RNA–Protein interactions for RNA: ENST00000487222.5

EPHB4-206, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 5,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-206ENST00000487222 CARD6Q9BX69 1037 aa16.51■□□□□ 0.23
EPHB4-206ENST00000487222 TMEM63CQ9P1W3 806 aa16.51■□□□□ 0.23
EPHB4-206ENST00000487222 CNNM4Q6P4Q7 775 aa16.5■□□□□ 0.23
EPHB4-206ENST00000487222 XAGE2Q96GT9 111 aa16.5■□□□□ 0.23
EPHB4-206ENST00000487222 ORAI2Q96SN7 254 aa16.5■□□□□ 0.23
EPHB4-206ENST00000487222 SYNRGQ9UMZ2 1314 aa16.5■□□□□ 0.23
EPHB4-206ENST00000487222 MXRA7P84157 204 aa16.5■□□□□ 0.23
EPHB4-206ENST00000487222 ZBTB16Q05516 673 aa16.5■□□□□ 0.23
EPHB4-206ENST00000487222 PUM3Q15397 648 aaKnown RBP16.5■□□□□ 0.23
EPHB4-206ENST00000487222 CDC37L1Q7L3B6 337 aa16.5■□□□□ 0.23
EPHB4-206ENST00000487222 TTC6Q86TZ1 520 aa16.5■□□□□ 0.23
EPHB4-206ENST00000487222 CCDC26Q8TAB7 109 aa16.5■□□□□ 0.23
EPHB4-206ENST00000487222 MRPL12P52815 198 aaKnown RBP16.5■□□□□ 0.23
EPHB4-206ENST00000487222 PPP2R5BQ15173 497 aa16.5■□□□□ 0.23
EPHB4-206ENST00000487222 BTG4Q9NY30 223 aa16.5■□□□□ 0.23
EPHB4-206ENST00000487222 GJC1P36383 396 aa16.5■□□□□ 0.23
EPHB4-206ENST00000487222 TTC31Q49AM3 519 aaPredicted RBP16.5■□□□□ 0.23
EPHB4-206ENST00000487222 TMTC1Q8IUR5 882 aa16.5■□□□□ 0.23
EPHB4-206ENST00000487222 CCDC114Q96M63 670 aa16.5■□□□□ 0.23
EPHB4-206ENST00000487222 RAPGEF1Q13905 1077 aa16.49■□□□□ 0.23
EPHB4-206ENST00000487222 OTUD7BQ6GQQ9 843 aa16.49■□□□□ 0.23
EPHB4-206ENST00000487222 CCDC50Q8IVM0 306 aa16.49■□□□□ 0.23
EPHB4-206ENST00000487222 CDCA7Q9BWT1 371 aaPredicted RBP16.49■□□□□ 0.23
EPHB4-206ENST00000487222 KIAA0232Q92628 1395 aa16.49■□□□□ 0.23
EPHB4-206ENST00000487222 ITGA6P23229 1130 aa16.49■□□□□ 0.23
EPHB4-206ENST00000487222 SAMD15Q9P1V8 674 aa16.49■□□□□ 0.23
EPHB4-206ENST00000487222 NFE2L3Q9Y4A8 694 aa16.49■□□□□ 0.23
EPHB4-206ENST00000487222 V9GY48 417 aaPredicted RBP16.49■□□□□ 0.23
EPHB4-206ENST00000487222 PLEKHG3A1L390 1219 aa16.49■□□□□ 0.23
EPHB4-206ENST00000487222 SUCLG2Q96I99 432 aa16.49■□□□□ 0.23
EPHB4-206ENST00000487222 NUP58Q9BVL2 599 aa16.49■□□□□ 0.23
EPHB4-206ENST00000487222 LGR6Q9HBX8 967 aa16.49■□□□□ 0.23
EPHB4-206ENST00000487222 PAK1Q13153 545 aa16.49■□□□□ 0.23
EPHB4-206ENST00000487222 PARP10Q53GL7 1025 aa16.49■□□□□ 0.23
EPHB4-206ENST00000487222 C17orf53Q8N3J3 647 aaPredicted RBP16.49■□□□□ 0.23
EPHB4-206ENST00000487222 CSGALNACT2Q8N6G5 542 aa16.49■□□□□ 0.23
EPHB4-206ENST00000487222 SH3TC1Q8TE82 1336 aa16.49■□□□□ 0.23
EPHB4-206ENST00000487222 PIK3AP1Q6ZUJ8 805 aa16.48■□□□□ 0.23
EPHB4-206ENST00000487222 SMC6Q96SB8 1091 aa16.48■□□□□ 0.23
EPHB4-206ENST00000487222 DCAF17Q5H9S7 520 aaPredicted RBP16.48■□□□□ 0.23
EPHB4-206ENST00000487222 NAP1L3Q99457 506 aaPredicted RBP16.48■□□□□ 0.23
EPHB4-206ENST00000487222 PPP1R7Q15435 360 aa16.48■□□□□ 0.23
EPHB4-206ENST00000487222 ELF2Q15723 593 aa16.48■□□□□ 0.23
EPHB4-206ENST00000487222 TTC38Q5R3I4 469 aa16.48■□□□□ 0.23
EPHB4-206ENST00000487222 KRT40Q6A162 431 aa16.48■□□□□ 0.23
EPHB4-206ENST00000487222 C8orf74Q6P047 294 aa16.48■□□□□ 0.23
EPHB4-206ENST00000487222 AFAP1L1Q8TED9 768 aa16.48■□□□□ 0.23
EPHB4-206ENST00000487222 ARMT1Q9H993 441 aa16.48■□□□□ 0.23
EPHB4-206ENST00000487222 SSH2Q76I76 1423 aa16.48■□□□□ 0.23
EPHB4-206ENST00000487222 SMIM23A6NLE4 172 aa16.48■□□□□ 0.23
EPHB4-206ENST00000487222 GABPB1Q06547 395 aaPredicted RBP16.48■□□□□ 0.23
EPHB4-206ENST00000487222 JAKMIP2Q96AA8 810 aa16.48■□□□□ 0.23
EPHB4-206ENST00000487222 SLC52A2Q9HAB3 445 aa16.48■□□□□ 0.23
EPHB4-206ENST00000487222 ABCC4O15439 1325 aa16.48■□□□□ 0.23
EPHB4-206ENST00000487222 CEP57Q86XR8 500 aa16.47■□□□□ 0.23
EPHB4-206ENST00000487222 GCKRQ14397 625 aa16.47■□□□□ 0.23
EPHB4-206ENST00000487222 A6NNZ2 444 aa16.47■□□□□ 0.23
EPHB4-206ENST00000487222 EPB41P11171 864 aaKnown RBP16.47■□□□□ 0.23
EPHB4-206ENST00000487222 TUBB8Q3ZCM7 444 aa16.47■□□□□ 0.23
EPHB4-206ENST00000487222 CCDC25Q86WR0 208 aa16.47■□□□□ 0.23
EPHB4-206ENST00000487222 LRRC45Q96CN5 670 aa16.47■□□□□ 0.23
EPHB4-206ENST00000487222 RASSF4Q9H2L5 321 aa16.47■□□□□ 0.23
EPHB4-206ENST00000487222 SEL1L2Q5TEA6 688 aa16.47■□□□□ 0.23
EPHB4-206ENST00000487222 SPATA24Q86W54 205 aa16.47■□□□□ 0.23
EPHB4-206ENST00000487222 C10orf67Q8IYJ2 551 aa16.47■□□□□ 0.23
EPHB4-206ENST00000487222 UBLCP1Q8WVY7 318 aaPredicted RBP16.47■□□□□ 0.23
EPHB4-206ENST00000487222 JAK2O60674 1132 aa16.46■□□□□ 0.23
EPHB4-206ENST00000487222 FRMD4BQ9Y2L6 1034 aa16.46■□□□□ 0.23
EPHB4-206ENST00000487222 KRT9P35527 623 aa16.46■□□□□ 0.23
EPHB4-206ENST00000487222 ZBTB9Q96C00 473 aa16.46■□□□□ 0.23
EPHB4-206ENST00000487222 DSCC1Q9BVC3 393 aa16.46■□□□□ 0.23
EPHB4-206ENST00000487222 CEP83Q9Y592 693 aa16.46■□□□□ 0.23
EPHB4-206ENST00000487222 POSTNQ15063 836 aa16.46■□□□□ 0.23
EPHB4-206ENST00000487222 MSANTD4Q8NCY6 345 aa16.46■□□□□ 0.23
EPHB4-206ENST00000487222 ATP2A2P16615 1042 aaKnown RBP16.46■□□□□ 0.22
EPHB4-206ENST00000487222 B4GALNT4Q76KP1 1039 aa16.46■□□□□ 0.22
EPHB4-206ENST00000487222 SAMD9Q5K651 1589 aa16.46■□□□□ 0.22
EPHB4-206ENST00000487222 ABCA5Q8WWZ7 1642 aa16.45■□□□□ 0.22
EPHB4-206ENST00000487222 PDE8AO60658 829 aa16.45■□□□□ 0.22
EPHB4-206ENST00000487222 ATP5JP18859 108 aa16.45■□□□□ 0.22
EPHB4-206ENST00000487222 SETDB1Q15047 1291 aa16.45■□□□□ 0.22
EPHB4-206ENST00000487222 KCNK9Q9NPC2 374 aa16.45■□□□□ 0.22
EPHB4-206ENST00000487222 MAPK8IP1Q9UQF2 711 aa16.45■□□□□ 0.22
EPHB4-206ENST00000487222 GSPT1P15170 499 aaKnown RBP16.45■□□□□ 0.22
EPHB4-206ENST00000487222 SECISBP2LQ93073 1101 aaKnown RBP16.45■□□□□ 0.22
EPHB4-206ENST00000487222 CETN3O15182 167 aa16.45■□□□□ 0.22
EPHB4-206ENST00000487222 TEX11Q8IYF3 940 aa16.45■□□□□ 0.22
EPHB4-206ENST00000487222 NOX5Q96PH1 765 aa16.45■□□□□ 0.22
EPHB4-206ENST00000487222 PBRM1Q86U86 1689 aa16.44■□□□□ 0.22
EPHB4-206ENST00000487222 ME3Q16798 604 aa16.44■□□□□ 0.22
EPHB4-206ENST00000487222 HAUS3Q68CZ6 603 aa16.44■□□□□ 0.22
EPHB4-206ENST00000487222 KRBA2Q6ZNG9 492 aa16.44■□□□□ 0.22
EPHB4-206ENST00000487222 ZNF594Q96JF6 807 aaPredicted RBP16.44■□□□□ 0.22
EPHB4-206ENST00000487222 TMEM2Q9UHN6 1383 aa16.44■□□□□ 0.22
EPHB4-206ENST00000487222 EYA3Q99504 573 aa16.44■□□□□ 0.22
EPHB4-206ENST00000487222 TFCP2L1Q9NZI6 479 aa16.44■□□□□ 0.22
EPHB4-206ENST00000487222 ARHGEF10O15013 1369 aa16.44■□□□□ 0.22
EPHB4-206ENST00000487222 B4DLN1 442 aa16.44■□□□□ 0.22
EPHB4-206ENST00000487222 SSH3Q8TE77 659 aa16.44■□□□□ 0.22
EPHB4-206ENST00000487222 GLT8D2Q9H1C3 349 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms