RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.01□□□□□ -0.17
COL3A1-206ENST00000487010 KCPQ6ZWJ8 1503 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 B4E1Z4 1266 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 FOXN1O15353 648 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 SEC31AO94979 1220 aaKnown RBP14□□□□□ -0.17
COL3A1-206ENST00000487010 MCAMP43121 646 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 GNG11P61952 73 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 TCIRG1Q13488 830 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 TAF7LQ5H9L4 462 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 MICU3Q86XE3 530 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 KRI1Q8N9T8 703 aaKnown RBP14□□□□□ -0.17
COL3A1-206ENST00000487010 TC2NQ8N9U0 490 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 WDR24Q96S15 920 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 UBXN6Q9BZV1 441 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 FAM217BQ9NTX9 383 aaPredicted RBP14□□□□□ -0.17
COL3A1-206ENST00000487010 HOOK1Q9UJC3 728 aaKnown RBP14□□□□□ -0.17
COL3A1-206ENST00000487010 MAN1B1Q9UKM7 699 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 TAOK2Q9UL54 1235 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 ATRNO75882 1429 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 MAP3K15Q6ZN16 1313 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 UBN2Q6ZU65 1347 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 ZNF18P17022 549 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 SLC9C2Q5TAH2 1124 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 SPECC1LQ69YQ0 1117 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 GPR161Q8N6U8 529 aaKnown RBP14□□□□□ -0.17
COL3A1-206ENST00000487010 PDILTQ8N807 584 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 CCDC85AQ96PX6 553 aaPredicted RBP14□□□□□ -0.17
COL3A1-206ENST00000487010 PLA2G12BQ9BX93 195 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 MRFAP1Q9Y605 127 aa14□□□□□ -0.17
COL3A1-206ENST00000487010 GOLGA8AA7E2F4 631 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 APPP05067 770 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 CSF1RP07333 972 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 IFIT5Q13325 482 aaKnown RBP13.99□□□□□ -0.17
COL3A1-206ENST00000487010 TEX35Q5T0J7 233 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 CC2D1AQ6P1N0 951 aaPredicted RBP13.99□□□□□ -0.17
COL3A1-206ENST00000487010 NFXL1Q6ZNB6 911 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 RSRC2Q7L4I2 434 aaKnown RBP13.99□□□□□ -0.17
COL3A1-206ENST00000487010 SGMS1Q86VZ5 419 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 STK11IPQ8N1F8 1099 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 KIFC2Q96AC6 838 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 LY9Q9HBG7 655 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 STK36Q9NRP7 1315 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 RIC1Q4ADV7 1423 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 ERVV-2B6SEH9 535 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 TBC1D8O95759 1140 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 PCCAP05165 728 aaPredicted RBP13.99□□□□□ -0.17
COL3A1-206ENST00000487010 CDK11BP21127 795 aaKnown RBP13.99□□□□□ -0.17
COL3A1-206ENST00000487010 SARSP49591 514 aaKnown RBP13.99□□□□□ -0.17
COL3A1-206ENST00000487010 ADKP55263 362 aaKnown RBP13.99□□□□□ -0.17
COL3A1-206ENST00000487010 PPP2R3AQ06190 1150 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 FMR1Q06787 632 aaKnown RBP eCLIP13.99□□□□□ -0.17
COL3A1-206ENST00000487010 SSRP1Q08945 709 aaKnown RBP13.99□□□□□ -0.17
COL3A1-206ENST00000487010 TRIM28Q13263 835 aaKnown RBP13.99□□□□□ -0.17
COL3A1-206ENST00000487010 POSTNQ15063 836 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 UBE3CQ15386 1083 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 HSP90AA4PQ58FG1 418 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 SPECC1Q5M775 1068 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 NT5DC1Q5TFE4 455 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 TOGARAM2Q6ZUX3 1019 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 MLKLQ8NB16 471 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 ENOX1Q8TC92 643 aaKnown RBP13.99□□□□□ -0.17
COL3A1-206ENST00000487010 ZNF512BQ96KM6 892 aaPredicted RBP13.99□□□□□ -0.17
COL3A1-206ENST00000487010 EPC1Q9H2F5 836 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 NFE2L3Q9Y4A8 694 aa13.99□□□□□ -0.17
COL3A1-206ENST00000487010 POLR3GO15318 223 aaPredicted RBP13.98□□□□□ -0.17
COL3A1-206ENST00000487010 SASH3O75995 380 aa13.98□□□□□ -0.17
COL3A1-206ENST00000487010 TTF1Q15361 905 aaPredicted RBP13.98□□□□□ -0.17
COL3A1-206ENST00000487010 TMEM67Q5HYA8 995 aa13.98□□□□□ -0.17
COL3A1-206ENST00000487010 METTL24Q5JXM2 366 aa13.98□□□□□ -0.17
COL3A1-206ENST00000487010 NOSTRINQ8IVI9 506 aa13.98□□□□□ -0.17
COL3A1-206ENST00000487010 FAM89AQ96GI7 184 aa13.98□□□□□ -0.17
COL3A1-206ENST00000487010 SLC26A6Q9BXS9 759 aa13.98□□□□□ -0.17
COL3A1-206ENST00000487010 PIH1D3Q9NQM4 214 aaKnown RBP13.98□□□□□ -0.17
COL3A1-206ENST00000487010 DACH1Q9UI36 760 aa13.98□□□□□ -0.17
COL3A1-206ENST00000487010 RIPOR2Q9Y4F9 1068 aa13.98□□□□□ -0.17
COL3A1-206ENST00000487010 PAPPAQ13219 1627 aa13.98□□□□□ -0.17
COL3A1-206ENST00000487010 MYO5AQ9Y4I1 1855 aaKnown RBP13.98□□□□□ -0.17
COL3A1-206ENST00000487010 UBE2Q2LH0YL09 131 aa13.97□□□□□ -0.17
COL3A1-206ENST00000487010 FMNL1O95466 1100 aaPredicted RBP13.97□□□□□ -0.17
COL3A1-206ENST00000487010 ATF3P18847 181 aa13.97□□□□□ -0.17
COL3A1-206ENST00000487010 PTPREP23469 700 aa13.97□□□□□ -0.17
COL3A1-206ENST00000487010 TOB1P50616 345 aaPredicted RBP13.97□□□□□ -0.17
COL3A1-206ENST00000487010 MORC3Q14149 939 aa13.97□□□□□ -0.17
COL3A1-206ENST00000487010 MYL10Q9BUA6 226 aa13.97□□□□□ -0.17
COL3A1-206ENST00000487010 FBXO2Q9UK22 296 aaPredicted RBP13.97□□□□□ -0.17
COL3A1-206ENST00000487010 PRR29P0C7W0 189 aa13.97□□□□□ -0.17
COL3A1-206ENST00000487010 LIFRP42702 1097 aa13.97□□□□□ -0.17
COL3A1-206ENST00000487010 TRIML1Q8N9V2 468 aa13.97□□□□□ -0.17
COL3A1-206ENST00000487010 ZCRB1Q8TBF4 217 aaKnown RBP13.97□□□□□ -0.17
COL3A1-206ENST00000487010 WASF1Q92558 559 aa13.97□□□□□ -0.17
COL3A1-206ENST00000487010 RABGGTAQ92696 567 aa13.97□□□□□ -0.17
COL3A1-206ENST00000487010 SMARCE1Q969G3 411 aa13.97□□□□□ -0.17
COL3A1-206ENST00000487010 PODXL2Q9NZ53 605 aa13.97□□□□□ -0.17
COL3A1-206ENST00000487010 RAI14Q9P0K7 980 aa13.97□□□□□ -0.17
COL3A1-206ENST00000487010 SERTAD1Q9UHV2 236 aa13.97□□□□□ -0.17
COL3A1-206ENST00000487010 PCDH11XQ9BZA7 1347 aa13.97□□□□□ -0.17
COL3A1-206ENST00000487010 PCDH11YQ9BZA8 1340 aa13.97□□□□□ -0.17
COL3A1-206ENST00000487010 ZNF532Q9HCE3 1301 aa13.97□□□□□ -0.17
COL3A1-206ENST00000487010 BTBD18B2RXH4 712 aa13.96□□□□□ -0.17
COL3A1-206ENST00000487010 POLR2DO15514 142 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms