RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 CDCA5Q96FF9 252 aa15.37■□□□□ 0.05
HDAC6-229ENST00000486665 PRMT6Q96LA8 375 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-229ENST00000486665 ZDHHC15Q96MV8 337 aa15.37■□□□□ 0.05
HDAC6-229ENST00000486665 RIOK1Q9BRS2 568 aaKnown RBP15.37■□□□□ 0.05
HDAC6-229ENST00000486665 ESYT1Q9BSJ8 1104 aa15.37■□□□□ 0.05
HDAC6-229ENST00000486665 ARMT1Q9H993 441 aa15.37■□□□□ 0.05
HDAC6-229ENST00000486665 AATFQ9NY61 560 aaKnown RBP eCLIP15.37■□□□□ 0.052e-7■■■■■ 44.3
HDAC6-229ENST00000486665 MAGEB6P1A0A0J9YX57 407 aa15.36■□□□□ 0.05
HDAC6-229ENST00000486665 SGSM2O43147 1006 aa15.36■□□□□ 0.05
HDAC6-229ENST00000486665 MBD4O95243 580 aa15.36■□□□□ 0.05
HDAC6-229ENST00000486665 BTDP43251 543 aa15.36■□□□□ 0.05
HDAC6-229ENST00000486665 LCORLQ8N3X6 602 aa15.36■□□□□ 0.05
HDAC6-229ENST00000486665 MTMR14Q8NCE2 650 aa15.36■□□□□ 0.05
HDAC6-229ENST00000486665 ZBED3Q96IU2 234 aaPredicted RBP15.36■□□□□ 0.05
HDAC6-229ENST00000486665 STRBPQ96SI9 672 aaKnown RBP15.36■□□□□ 0.05
HDAC6-229ENST00000486665 MYOZ2Q9NPC6 264 aa15.36■□□□□ 0.05
HDAC6-229ENST00000486665 AK9Q5TCS8 1911 aa15.35■□□□□ 0.05
HDAC6-229ENST00000486665 GPAA1O43292 621 aa15.35■□□□□ 0.05
HDAC6-229ENST00000486665 MMP14P50281 582 aa15.35■□□□□ 0.05
HDAC6-229ENST00000486665 ZNF157P51786 506 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-229ENST00000486665 RHBDL3P58872 404 aa15.35■□□□□ 0.05
HDAC6-229ENST00000486665 MLLT1Q03111 559 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-229ENST00000486665 DLGAP5Q15398 846 aa15.35■□□□□ 0.05
HDAC6-229ENST00000486665 ANGEL2Q5VTE6 544 aaKnown RBP15.35■□□□□ 0.05
HDAC6-229ENST00000486665 C2orf69Q8N8R5 385 aa15.35■□□□□ 0.05
HDAC6-229ENST00000486665 SH3RF3Q8TEJ3 882 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-229ENST00000486665 RUFY2Q8WXA3 655 aa15.35■□□□□ 0.05
HDAC6-229ENST00000486665 USP40Q9NVE5 1235 aa15.35■□□□□ 0.05
HDAC6-229ENST00000486665 SPDYE2BA6NHP3 402 aa15.34■□□□□ 0.05
HDAC6-229ENST00000486665 PRKAB2O43741 272 aa15.34■□□□□ 0.05
HDAC6-229ENST00000486665 SEC24BO95487 1268 aa15.34■□□□□ 0.05
HDAC6-229ENST00000486665 BAG3O95817 575 aa15.34■□□□□ 0.05
HDAC6-229ENST00000486665 SLC10A3P09131 477 aa15.34■□□□□ 0.05
HDAC6-229ENST00000486665 SPDYE6P0CI01 402 aa15.34■□□□□ 0.05
HDAC6-229ENST00000486665 NBPF9Q3BBW0 867 aa15.34■□□□□ 0.05
HDAC6-229ENST00000486665 CDC42EP5Q6NZY7 148 aa15.34■□□□□ 0.05
HDAC6-229ENST00000486665 CASC1Q6TDU7 716 aa15.34■□□□□ 0.05
HDAC6-229ENST00000486665 MOB2Q70IA6 237 aa15.34■□□□□ 0.05
HDAC6-229ENST00000486665 RNF186Q9NXI6 227 aa15.34■□□□□ 0.05
HDAC6-229ENST00000486665 MAST2Q6P0Q8 1798 aa15.34■□□□□ 0.05
HDAC6-229ENST00000486665 MYH7P12883 1935 aa15.33■□□□□ 0.05
HDAC6-229ENST00000486665 WNT10BO00744 389 aa15.33■□□□□ 0.04
HDAC6-229ENST00000486665 TRPA1O75762 1119 aa15.33■□□□□ 0.04
HDAC6-229ENST00000486665 VPS53Q5VIR6 699 aa15.33■□□□□ 0.04
HDAC6-229ENST00000486665 SULF1Q8IWU6 871 aa15.33■□□□□ 0.04
HDAC6-229ENST00000486665 CSRNP1Q96S65 589 aa15.33■□□□□ 0.04
HDAC6-229ENST00000486665 NOL10Q9BSC4 688 aaKnown RBP15.33■□□□□ 0.04
HDAC6-229ENST00000486665 TDRD3Q9H7E2 651 aaKnown RBP15.33■□□□□ 0.04
HDAC6-229ENST00000486665 CCDC171Q6TFL3 1326 aa15.33■□□□□ 0.04
HDAC6-229ENST00000486665 MYH2Q9UKX2 1941 aa15.33■□□□□ 0.04
HDAC6-229ENST00000486665 PAPPA2Q9BXP8 1791 aa15.32■□□□□ 0.04
HDAC6-229ENST00000486665 FOXP2O15409 715 aa15.32■□□□□ 0.04
HDAC6-229ENST00000486665 PTH1RQ03431 593 aa15.32■□□□□ 0.04
HDAC6-229ENST00000486665 PRAMEF18Q5VWM3 479 aa15.32■□□□□ 0.04
HDAC6-229ENST00000486665 RASAL3Q86YV0 1011 aa15.32■□□□□ 0.04
HDAC6-229ENST00000486665 CCDC102AQ96A19 550 aa15.32■□□□□ 0.04
HDAC6-229ENST00000486665 SLC4A4Q9Y6R1 1079 aa15.32■□□□□ 0.04
HDAC6-229ENST00000486665 RAD50Q92878 1312 aa15.32■□□□□ 0.04
HDAC6-229ENST00000486665 CLRN2A0PK11 232 aa15.31■□□□□ 0.04
HDAC6-229ENST00000486665 GSG1L2A8MUP6 293 aa15.31■□□□□ 0.04
HDAC6-229ENST00000486665 PATL2C9JE40 543 aaKnown RBP15.31■□□□□ 0.04
HDAC6-229ENST00000486665 WDHD1O75717 1129 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-229ENST00000486665 CACNB3P54284 484 aa15.31■□□□□ 0.04
HDAC6-229ENST00000486665 TEX11Q8IYF3 940 aa15.31■□□□□ 0.04
HDAC6-229ENST00000486665 SDR42E1Q8WUS8 393 aa15.31■□□□□ 0.04
HDAC6-229ENST00000486665 LSG1Q9H089 658 aaKnown RBP15.31■□□□□ 0.04
HDAC6-229ENST00000486665 SAGE1Q9NXZ1 904 aa15.31■□□□□ 0.04
HDAC6-229ENST00000486665 ZNF70Q9UC06 446 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-229ENST00000486665 SLC34A2O95436 690 aa15.3■□□□□ 0.04
HDAC6-229ENST00000486665 HSPD1P10809 573 aaKnown RBP15.3■□□□□ 0.04
HDAC6-229ENST00000486665 PLCG2P16885 1265 aa15.3■□□□□ 0.04
HDAC6-229ENST00000486665 NFIAQ12857 509 aa15.3■□□□□ 0.04
HDAC6-229ENST00000486665 SPDYE2Q495Y8 402 aa15.3■□□□□ 0.04
HDAC6-229ENST00000486665 TGFBRAP1Q8WUH2 860 aa15.3■□□□□ 0.04
HDAC6-229ENST00000486665 BACH2Q9BYV9 841 aa15.3■□□□□ 0.04
HDAC6-229ENST00000486665 CRNKL1Q9BZJ0 848 aaKnown RBP15.3■□□□□ 0.04
HDAC6-229ENST00000486665 MFAP1P55081 439 aaKnown RBP15.29■□□□□ 0.04
HDAC6-229ENST00000486665 CERS3Q8IU89 383 aa15.29■□□□□ 0.04
HDAC6-229ENST00000486665 MAPKAPK5Q8IW41 473 aa15.29■□□□□ 0.04
HDAC6-229ENST00000486665 ZFPM1Q8IX07 1006 aa15.29■□□□□ 0.04
HDAC6-229ENST00000486665 EPB41L4AQ9HCS5 686 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-229ENST00000486665 ANO2Q9NQ90 1003 aa15.29■□□□□ 0.04
HDAC6-229ENST00000486665 DDX4Q9NQI0 724 aaKnown RBP15.29■□□□□ 0.04
HDAC6-229ENST00000486665 FAM198AQ9UFP1 575 aa15.29■□□□□ 0.04
HDAC6-229ENST00000486665 UBE2Q2LH0YL09 131 aa15.28■□□□□ 0.04
HDAC6-229ENST00000486665 APPP05067 770 aa15.28■□□□□ 0.04
HDAC6-229ENST00000486665 GNAT2P19087 354 aa15.28■□□□□ 0.04
HDAC6-229ENST00000486665 USP5P45974 858 aa15.28■□□□□ 0.04
HDAC6-229ENST00000486665 SOX10P56693 466 aa15.28■□□□□ 0.04
HDAC6-229ENST00000486665 PICALMQ13492 652 aa15.28■□□□□ 0.04
HDAC6-229ENST00000486665 KIAA1211Q6ZU35 1233 aa15.28■□□□□ 0.04
HDAC6-229ENST00000486665 IFNL3Q8IZI9 196 aa15.28■□□□□ 0.04
HDAC6-229ENST00000486665 IDI2Q9BXS1 227 aa15.28■□□□□ 0.04
HDAC6-229ENST00000486665 PITPNM2Q9BZ72 1349 aa15.27■□□□□ 0.04
HDAC6-229ENST00000486665 TCP10L2B9ZVM9 353 aa15.27■□□□□ 0.04
HDAC6-229ENST00000486665 MYO1BO43795 1136 aa15.27■□□□□ 0.04
HDAC6-229ENST00000486665 FGAP02671 866 aa15.27■□□□□ 0.04
HDAC6-229ENST00000486665 ALX1Q15699 326 aa15.27■□□□□ 0.04
HDAC6-229ENST00000486665 MAP4K1Q92918 833 aa15.27■□□□□ 0.04
HDAC6-229ENST00000486665 DSCC1Q9BVC3 393 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms