RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 MUC3AQ02505 3323 aa20.62■□□□□ 0.89
TOM1-214ENST00000487670 A0A0G2JLL6 359 aaPredicted RBP20.61■□□□□ 0.89
TOM1-214ENST00000487670 FRAT2O75474 233 aaPredicted RBP20.61■□□□□ 0.89
TOM1-214ENST00000487670 GADL1Q6ZQY3 521 aa20.61■□□□□ 0.89
TOM1-214ENST00000487670 PRRT2Q7Z6L0 340 aaPredicted RBP20.61■□□□□ 0.89
TOM1-214ENST00000487670 TBC1D22AQ8WUA7 517 aa20.61■□□□□ 0.89
TOM1-214ENST00000487670 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.61■□□□□ 0.89
TOM1-214ENST00000487670 LTBP2Q14767 1821 aa20.6■□□□□ 0.89
TOM1-214ENST00000487670 PHF20L1A8MW92 1017 aa20.6■□□□□ 0.89
TOM1-214ENST00000487670 TNPO2O14787 897 aaKnown RBP20.6■□□□□ 0.89
TOM1-214ENST00000487670 HHIPL2Q6UWX4 724 aa20.6■□□□□ 0.89
TOM1-214ENST00000487670 PXYLP1Q8TE99 480 aa20.6■□□□□ 0.89
TOM1-214ENST00000487670 HOOK2Q96ED9 719 aa20.6■□□□□ 0.89
TOM1-214ENST00000487670 MROH5Q6ZUA9 1318 aa20.59■□□□□ 0.89
TOM1-214ENST00000487670 NBPF7P0C2Y1 421 aaPredicted RBP20.59■□□□□ 0.89
TOM1-214ENST00000487670 IRF5Q13568 498 aa20.59■□□□□ 0.89
TOM1-214ENST00000487670 METTL24Q5JXM2 366 aa20.59■□□□□ 0.89
TOM1-214ENST00000487670 NECAB2Q7Z6G3 386 aa20.59■□□□□ 0.89
TOM1-214ENST00000487670 SIPA1L1O43166 1804 aa20.58■□□□□ 0.89
TOM1-214ENST00000487670 CXCL11O14625 94 aa20.58■□□□□ 0.89
TOM1-214ENST00000487670 EXOSC9Q06265 439 aaKnown RBP20.58■□□□□ 0.89
TOM1-214ENST00000487670 LRIT3Q3SXY7 679 aa20.58■□□□□ 0.89
TOM1-214ENST00000487670 GPR153Q6NV75 609 aa20.58■□□□□ 0.89
TOM1-214ENST00000487670 MRIQ9BWK5 157 aa20.58■□□□□ 0.89
TOM1-214ENST00000487670 BICC1Q9H694 974 aaKnown RBP20.58■□□□□ 0.89
TOM1-214ENST00000487670 C9orf78Q9NZ63 289 aaPredicted RBP20.58■□□□□ 0.89
TOM1-214ENST00000487670 ZHX2Q9Y6X8 837 aa20.58■□□□□ 0.89
TOM1-214ENST00000487670 PTPRAP18433 802 aa20.57■□□□□ 0.88
TOM1-214ENST00000487670 PRDX5P30044 214 aa20.57■□□□□ 0.88
TOM1-214ENST00000487670 SH3BP5LQ7L8J4 393 aa20.57■□□□□ 0.88
TOM1-214ENST00000487670 TDHQ8IZJ6 230 aa20.57■□□□□ 0.88
TOM1-214ENST00000487670 ANKRD13CQ8N6S4 541 aa20.57■□□□□ 0.88
TOM1-214ENST00000487670 ANKRD44Q8N8A2 993 aa20.57■□□□□ 0.88
TOM1-214ENST00000487670 AFG3L2Q9Y4W6 797 aa20.57■□□□□ 0.88
TOM1-214ENST00000487670 PFASO15067 1338 aa20.56■□□□□ 0.88
TOM1-214ENST00000487670 MAST3O60307 1309 aa20.56■□□□□ 0.88
TOM1-214ENST00000487670 CAVIN4Q5BKX8 364 aa20.56■□□□□ 0.88
TOM1-214ENST00000487670 TREML2Q5T2D2 321 aa20.56■□□□□ 0.88
TOM1-214ENST00000487670 SLC4A10Q6U841 1118 aa20.56■□□□□ 0.88
TOM1-214ENST00000487670 GUCD1Q96NT3 240 aa20.56■□□□□ 0.88
TOM1-214ENST00000487670 RFX7Q2KHR2 1363 aa20.56■□□□□ 0.88
TOM1-214ENST00000487670 CDK5RAP2Q96SN8 1893 aa20.56■□□□□ 0.88
TOM1-214ENST00000487670 COL2A1P02458 1487 aaPredicted RBP20.56■□□□□ 0.88
TOM1-214ENST00000487670 PDE8BO95263 885 aa20.55■□□□□ 0.88
TOM1-214ENST00000487670 FGFR2P21802 821 aa20.55■□□□□ 0.88
TOM1-214ENST00000487670 CCDC27Q2M243 656 aa20.55■□□□□ 0.88
TOM1-214ENST00000487670 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.55■□□□□ 0.88
TOM1-214ENST00000487670 SCYL3Q8IZE3 742 aa20.55■□□□□ 0.88
TOM1-214ENST00000487670 TRIM75PA6NK02 468 aa20.53■□□□□ 0.88
TOM1-214ENST00000487670 PEX10O60683 326 aa20.53■□□□□ 0.88
TOM1-214ENST00000487670 SMCR8Q8TEV9 937 aaPredicted RBP20.53■□□□□ 0.88
TOM1-214ENST00000487670 FAM161BQ96MY7 647 aa20.53■□□□□ 0.88
TOM1-214ENST00000487670 UBE2OQ9C0C9 1292 aaKnown RBP20.53■□□□□ 0.88
TOM1-214ENST00000487670 SUGT1Q9Y2Z0 365 aa20.53■□□□□ 0.88
TOM1-214ENST00000487670 IL16Q14005 1332 aa20.53■□□□□ 0.88
TOM1-214ENST00000487670 RGS3P49796 1198 aa20.52■□□□□ 0.88
TOM1-214ENST00000487670 RABL6Q3YEC7 729 aaPredicted RBP20.52■□□□□ 0.88
TOM1-214ENST00000487670 FASTKD5Q7L8L6 764 aaKnown RBP20.52■□□□□ 0.88
TOM1-214ENST00000487670 USP40Q9NVE5 1235 aa20.52■□□□□ 0.88
TOM1-214ENST00000487670 DDTLA6NHG4 134 aaPredicted RBP20.51■□□□□ 0.87
TOM1-214ENST00000487670 ALDH1L1O75891 902 aa20.51■□□□□ 0.87
TOM1-214ENST00000487670 HMGCRP04035 888 aa20.51■□□□□ 0.87
TOM1-214ENST00000487670 SRCIN1Q9C0H9 1055 aa20.51■□□□□ 0.87
TOM1-214ENST00000487670 NBPF3Q9H094 633 aa20.51■□□□□ 0.87
TOM1-214ENST00000487670 C11orf49Q9H6J7 331 aa20.51■□□□□ 0.87
TOM1-214ENST00000487670 DDX4Q9NQI0 724 aaKnown RBP20.51■□□□□ 0.87
TOM1-214ENST00000487670 SALL2Q9Y467 1007 aaPredicted RBP20.51■□□□□ 0.87
TOM1-214ENST00000487670 FAM196BA6NMK8 535 aa20.5■□□□□ 0.87
TOM1-214ENST00000487670 MDM2Q00987 491 aaPredicted RBP20.5■□□□□ 0.87
TOM1-214ENST00000487670 ANKLE1Q8NAG6 615 aa20.5■□□□□ 0.87
TOM1-214ENST00000487670 TRIB2Q92519 343 aa20.5■□□□□ 0.87
TOM1-214ENST00000487670 COA7Q96BR5 231 aa20.5■□□□□ 0.87
TOM1-214ENST00000487670 PICK1Q9NRD5 415 aa20.5■□□□□ 0.87
TOM1-214ENST00000487670 GJD2Q9UKL4 321 aa20.5■□□□□ 0.87
TOM1-214ENST00000487670 AGTPBP1Q9UPW5 1226 aa20.5■□□□□ 0.87
TOM1-214ENST00000487670 SLC45A1Q9Y2W3 748 aa20.5■□□□□ 0.87
TOM1-214ENST00000487670 UTYO14607 1347 aa20.5■□□□□ 0.87
TOM1-214ENST00000487670 RPTORQ8N122 1335 aa20.5■□□□□ 0.87
TOM1-214ENST00000487670 RLFQ13129 1914 aa20.49■□□□□ 0.87
TOM1-214ENST00000487670 MYO5AQ9Y4I1 1855 aaKnown RBP20.49■□□□□ 0.87
TOM1-214ENST00000487670 PUM3Q15397 648 aaKnown RBP20.48■□□□□ 0.87
TOM1-214ENST00000487670 FAM110CQ1W6H9 321 aa20.48■□□□□ 0.87
TOM1-214ENST00000487670 LRRC26Q2I0M4 334 aa20.48■□□□□ 0.87
TOM1-214ENST00000487670 OGDHLQ9ULD0 1010 aa20.48■□□□□ 0.87
TOM1-214ENST00000487670 KIF16BQ96L93 1317 aa20.48■□□□□ 0.87
TOM1-214ENST00000487670 WDR66Q8TBY9 1149 aa20.47■□□□□ 0.87
TOM1-214ENST00000487670 HMX1Q9NP08 348 aaPredicted RBP20.47■□□□□ 0.87
TOM1-214ENST00000487670 IFIT1P09914 478 aaKnown RBP20.46■□□□□ 0.87
TOM1-214ENST00000487670 MAP3K10Q02779 954 aa20.46■□□□□ 0.87
TOM1-214ENST00000487670 TTC28Q96AY4 2481 aa20.46■□□□□ 0.87
TOM1-214ENST00000487670 FOCADQ5VW36 1801 aa20.46■□□□□ 0.87
TOM1-214ENST00000487670 POTEB2H3BUK9 544 aa20.45■□□□□ 0.86
TOM1-214ENST00000487670 ZEB1P37275 1124 aaPredicted RBP20.45■□□□□ 0.86
TOM1-214ENST00000487670 RFX5P48382 616 aaPredicted RBP20.45■□□□□ 0.86
TOM1-214ENST00000487670 RRP1BQ14684 758 aaKnown RBP20.45■□□□□ 0.86
TOM1-214ENST00000487670 LDHBP07195 334 aaKnown RBP20.44■□□□□ 0.86
TOM1-214ENST00000487670 COL6A1P12109 1028 aa20.44■□□□□ 0.86
TOM1-214ENST00000487670 CYP2B6P20813 491 aa20.44■□□□□ 0.86
TOM1-214ENST00000487670 PICALMQ13492 652 aa20.44■□□□□ 0.86
TOM1-214ENST00000487670 MAP3K21Q5TCX8 1036 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms