RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 RALYLQ86SE5 291 aaKnown RBP10.17□□□□□ -0.78
NUDCD3-209ENST00000487118 DBNDD1Q9H9R9 158 aa10.17□□□□□ -0.78
NUDCD3-209ENST00000487118 DCP1AQ9NPI6 582 aaPredicted RBP10.17□□□□□ -0.78
NUDCD3-209ENST00000487118 FOXD4L1Q9NU39 408 aa10.17□□□□□ -0.78
NUDCD3-209ENST00000487118 TACC3Q9Y6A5 838 aa10.17□□□□□ -0.78
NUDCD3-209ENST00000487118 MYH2Q9UKX2 1941 aa10.17□□□□□ -0.78
NUDCD3-209ENST00000487118 LAMB1P07942 1786 aa10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 NEDD4P46934 1319 aa10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 G3V3G9 751 aa10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 PRC1O43663 620 aa10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 FGRP09769 529 aa10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 PCP11498 1178 aaKnown RBP10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 PLCG2P16885 1265 aa10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 MCM5P33992 734 aa10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 PPARAQ07869 468 aa10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 TRDNQ13061 729 aa10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 AOC3Q16853 763 aa10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 DACT2Q5SW24 774 aa10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 DCAF8Q5TAQ9 597 aa10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 CTR9Q6PD62 1173 aa10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 LARP6Q9BRS8 491 aaKnown RBP10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 NOL10Q9BSC4 688 aaKnown RBP10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 KRT23Q9C075 422 aa10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 RNF41Q9H4P4 317 aaPredicted RBP10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 CNNM2Q9H8M5 875 aa10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 PSME4Q14997 1843 aa10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 DDX60LQ5H9U9 1706 aaKnown RBP10.16□□□□□ -0.78
NUDCD3-209ENST00000487118 SCN9AQ15858 1988 aa10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 USP17L3A6NCW0 530 aa10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 USP17L4A6NCW7 530 aa10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 PPIP5K2O43314 1243 aa10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 BTDP43251 543 aa10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 RHBDL3P58872 404 aa10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 CTDSPL2Q05D32 466 aa10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 RAB3GAP1Q15042 981 aa10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 DALRD3Q5D0E6 543 aaKnown RBP10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 MFSD6Q6ZSS7 791 aa10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 CYB5R4Q7L1T6 521 aa10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 USP17L1Q7RTZ2 530 aa10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 NKX2-3Q8TAU0 364 aa10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 SH3RF3Q8TEJ3 882 aaPredicted RBP10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 BRF1Q92994 677 aa10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 TMEM87BQ96K49 555 aa10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 MTA3Q9BTC8 594 aa10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 MRIQ9BWK5 157 aa10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 ARPP21Q9UBL0 812 aaPredicted RBP10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 DAGLAQ9Y4D2 1042 aa10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.15□□□□□ -0.78
NUDCD3-209ENST00000487118 NAV1Q8NEY1 1877 aa10.15□□□□□ -0.79
NUDCD3-209ENST00000487118 ROBO3Q96MS0 1386 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 YDJCA8MPS7 323 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 B4E1Z4 1266 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 USP17L12C9JPN9 530 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 USP17L21D6R901 530 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 PFKFB2O60825 505 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 NT5C2P49902 561 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 NUCB2P80303 420 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 HDLBPQ00341 1268 aaKnown RBP10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 HHIPL2Q6UWX4 724 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 CCDC83Q8IWF9 413 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 GTF3C6Q969F1 213 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 FBXW7Q969H0 707 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 ZNF274Q96GC6 653 aaPredicted RBP10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 MXD3Q9BW11 206 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 LRRC2Q9BYS8 371 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 KCNQ5Q9NR82 932 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 TTF2Q9UNY4 1162 aaKnown RBP10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 COL4A5P29400 1685 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 FER1L6Q2WGJ9 1857 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 CDK5RAP2Q96SN8 1893 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 FOCADQ5VW36 1801 aa10.14□□□□□ -0.79
NUDCD3-209ENST00000487118 BAZ2AQ9UIF9 1905 aaKnown RBP10.13□□□□□ -0.79
NUDCD3-209ENST00000487118 CYP2D7A0A087X1C5 515 aa10.13□□□□□ -0.79
NUDCD3-209ENST00000487118 MINDY4BA8MYZ0 360 aa10.13□□□□□ -0.79
NUDCD3-209ENST00000487118 SH2B2O14492 632 aaPredicted RBP10.13□□□□□ -0.79
NUDCD3-209ENST00000487118 ORC4O43929 436 aa10.13□□□□□ -0.79
NUDCD3-209ENST00000487118 USP5P45974 858 aa10.13□□□□□ -0.79
NUDCD3-209ENST00000487118 FGD1P98174 961 aa10.13□□□□□ -0.79
NUDCD3-209ENST00000487118 APOBRQ0VD83 1088 aa10.13□□□□□ -0.79
NUDCD3-209ENST00000487118 C12orf60Q5U649 245 aa10.13□□□□□ -0.79
NUDCD3-209ENST00000487118 CHST3Q7LGC8 479 aa10.13□□□□□ -0.79
NUDCD3-209ENST00000487118 TEX11Q8IYF3 940 aa10.13□□□□□ -0.79
NUDCD3-209ENST00000487118 NECAB1Q8N987 351 aa10.13□□□□□ -0.79
NUDCD3-209ENST00000487118 INCENPQ9NQS7 918 aa10.13□□□□□ -0.79
NUDCD3-209ENST00000487118 MYO3BQ8WXR4 1341 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 LTBP3Q9NS15 1303 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 ADAMTSL1Q8N6G6 1762 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 SMIM22K7EJ46 135 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 KDM4AO75164 1064 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 CYP2D6P10635 497 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 PDIA3P30101 505 aaKnown RBP10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 IARSP41252 1262 aaKnown RBP10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 LIFRP42702 1097 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 CLEC17AQ6ZS10 378 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 SGMS1Q86VZ5 419 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 IGDCC4Q8TDY8 1250 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 TGFBRAP1Q8WUH2 860 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 ESR2Q92731 530 aa10.12□□□□□ -0.79
NUDCD3-209ENST00000487118 TEKT1Q969V4 418 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms