RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 TCP10Q12799 353 aa15.98■□□□□ 0.15
COL4A6-207ENST00000487645 SUPT20HL1Q3ZLR7 823 aa15.98■□□□□ 0.15
COL4A6-207ENST00000487645 GIMAP6Q6P9H5 292 aa15.98■□□□□ 0.15
COL4A6-207ENST00000487645 CWC27Q6UX04 472 aaKnown RBP15.98■□□□□ 0.15
COL4A6-207ENST00000487645 DDX4Q9NQI0 724 aaKnown RBP15.98■□□□□ 0.15
COL4A6-207ENST00000487645 MKRN1Q9UHC7 482 aaKnown RBP15.98■□□□□ 0.15
COL4A6-207ENST00000487645 SCAF8Q9UPN6 1271 aaKnown RBP15.98■□□□□ 0.15
COL4A6-207ENST00000487645 SLC4A4Q9Y6R1 1079 aa15.98■□□□□ 0.15
COL4A6-207ENST00000487645 RPAP1Q9BWH6 1393 aaPredicted RBP15.98■□□□□ 0.15
COL4A6-207ENST00000487645 COL2A1P02458 1487 aaPredicted RBP15.97■□□□□ 0.15
COL4A6-207ENST00000487645 PATL2C9JE40 543 aaKnown RBP15.97■□□□□ 0.15
COL4A6-207ENST00000487645 PICALMQ13492 652 aa15.97■□□□□ 0.15
COL4A6-207ENST00000487645 ZFPM1Q8IX07 1006 aa15.97■□□□□ 0.15
COL4A6-207ENST00000487645 HOOK2Q96ED9 719 aa15.97■□□□□ 0.15
COL4A6-207ENST00000487645 CDCA5Q96FF9 252 aa15.97■□□□□ 0.15
COL4A6-207ENST00000487645 TEPSINQ96N21 525 aa15.97■□□□□ 0.15
COL4A6-207ENST00000487645 TMEM39BQ9GZU3 492 aa15.97■□□□□ 0.15
COL4A6-207ENST00000487645 OSBPL5Q9H0X9 879 aaPredicted RBP15.97■□□□□ 0.15
COL4A6-207ENST00000487645 DHX36Q9H2U1 1008 aaKnown RBP15.97■□□□□ 0.15
COL4A6-207ENST00000487645 FLT1P17948 1338 aa15.96■□□□□ 0.15
COL4A6-207ENST00000487645 PASKQ96RG2 1323 aa15.96■□□□□ 0.15
COL4A6-207ENST00000487645 GSG1L2A8MUP6 293 aa15.96■□□□□ 0.15
COL4A6-207ENST00000487645 MAPKAPK5Q8IW41 473 aa15.96■□□□□ 0.15
COL4A6-207ENST00000487645 DDRGK1Q96HY6 314 aa15.96■□□□□ 0.15
COL4A6-207ENST00000487645 NAV1Q8NEY1 1877 aa15.96■□□□□ 0.15
COL4A6-207ENST00000487645 ATRNL1Q5VV63 1379 aa15.96■□□□□ 0.15
COL4A6-207ENST00000487645 RAD50Q92878 1312 aa15.95■□□□□ 0.14
COL4A6-207ENST00000487645 TRAF5O00463 557 aa15.95■□□□□ 0.14
COL4A6-207ENST00000487645 PRKAB2O43741 272 aa15.95■□□□□ 0.14
COL4A6-207ENST00000487645 CDC45O75419 566 aa15.95■□□□□ 0.14
COL4A6-207ENST00000487645 NF2P35240 595 aa15.95■□□□□ 0.14
COL4A6-207ENST00000487645 NBPF12Q5TAG4 269 aaPredicted RBP15.95■□□□□ 0.14
COL4A6-207ENST00000487645 PRAMEF18Q5VWM3 479 aa15.95■□□□□ 0.14
COL4A6-207ENST00000487645 CASC1Q6TDU7 716 aa15.95■□□□□ 0.14
COL4A6-207ENST00000487645 ZSCAN29Q8IWY8 852 aaPredicted RBP15.95■□□□□ 0.14
COL4A6-207ENST00000487645 SDR42E1Q8WUS8 393 aa15.95■□□□□ 0.14
COL4A6-207ENST00000487645 DCP1AQ9NPI6 582 aaPredicted RBP15.95■□□□□ 0.14
COL4A6-207ENST00000487645 CCDC171Q6TFL3 1326 aa15.94■□□□□ 0.14
COL4A6-207ENST00000487645 DDTLA6NHG4 134 aaPredicted RBP15.94■□□□□ 0.14
COL4A6-207ENST00000487645 MAP3K10Q02779 954 aa15.94■□□□□ 0.14
COL4A6-207ENST00000487645 ALX1Q15699 326 aa15.94■□□□□ 0.14
COL4A6-207ENST00000487645 DLK2Q6UY11 383 aa15.94■□□□□ 0.14
COL4A6-207ENST00000487645 CCDC129Q6ZRS4 1044 aa15.94■□□□□ 0.14
COL4A6-207ENST00000487645 SH3BP5LQ7L8J4 393 aa15.94■□□□□ 0.14
COL4A6-207ENST00000487645 TTC6Q86TZ1 520 aa15.94■□□□□ 0.14
COL4A6-207ENST00000487645 FOXP4Q8IVH2 680 aaPredicted RBP15.94■□□□□ 0.14
COL4A6-207ENST00000487645 NACAP1Q9BZK3 213 aa15.94■□□□□ 0.14
COL4A6-207ENST00000487645 PI4KBQ9UBF8 816 aa15.94■□□□□ 0.14
COL4A6-207ENST00000487645 SGSM2O43147 1006 aa15.93■□□□□ 0.14
COL4A6-207ENST00000487645 APPP05067 770 aa15.93■□□□□ 0.14
COL4A6-207ENST00000487645 HSPD1P10809 573 aaKnown RBP15.93■□□□□ 0.14
COL4A6-207ENST00000487645 SBK1Q52WX2 424 aa15.93■□□□□ 0.14
COL4A6-207ENST00000487645 CST9Q5W186 159 aa15.93■□□□□ 0.14
COL4A6-207ENST00000487645 ZNF589Q86UQ0 364 aaPredicted RBP15.93■□□□□ 0.14
COL4A6-207ENST00000487645 IFNL3Q8IZI9 196 aa15.93■□□□□ 0.14
COL4A6-207ENST00000487645 CSRNP1Q96S65 589 aa15.93■□□□□ 0.14
COL4A6-207ENST00000487645 MCM9Q9NXL9 1143 aa15.93■□□□□ 0.14
COL4A6-207ENST00000487645 TAOK2Q9UL54 1235 aa15.93■□□□□ 0.14
COL4A6-207ENST00000487645 PALD1Q9ULE6 856 aa15.93■□□□□ 0.14
COL4A6-207ENST00000487645 DDX60LQ5H9U9 1706 aaKnown RBP15.93■□□□□ 0.14
COL4A6-207ENST00000487645 PPP1R12BO60237 982 aaPredicted RBP15.92■□□□□ 0.14
COL4A6-207ENST00000487645 TBC1D12O60347 775 aa15.92■□□□□ 0.14
COL4A6-207ENST00000487645 CELF2O95319 508 aaKnown RBP15.92■□□□□ 0.14
COL4A6-207ENST00000487645 POLR3DP05423 398 aaPredicted RBP15.92■□□□□ 0.14
COL4A6-207ENST00000487645 HLA-DOAP06340 250 aa15.92■□□□□ 0.14
COL4A6-207ENST00000487645 FKBP1BP68106 108 aa15.92■□□□□ 0.14
COL4A6-207ENST00000487645 FMR1Q06787 632 aaKnown RBP eCLIP15.92■□□□□ 0.14
COL4A6-207ENST00000487645 DCAF15Q66K64 600 aa15.92■□□□□ 0.14
COL4A6-207ENST00000487645 METTL16Q86W50 562 aaKnown RBP15.92■□□□□ 0.14
COL4A6-207ENST00000487645 AMOTL1Q8IY63 956 aa15.92■□□□□ 0.14
COL4A6-207ENST00000487645 ESYT1Q9BSJ8 1104 aa15.92■□□□□ 0.14
COL4A6-207ENST00000487645 SAP30BPQ9UHR5 308 aaKnown RBP15.92■□□□□ 0.14
COL4A6-207ENST00000487645 USP17L12C9JPN9 530 aa15.91■□□□□ 0.14
COL4A6-207ENST00000487645 USP17L21D6R901 530 aa15.91■□□□□ 0.14
COL4A6-207ENST00000487645 FOXP2O15409 715 aa15.91■□□□□ 0.14
COL4A6-207ENST00000487645 CTR9Q6PD62 1173 aa15.91■□□□□ 0.14
COL4A6-207ENST00000487645 CDAN1Q8IWY9 1227 aa15.91■□□□□ 0.14
COL4A6-207ENST00000487645 C2orf69Q8N8R5 385 aa15.91■□□□□ 0.14
COL4A6-207ENST00000487645 DSCC1Q9BVC3 393 aa15.91■□□□□ 0.14
COL4A6-207ENST00000487645 HERC5Q9UII4 1024 aaKnown RBP15.91■□□□□ 0.14
COL4A6-207ENST00000487645 SIPA1L1O43166 1804 aa15.91■□□□□ 0.14
COL4A6-207ENST00000487645 MYH8P13535 1937 aa15.9■□□□□ 0.14
COL4A6-207ENST00000487645 UNCXA6NJT0 531 aa15.9■□□□□ 0.14
COL4A6-207ENST00000487645 USP2O75604 605 aaPredicted RBP15.9■□□□□ 0.14
COL4A6-207ENST00000487645 TDO2P48775 406 aa15.9■□□□□ 0.14
COL4A6-207ENST00000487645 C1QTNF8P60827 252 aa15.9■□□□□ 0.14
COL4A6-207ENST00000487645 MAP3K11Q16584 847 aa15.9■□□□□ 0.14
COL4A6-207ENST00000487645 C12orf60Q5U649 245 aa15.9■□□□□ 0.14
COL4A6-207ENST00000487645 VPS53Q5VIR6 699 aa15.9■□□□□ 0.14
COL4A6-207ENST00000487645 ARMC9Q7Z3E5 817 aa15.9■□□□□ 0.14
COL4A6-207ENST00000487645 NAPBQ9H115 298 aa15.9■□□□□ 0.14
COL4A6-207ENST00000487645 EHD4Q9H223 541 aa15.9■□□□□ 0.14
COL4A6-207ENST00000487645 IL25Q9H293 177 aa15.9■□□□□ 0.14
COL4A6-207ENST00000487645 ZNF408Q9H9D4 720 aa15.9■□□□□ 0.14
COL4A6-207ENST00000487645 GBA2Q9HCG7 927 aaPredicted RBP15.9■□□□□ 0.14
COL4A6-207ENST00000487645 EPB41L4AQ9HCS5 686 aaPredicted RBP15.9■□□□□ 0.14
COL4A6-207ENST00000487645 ARPP21Q9UBL0 812 aaPredicted RBP15.9■□□□□ 0.14
COL4A6-207ENST00000487645 ZMYM6O95789 1325 aa15.9■□□□□ 0.14
COL4A6-207ENST00000487645 PAPPA2Q9BXP8 1791 aa15.9■□□□□ 0.14
COL4A6-207ENST00000487645 SSC5DA1L4H1 1573 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms