RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 PAXIP1Q6ZW49 1069 aaPredicted RBP23.61■■□□□ 1.37
SEC22A-208ENST00000487572 SAPCD2Q86UD0 394 aa23.61■■□□□ 1.37
SEC22A-208ENST00000487572 SKAP1Q86WV1 359 aa23.61■■□□□ 1.37
SEC22A-208ENST00000487572 LCORLQ8N3X6 602 aa23.61■■□□□ 1.37
SEC22A-208ENST00000487572 MKRN1Q9UHC7 482 aaKnown RBP23.61■■□□□ 1.37
SEC22A-208ENST00000487572 RPAP1Q9BWH6 1393 aaPredicted RBP23.61■■□□□ 1.37
SEC22A-208ENST00000487572 ZFYP08048 801 aaPredicted RBP23.6■■□□□ 1.37
SEC22A-208ENST00000487572 USP5P45974 858 aa23.6■■□□□ 1.37
SEC22A-208ENST00000487572 PUS7LQ9H0K6 701 aaKnown RBP23.6■■□□□ 1.37
SEC22A-208ENST00000487572 ANGEL1Q9UNK9 670 aaKnown RBP23.6■■□□□ 1.37
SEC22A-208ENST00000487572 PAPPA2Q9BXP8 1791 aa23.6■■□□□ 1.37
SEC22A-208ENST00000487572 FLT1P17948 1338 aa23.59■■□□□ 1.37
SEC22A-208ENST00000487572 UBE2Q2LH0YL09 131 aa23.59■■□□□ 1.37
SEC22A-208ENST00000487572 PPP1R12BO60237 982 aaPredicted RBP23.59■■□□□ 1.37
SEC22A-208ENST00000487572 FKBP1BP68106 108 aa23.59■■□□□ 1.37
SEC22A-208ENST00000487572 SH3BP5LQ7L8J4 393 aa23.59■■□□□ 1.37
SEC22A-208ENST00000487572 ARMC9Q7Z3E5 817 aa23.59■■□□□ 1.37
SEC22A-208ENST00000487572 APPBP2Q92624 585 aa23.59■■□□□ 1.37
SEC22A-208ENST00000487572 AIDAQ96BJ3 306 aa23.59■■□□□ 1.37
SEC22A-208ENST00000487572 CSRNP1Q96S65 589 aa23.59■■□□□ 1.37
SEC22A-208ENST00000487572 CRNKL1Q9BZJ0 848 aaKnown RBP23.59■■□□□ 1.37
SEC22A-208ENST00000487572 OSBPL5Q9H0X9 879 aaPredicted RBP23.59■■□□□ 1.37
SEC22A-208ENST00000487572 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.59■■□□□ 1.37
SEC22A-208ENST00000487572 DDTLA6NHG4 134 aaPredicted RBP23.58■■□□□ 1.37
SEC22A-208ENST00000487572 NPM3O75607 178 aaKnown RBP23.58■■□□□ 1.37
SEC22A-208ENST00000487572 GRM1Q13255 1194 aa23.58■■□□□ 1.37
SEC22A-208ENST00000487572 TTC22Q5TAA0 569 aa23.58■■□□□ 1.37
SEC22A-208ENST00000487572 MIGA2Q7L4E1 593 aa23.58■■□□□ 1.37
SEC22A-208ENST00000487572 HOOK2Q96ED9 719 aa23.58■■□□□ 1.37
SEC22A-208ENST00000487572 SAP30BPQ9UHR5 308 aaKnown RBP23.58■■□□□ 1.37
SEC22A-208ENST00000487572 DEFB115Q30KQ5 88 aa23.57■■□□□ 1.36
SEC22A-208ENST00000487572 OSBP2Q969R2 916 aa23.57■■□□□ 1.36
SEC22A-208ENST00000487572 RASSF10A6NK89 507 aa23.56■■□□□ 1.36
SEC22A-208ENST00000487572 M0R2C6 588 aa23.56■■□□□ 1.36
SEC22A-208ENST00000487572 USP2O75604 605 aaPredicted RBP23.56■■□□□ 1.36
SEC22A-208ENST00000487572 SLC4A8Q2Y0W8 1093 aa23.56■■□□□ 1.36
SEC22A-208ENST00000487572 SDR42E1Q8WUS8 393 aa23.56■■□□□ 1.36
SEC22A-208ENST00000487572 PRKAB2O43741 272 aa23.55■■□□□ 1.36
SEC22A-208ENST00000487572 GSPT1P15170 499 aaKnown RBP23.55■■□□□ 1.36
SEC22A-208ENST00000487572 IREB2P48200 963 aaKnown RBP23.55■■□□□ 1.36
SEC22A-208ENST00000487572 DCAF15Q66K64 600 aa23.55■■□□□ 1.36
SEC22A-208ENST00000487572 SEC62Q99442 399 aaKnown RBP23.55■■□□□ 1.36
SEC22A-208ENST00000487572 CDK5RAP2Q96SN8 1893 aa23.55■■□□□ 1.36
SEC22A-208ENST00000487572 AK9Q5TCS8 1911 aa23.55■■□□□ 1.36
SEC22A-208ENST00000487572 ATRNL1Q5VV63 1379 aa23.54■■□□□ 1.36
SEC22A-208ENST00000487572 ZMYM1Q5SVZ6 1142 aa23.54■■□□□ 1.36
SEC22A-208ENST00000487572 CYP4F22Q6NT55 531 aa23.54■■□□□ 1.36
SEC22A-208ENST00000487572 PALD1Q9ULE6 856 aa23.54■■□□□ 1.36
SEC22A-208ENST00000487572 SLC4A4Q9Y6R1 1079 aa23.54■■□□□ 1.36
SEC22A-208ENST00000487572 SLURP2P0DP57 97 aa23.53■■□□□ 1.36
SEC22A-208ENST00000487572 RGMBQ6NW40 437 aa23.53■■□□□ 1.36
SEC22A-208ENST00000487572 ZNF341Q9BYN7 854 aa23.53■■□□□ 1.36
SEC22A-208ENST00000487572 FOCADQ5VW36 1801 aa23.53■■□□□ 1.36
SEC22A-208ENST00000487572 COL2A1P02458 1487 aaPredicted RBP23.53■■□□□ 1.36
SEC22A-208ENST00000487572 GPAA1O43292 621 aa23.52■■□□□ 1.36
SEC22A-208ENST00000487572 ZNF157P51786 506 aaPredicted RBP23.52■■□□□ 1.36
SEC22A-208ENST00000487572 MAP3K11Q16584 847 aa23.52■■□□□ 1.36
SEC22A-208ENST00000487572 CAPNS2Q96L46 248 aa23.52■■□□□ 1.36
SEC22A-208ENST00000487572 STRBPQ96SI9 672 aaKnown RBP23.52■■□□□ 1.36
SEC22A-208ENST00000487572 DHX36Q9H2U1 1008 aaKnown RBP23.52■■□□□ 1.36
SEC22A-208ENST00000487572 FAM196BA6NMK8 535 aa23.51■■□□□ 1.35
SEC22A-208ENST00000487572 SDSP20132 328 aa23.51■■□□□ 1.35
SEC22A-208ENST00000487572 VEGFBP49765 207 aa23.51■■□□□ 1.35
SEC22A-208ENST00000487572 NMIQ13287 307 aaPredicted RBP23.51■■□□□ 1.35
SEC22A-208ENST00000487572 LDLRAD1Q5T700 205 aa23.51■■□□□ 1.35
SEC22A-208ENST00000487572 DNAJC5GQ8N7S2 189 aa23.51■■□□□ 1.35
SEC22A-208ENST00000487572 KLRG1Q96E93 195 aa23.51■■□□□ 1.35
SEC22A-208ENST00000487572 HHIPL1Q96JK4 782 aa23.51■■□□□ 1.35
SEC22A-208ENST00000487572 CLMNQ96JQ2 1002 aa23.51■■□□□ 1.35
SEC22A-208ENST00000487572 FAM227BQ96M60 508 aa23.51■■□□□ 1.35
SEC22A-208ENST00000487572 WRNIP1Q96S55 665 aa23.51■■□□□ 1.35
SEC22A-208ENST00000487572 DCP1AQ9NPI6 582 aaPredicted RBP23.51■■□□□ 1.35
SEC22A-208ENST00000487572 MCM9Q9NXL9 1143 aa23.51■■□□□ 1.35
SEC22A-208ENST00000487572 HLA-DOAP06340 250 aa23.5■■□□□ 1.35
SEC22A-208ENST00000487572 CCDC129Q6ZRS4 1044 aa23.5■■□□□ 1.35
SEC22A-208ENST00000487572 PI4KBQ9UBF8 816 aa23.5■■□□□ 1.35
SEC22A-208ENST00000487572 NAV1Q8NEY1 1877 aa23.49■■□□□ 1.35
SEC22A-208ENST00000487572 A0A0D9SFI3 127 aa23.49■■□□□ 1.35
SEC22A-208ENST00000487572 POLR3DP05423 398 aaPredicted RBP23.49■■□□□ 1.35
SEC22A-208ENST00000487572 ECE1P42892 770 aa23.49■■□□□ 1.35
SEC22A-208ENST00000487572 MAP3K9P80192 1104 aa23.49■■□□□ 1.35
SEC22A-208ENST00000487572 ANKRD13AQ8IZ07 590 aa23.49■■□□□ 1.35
SEC22A-208ENST00000487572 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.49■■□□□ 1.35
SEC22A-208ENST00000487572 DDRGK1Q96HY6 314 aa23.49■■□□□ 1.35
SEC22A-208ENST00000487572 TRIM34Q9BYJ4 488 aa23.49■■□□□ 1.35
SEC22A-208ENST00000487572 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.49■■□□□ 1.35
SEC22A-208ENST00000487572 HELLSQ9NRZ9 838 aa23.49■■□□□ 1.35
SEC22A-208ENST00000487572 DIAPH3Q9NSV4 1193 aa23.49■■□□□ 1.35
SEC22A-208ENST00000487572 ATP8A2Q9NTI2 1148 aa23.49■■□□□ 1.35
SEC22A-208ENST00000487572 WDR33Q9C0J8 1336 aaKnown RBP23.49■■□□□ 1.35
SEC22A-208ENST00000487572 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.48■■□□□ 1.35
SEC22A-208ENST00000487572 RASAL3Q86YV0 1011 aa23.48■■□□□ 1.35
SEC22A-208ENST00000487572 CRACR2BQ8N4Y2 399 aaPredicted RBP23.48■■□□□ 1.35
SEC22A-208ENST00000487572 ZKSCAN4Q969J2 545 aaPredicted RBP23.48■■□□□ 1.35
SEC22A-208ENST00000487572 SLC10A4Q96EP9 437 aa23.48■■□□□ 1.35
SEC22A-208ENST00000487572 ELP3Q9H9T3 547 aa23.48■■□□□ 1.35
SEC22A-208ENST00000487572 CSADQ9Y600 493 aa23.48■■□□□ 1.35
SEC22A-208ENST00000487572 OTOFQ9HC10 1997 aa23.47■■□□□ 1.35
SEC22A-208ENST00000487572 APPP05067 770 aa23.47■■□□□ 1.35
SEC22A-208ENST00000487572 CYP2D6P10635 497 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms