS4A4A	Q96JQ5	239 aa		28.9	■■■□□ 2.22
RNF38-208	ENST00000488058	LRRCC1	Q9C099	1032 aa		28.9	■■■□□ 2.22
RNF38-208	ENST00000488058	MCOLN1	Q9GZU1	580 aa		28.9	■■■□□ 2.22
RNF38-208	ENST00000488058	R3HDML	Q9H3Y0	253 aa		28.9	■■■□□ 2.22
RNF38-208	ENST00000488058	ZNF112	Q9UJU3	913 aa		28.9	■■■□□ 2.22
RNF38-208	ENST00000488058	ATRNL1	Q5VV63	1379 aa		28.89	■■■□□ 2.22
RNF38-208	ENST00000488058	GPR25	O00155	361 aa		28.89	■■■□□ 2.22
RNF38-208	ENST00000488058	SLURP2	P0DP57	97 aa		28.89	■■■□□ 2.22
RNF38-208	ENST00000488058	PLCG2	P16885	1265 aa		28.89	■■■□□ 2.22
RNF38-208	ENST00000488058	MAGEB6	Q8N7X4	407 aa		28.89	■■■□□ 2.22
RNF38-208	ENST00000488058	ZNF296	Q8WUU4	475 aa	Predicted RBP	28.89	■■■□□ 2.22
RNF38-208	ENST00000488058	DNAJC2	Q99543	621 aa	Known RBP	28.89	■■■□□ 2.22
RNF38-208	ENST00000488058	PTPN18	Q99952	460 aa		28.89	■■■□□ 2.22
RNF38-208	ENST00000488058	OSBPL5	Q9H0X9	879 aa	Predicted RBP	28.89	■■■□□ 2.22
RNF38-208	ENST00000488058	TESPA1	A2RU30	521 aa	Predicted RBP	28.88	■■■□□ 2.21
RNF38-208	ENST00000488058	SMARCA5	O60264	1052 aa	Predicted RBP	28.88	■■■□□ 2.21
RNF38-208	ENST00000488058	NPM3	O75607	178 aa	Known RBP	28.88	■■■□□ 2.21
RNF38-208	ENST00000488058	MAP3K12	Q12852	859 aa		28.88	■■■□□ 2.21
RNF38-208	ENST00000488058	BRI3BP	Q8WY22	251 aa		28.88	■■■□□ 2.21
RNF38-208	ENST00000488058	CDK5RAP2	Q96SN8	1893 aa		28.87	■■■□□ 2.21
RNF38-208	ENST00000488058	IRF6	O14896	467 aa		28.87	■■■□□ 2.21
RNF38-208	ENST00000488058	IGSF3	O75054	1194 aa		28.87	■■■□□ 2.21
RNF38-208	ENST00000488058	PPIL2	Q13356	520 aa		28.87	■■■□□ 2.21
RNF38-208	ENST00000488058	CFHR5	Q9BXR6	569 aa		28.87	■■■□□ 2.21
RNF38-208	ENST00000488058	PPP4C	P60510	307 aa		28.86	■■■□□ 2.21
RNF38-208	ENST00000488058	DYNLL1	P63167	89 aa	Known RBP	28.86	■■■□□ 2.21
RNF38-208	ENST00000488058	PPAT	Q06203	517 aa		28.86	■■■□□ 2.21
RNF38-208	ENST00000488058	TTF1	Q15361	905 aa	Predicted RBP	28.86	■■■□□ 2.21
RNF38-208	ENST00000488058	NOL9	Q5SY16	702 aa	Known RBP	28.86	■■■□□ 2.21
RNF38-208	ENST00000488058	MAPKAPK5	Q8IW41	473 aa		28.86	■■■□□ 2.21
RNF38-208	ENST00000488058	MIGA1	Q8NAN2	632 aa		28.86	■■■□□ 2.21
RNF38-208	ENST00000488058	TGFBRAP1	Q8WUH2	860 aa		28.86	■■■□□ 2.21
RNF38-208	ENST00000488058	FAM196B	A6NMK8	535 aa		28.85	■■■□□ 2.21
RNF38-208	ENST00000488058	GOLIM4	O00461	696 aa		28.85	■■■□□ 2.21
RNF38-208	ENST00000488058	CETP	P11597	493 aa		28.85	■■■□□ 2.21
RNF38-208	ENST00000488058	SNAPC2	Q13487	334 aa		28.85	■■■□□ 2.21
RNF38-208	ENST00000488058	CRBN	Q96SW2	442 aa		28.85	■■■□□ 2.21
RNF38-208	ENST00000488058	PHF20L1	A8MW92	1017 aa		28.84	■■■□□ 2.21
RNF38-208	ENST00000488058	FKTN	O75072	461 aa		28.84	■■■□□ 2.21
RNF38-208	ENST00000488058	CRHR2	Q13324	411 aa		28.84	■■■□□ 2.21
RNF38-208	ENST00000488058	SCYL3	Q8IZE3	742 aa		28.84	■■■□□ 2.21
RNF38-208	ENST00000488058	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	28.84	■■■□□ 2.21
RNF38-208	ENST00000488058	BOLA2	Q9H3K6	86 aa		28.84	■■■□□ 2.21
RNF38-208	ENST00000488058	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	28.84	■■■□□ 2.21
RNF38-208	ENST00000488058	PICK1	Q9NRD5	415 aa		28.84	■■■□□ 2.21
RNF38-208	ENST00000488058	FOCAD	Q5VW36	1801 aa		28.84	■■■□□ 2.21
RNF38-208	ENST00000488058	COL2A1	P02458	1487 aa	Predicted RBP	28.84	■■■□□ 2.21
RNF38-208	ENST00000488058	DOCK1	Q14185	1865 aa		28.83	■■■□□ 2.21
RNF38-208	ENST00000488058	CTU1	Q7Z7A3	348 aa	Known RBP	28.83	■■■□□ 2.21
RNF38-208	ENST00000488058	PCDHB15	Q9Y5E8	787 aa		28.83	■■■□□ 2.21
RNF38-208	ENST00000488058	TAF1C	Q15572	869 aa	Predicted RBP	28.82	■■■□□ 2.2
RNF38-208	ENST00000488058	NOM1	Q5C9Z4	860 aa	Known RBP	28.82	■■■□□ 2.2
RNF38-208	ENST00000488058	FAM43A	Q8N2R8	423 aa		28.82	■■■□□ 2.2
RNF38-208	ENST00000488058	EDC3	Q96F86	508 aa	Known RBP	28.82	■■■□□ 2.2
RNF38-208	ENST00000488058	DCTPP1	Q9H773	170 aa		28.82	■■■□□ 2.2
RNF38-208	ENST00000488058	FLT1	P17948	1338 aa		28.82	■■■□□ 2.2
RNF38-208	ENST00000488058	MAP3K10	Q02779	954 aa		28.81	■■■□□ 2.2
RNF38-208	ENST00000488058	CCDC85C	A6NKD9	419 aa		28.8	■■■□□ 2.2
RNF38-208	ENST00000488058	SAP30BP	Q9UHR5	308 aa	Known RBP	28.8	■■■□□ 2.2
RNF38-208	ENST00000488058	TBC1D12	O60347	775 aa		28.79	■■■□□ 2.2
RNF38-208	ENST00000488058	CTNND1	O60716	968 aa	Known RBP	28.79	■■■□□ 2.2
RNF38-208	ENST00000488058	ATP5J	P18859	108 aa		28.79	■■■□□ 2.2
RNF38-208	ENST00000488058	USP5	P45974	858 aa		28.79	■■■□□ 2.2
RNF38-208	ENST00000488058	SLC9C2	Q5TAH2	1124 aa		28.79	■■■□□ 2.2
RNF38-208	ENST00000488058	DHX36	Q9H2U1	1008 aa	Known RBP	28.79	■■■□□ 2.2
RNF38-208	ENST00000488058	PAG1	Q9NWQ8	432 aa		28.79	■■■□□ 2.2
RNF38-208	ENST00000488058	BTBD19	C9JJ37	291 aa		28.78	■■■□□ 2.2
RNF38-208	ENST00000488058	PDE6A	P16499	860 aa		28.78	■■■□□ 2.2
RNF38-208	ENST00000488058	SLC4A8	Q2Y0W8	1093 aa		28.78	■■■□□ 2.2
RNF38-208	ENST00000488058	ZFYVE28	Q9HCC9	887 aa		28.78	■■■□□ 2.2
RNF38-208	ENST00000488058	PI4KB	Q9UBF8	816 aa		28.78	■■■□□ 2.2
RNF38-208	ENST00000488058	PALD1	Q9ULE6	856 aa		28.78	■■■□□ 2.2

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