RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 WDR66Q8TBY9 1149 aa19.15■□□□□ 0.66
NME1-208ENST00000487481 COA7Q96BR5 231 aa19.15■□□□□ 0.66
NME1-208ENST00000487481 SRCIN1Q9C0H9 1055 aa19.15■□□□□ 0.66
NME1-208ENST00000487481 PICK1Q9NRD5 415 aa19.15■□□□□ 0.66
NME1-208ENST00000487481 MTMR10Q9NXD2 777 aa19.15■□□□□ 0.66
NME1-208ENST00000487481 ZMYND8Q9ULU4 1186 aaPredicted RBP19.15■□□□□ 0.66
NME1-208ENST00000487481 DAGLAQ9Y4D2 1042 aa19.15■□□□□ 0.66
NME1-208ENST00000487481 ZHX2Q9Y6X8 837 aa19.15■□□□□ 0.66
NME1-208ENST00000487481 ATRNL1Q5VV63 1379 aa19.15■□□□□ 0.66
NME1-208ENST00000487481 DOCK1Q14185 1865 aa19.14■□□□□ 0.65
NME1-208ENST00000487481 NCBP3Q53F19 620 aaKnown RBP19.14■□□□□ 0.65
NME1-208ENST00000487481 GADL1Q6ZQY3 521 aa19.14■□□□□ 0.65
NME1-208ENST00000487481 TDHQ8IZJ6 230 aa19.14■□□□□ 0.65
NME1-208ENST00000487481 FAM198AQ9UFP1 575 aa19.14■□□□□ 0.65
NME1-208ENST00000487481 TAOK2Q9UL54 1235 aa19.14■□□□□ 0.65
NME1-208ENST00000487481 PHIPQ8WWQ0 1821 aa19.14■□□□□ 0.65
NME1-208ENST00000487481 IFIT1P09914 478 aaKnown RBP19.13■□□□□ 0.65
NME1-208ENST00000487481 PTPRAP18433 802 aa19.13■□□□□ 0.65
NME1-208ENST00000487481 PUM3Q15397 648 aaKnown RBP19.13■□□□□ 0.65
NME1-208ENST00000487481 RABL6Q3YEC7 729 aaPredicted RBP19.13■□□□□ 0.65
NME1-208ENST00000487481 AFG3L2Q9Y4W6 797 aa19.13■□□□□ 0.65
NME1-208ENST00000487481 DDX60LQ5H9U9 1706 aaKnown RBP19.13■□□□□ 0.65
NME1-208ENST00000487481 UTYO14607 1347 aa19.12■□□□□ 0.65
NME1-208ENST00000487481 PHF20L1A8MW92 1017 aa19.12■□□□□ 0.65
NME1-208ENST00000487481 ZEB1P37275 1124 aaPredicted RBP19.12■□□□□ 0.65
NME1-208ENST00000487481 SLC4A10Q6U841 1118 aa19.12■□□□□ 0.65
NME1-208ENST00000487481 COL25A1Q9BXS0 654 aaPredicted RBP19.12■□□□□ 0.65
NME1-208ENST00000487481 NBPF3Q9H094 633 aa19.12■□□□□ 0.65
NME1-208ENST00000487481 BICC1Q9H694 974 aaKnown RBP19.12■□□□□ 0.65
NME1-208ENST00000487481 HMGCRP04035 888 aa19.11■□□□□ 0.65
NME1-208ENST00000487481 NBPF7P0C2Y1 421 aaPredicted RBP19.11■□□□□ 0.65
NME1-208ENST00000487481 FGFR2P21802 821 aa19.11■□□□□ 0.65
NME1-208ENST00000487481 MAGEA10P43363 369 aaPredicted RBP19.11■□□□□ 0.65
NME1-208ENST00000487481 EXOSC9Q06265 439 aaKnown RBP19.11■□□□□ 0.65
NME1-208ENST00000487481 DIXDC1Q155Q3 683 aa19.11■□□□□ 0.65
NME1-208ENST00000487481 FAM110CQ1W6H9 321 aa19.11■□□□□ 0.65
NME1-208ENST00000487481 ANKRD13CQ8N6S4 541 aa19.1■□□□□ 0.65
NME1-208ENST00000487481 PNMA3Q9UL41 463 aa19.1■□□□□ 0.65
NME1-208ENST00000487481 AGTPBP1Q9UPW5 1226 aa19.1■□□□□ 0.65
NME1-208ENST00000487481 VCANP13611 3396 aa19.1■□□□□ 0.65
NME1-208ENST00000487481 SYN1P17600 705 aa19.09■□□□□ 0.65
NME1-208ENST00000487481 PRDX5P30044 214 aa19.09■□□□□ 0.65
NME1-208ENST00000487481 ZFPM1Q8IX07 1006 aa19.09■□□□□ 0.65
NME1-208ENST00000487481 C11orf49Q9H6J7 331 aa19.09■□□□□ 0.65
NME1-208ENST00000487481 USP40Q9NVE5 1235 aa19.09■□□□□ 0.65
NME1-208ENST00000487481 RPTORQ8N122 1335 aa19.08■□□□□ 0.65
NME1-208ENST00000487481 SLC5A1P13866 664 aa19.08■□□□□ 0.64
NME1-208ENST00000487481 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.08■□□□□ 0.64
NME1-208ENST00000487481 ANKRD44Q8N8A2 993 aa19.08■□□□□ 0.64
NME1-208ENST00000487481 UBE2OQ9C0C9 1292 aaKnown RBP19.08■□□□□ 0.64
NME1-208ENST00000487481 HMX1Q9NP08 348 aaPredicted RBP19.08■□□□□ 0.64
NME1-208ENST00000487481 LRRFIP2Q9Y608 721 aaKnown RBP19.08■□□□□ 0.64
NME1-208ENST00000487481 MYH2Q9UKX2 1941 aa19.08■□□□□ 0.64
NME1-208ENST00000487481 RFX7Q2KHR2 1363 aa19.07■□□□□ 0.64
NME1-208ENST00000487481 LOC285556D6RIA3 1793 aa19.07■□□□□ 0.64
NME1-208ENST00000487481 TRIM75PA6NK02 468 aa19.07■□□□□ 0.64
NME1-208ENST00000487481 CTNND1O60716 968 aaKnown RBP19.07■□□□□ 0.64
NME1-208ENST00000487481 ENTPD3O75355 529 aa19.07■□□□□ 0.64
NME1-208ENST00000487481 LDHBP07195 334 aaKnown RBP19.07■□□□□ 0.64
NME1-208ENST00000487481 MAP3K10Q02779 954 aa19.07■□□□□ 0.64
NME1-208ENST00000487481 WDR63Q8IWG1 891 aa19.07■□□□□ 0.64
NME1-208ENST00000487481 LPIN2Q92539 896 aa19.07■□□□□ 0.64
NME1-208ENST00000487481 IDI2Q9BXS1 227 aa19.07■□□□□ 0.64
NME1-208ENST00000487481 LAMA2P24043 3122 aaKnown RBP19.07■□□□□ 0.64
NME1-208ENST00000487481 RGS3P49796 1198 aa19.06■□□□□ 0.64
NME1-208ENST00000487481 KLHDC4Q8TBB5 520 aa19.06■□□□□ 0.64
NME1-208ENST00000487481 SPINK5Q9NQ38 1064 aaPredicted RBP19.06■□□□□ 0.64
NME1-208ENST00000487481 OGDHLQ9ULD0 1010 aa19.06■□□□□ 0.64
NME1-208ENST00000487481 SALL1Q9NSC2 1324 aa19.05■□□□□ 0.64
NME1-208ENST00000487481 GCLCP48506 637 aaPredicted RBP19.05■□□□□ 0.64
NME1-208ENST00000487481 ZSCAN29Q8IWY8 852 aaPredicted RBP19.05■□□□□ 0.64
NME1-208ENST00000487481 PROCA1Q8NCQ7 364 aaPredicted RBP19.05■□□□□ 0.64
NME1-208ENST00000487481 TREML2Q5T2D2 321 aa19.04■□□□□ 0.64
NME1-208ENST00000487481 SH3BP5LQ7L8J4 393 aa19.04■□□□□ 0.64
NME1-208ENST00000487481 GJD2Q9UKL4 321 aa19.04■□□□□ 0.64
NME1-208ENST00000487481 PLXNB2O15031 1838 aa19.04■□□□□ 0.64
NME1-208ENST00000487481 PFASO15067 1338 aa19.03■□□□□ 0.64
NME1-208ENST00000487481 TRIM32Q13049 653 aa19.03■□□□□ 0.64
NME1-208ENST00000487481 FAM109BQ6ICB4 259 aaPredicted RBP19.03■□□□□ 0.64
NME1-208ENST00000487481 GNL3LQ9NVN8 582 aaKnown RBP19.03■□□□□ 0.64
NME1-208ENST00000487481 COL2A1P02458 1487 aaPredicted RBP19.03■□□□□ 0.64
NME1-208ENST00000487481 GAKO14976 1311 aa19.02■□□□□ 0.64
NME1-208ENST00000487481 EYSQ5T1H1 3165 aa19.02■□□□□ 0.64
NME1-208ENST00000487481 EYA2O00167 538 aa19.02■□□□□ 0.64
NME1-208ENST00000487481 PABPC4Q13310 644 aaKnown RBP eCLIP19.02■□□□□ 0.641e-26■■■■□ 19.9
NME1-208ENST00000487481 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.02■□□□□ 0.64
NME1-208ENST00000487481 DDTLA6NHG4 134 aaPredicted RBP19.01■□□□□ 0.63
NME1-208ENST00000487481 SEMA3EO15041 775 aa19.01■□□□□ 0.63
NME1-208ENST00000487481 MAP3K21Q5TCX8 1036 aa19.01■□□□□ 0.63
NME1-208ENST00000487481 CCDC84Q86UT8 332 aaPredicted RBP19.01■□□□□ 0.63
NME1-208ENST00000487481 ZGPATQ8N5A5 531 aaKnown RBP19.01■□□□□ 0.63
NME1-208ENST00000487481 TRIB2Q92519 343 aa19.01■□□□□ 0.63
NME1-208ENST00000487481 DENND2AQ9ULE3 1009 aa19.01■□□□□ 0.63
NME1-208ENST00000487481 ATAD5Q96QE3 1844 aa19■□□□□ 0.63
NME1-208ENST00000487481 SPTBN5Q9NRC6 3674 aaKnown RBP19■□□□□ 0.63
NME1-208ENST00000487481 POTEB2H3BUK9 544 aa19■□□□□ 0.63
NME1-208ENST00000487481 GUCD1Q96NT3 240 aa19■□□□□ 0.63
NME1-208ENST00000487481 TBC1D2Q9BYX2 928 aa19■□□□□ 0.63
NME1-208ENST00000487481 TBC1D12O60347 775 aa18.99■□□□□ 0.63
NME1-208ENST00000487481 SLURP2P0DP57 97 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms