RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 ERVK-24P63145 666 aa6.47□□□□□ -1.37
R3HDM1-217ENST00000486532 PLCB3Q01970 1234 aa6.47□□□□□ -1.37
R3HDM1-217ENST00000486532 PRKCQQ04759 706 aa6.47□□□□□ -1.37
R3HDM1-217ENST00000486532 TTLL4Q14679 1199 aa6.47□□□□□ -1.37
R3HDM1-217ENST00000486532 SCARA3Q6AZY7 606 aa6.47□□□□□ -1.37
R3HDM1-217ENST00000486532 OGFOD2Q6N063 350 aa6.47□□□□□ -1.37
R3HDM1-217ENST00000486532 NFXL1Q6ZNB6 911 aa6.47□□□□□ -1.37
R3HDM1-217ENST00000486532 SULF2Q8IWU5 870 aa6.47□□□□□ -1.37
R3HDM1-217ENST00000486532 RETREG2Q8NC44 543 aa6.47□□□□□ -1.37
R3HDM1-217ENST00000486532 RNF214Q8ND24 703 aa6.47□□□□□ -1.37
R3HDM1-217ENST00000486532 KRTAP4-2Q9BYR5 136 aa6.47□□□□□ -1.37
R3HDM1-217ENST00000486532 BCO2Q9BYV7 579 aa6.47□□□□□ -1.37
R3HDM1-217ENST00000486532 CEP44Q9C0F1 390 aa6.47□□□□□ -1.37
R3HDM1-217ENST00000486532 DISC1Q9NRI5 854 aa6.47□□□□□ -1.37
R3HDM1-217ENST00000486532 BIN2Q9UBW5 565 aaPredicted RBP6.47□□□□□ -1.37
R3HDM1-217ENST00000486532 HMGB1P09429 215 aaKnown RBP6.46□□□□□ -1.38
R3HDM1-217ENST00000486532 CDK5R2Q13319 367 aa6.46□□□□□ -1.38
R3HDM1-217ENST00000486532 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.46□□□□□ -1.38
R3HDM1-217ENST00000486532 FBF1Q8TES7 1133 aa6.46□□□□□ -1.38
R3HDM1-217ENST00000486532 WDR89Q96FK6 387 aaPredicted RBP6.46□□□□□ -1.38
R3HDM1-217ENST00000486532 ACSBG1Q96GR2 724 aa6.46□□□□□ -1.38
R3HDM1-217ENST00000486532 HRASLS5Q96KN8 279 aa6.46□□□□□ -1.38
R3HDM1-217ENST00000486532 GTF2IRD1Q9UHL9 959 aa6.46□□□□□ -1.38
R3HDM1-217ENST00000486532 GNEQ9Y223 722 aaKnown RBP6.46□□□□□ -1.38
R3HDM1-217ENST00000486532 AKAP2Q9Y2D5 859 aa6.46□□□□□ -1.38
R3HDM1-217ENST00000486532 PCDHGC5Q9Y5F6 944 aa6.46□□□□□ -1.38
R3HDM1-217ENST00000486532 GIPC1O14908 333 aa6.45□□□□□ -1.38
R3HDM1-217ENST00000486532 HCLS1P14317 486 aaPredicted RBP6.45□□□□□ -1.38
R3HDM1-217ENST00000486532 GSTT1P30711 240 aa6.45□□□□□ -1.38
R3HDM1-217ENST00000486532 JAG1P78504 1218 aa6.45□□□□□ -1.38
R3HDM1-217ENST00000486532 ZNF792Q3KQV3 632 aa6.45□□□□□ -1.38
R3HDM1-217ENST00000486532 TMC7Q7Z402 723 aa6.45□□□□□ -1.38
R3HDM1-217ENST00000486532 ATG4DQ86TL0 474 aaPredicted RBP6.45□□□□□ -1.38
R3HDM1-217ENST00000486532 PDZD3Q86UT5 571 aa6.45□□□□□ -1.38
R3HDM1-217ENST00000486532 KCT2Q8NC54 265 aa6.45□□□□□ -1.38
R3HDM1-217ENST00000486532 PPM1HQ9ULR3 514 aa6.45□□□□□ -1.38
R3HDM1-217ENST00000486532 SNX11Q9Y5W9 270 aa6.45□□□□□ -1.38
R3HDM1-217ENST00000486532 BRD1O95696 1058 aa6.44□□□□□ -1.38
R3HDM1-217ENST00000486532 CEACAM5P06731 702 aa6.44□□□□□ -1.38
R3HDM1-217ENST00000486532 FUT4P22083 530 aa6.44□□□□□ -1.38
R3HDM1-217ENST00000486532 LRRC14Q15048 493 aa6.44□□□□□ -1.38
R3HDM1-217ENST00000486532 ANGEL2Q5VTE6 544 aaKnown RBP6.44□□□□□ -1.38
R3HDM1-217ENST00000486532 ZSCAN29Q8IWY8 852 aaPredicted RBP6.44□□□□□ -1.38
R3HDM1-217ENST00000486532 PLD6Q8N2A8 252 aaKnown RBP6.44□□□□□ -1.38
R3HDM1-217ENST00000486532 PI4K2BQ8TCG2 481 aa6.44□□□□□ -1.38
R3HDM1-217ENST00000486532 ARID3AQ99856 593 aa6.44□□□□□ -1.38
R3HDM1-217ENST00000486532 DUSP23Q9BVJ7 150 aa6.44□□□□□ -1.38
R3HDM1-217ENST00000486532 CBX8Q9HC52 389 aa6.44□□□□□ -1.38
R3HDM1-217ENST00000486532 PICK1Q9NRD5 415 aa6.44□□□□□ -1.38
R3HDM1-217ENST00000486532 PNMA6FA0A0J9YX94 578 aa6.43□□□□□ -1.38
R3HDM1-217ENST00000486532 MAPK1P28482 360 aa6.43□□□□□ -1.38
R3HDM1-217ENST00000486532 ENOX2Q16206 610 aaKnown RBP6.43□□□□□ -1.38
R3HDM1-217ENST00000486532 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.43□□□□□ -1.38
R3HDM1-217ENST00000486532 ZC3H12AQ5D1E8 599 aaKnown RBP6.43□□□□□ -1.38
R3HDM1-217ENST00000486532 MAP1SQ66K74 1059 aaPredicted RBP6.43□□□□□ -1.38
R3HDM1-217ENST00000486532 ASB11Q8WXH4 323 aa6.43□□□□□ -1.38
R3HDM1-217ENST00000486532 CDK11AQ9UQ88 783 aaPredicted RBP6.43□□□□□ -1.38
R3HDM1-217ENST00000486532 IGF2BP3O00425 579 aaKnown RBP eCLIP6.42□□□□□ -1.38
R3HDM1-217ENST00000486532 TREHO43280 583 aa6.42□□□□□ -1.38
R3HDM1-217ENST00000486532 TRIM37O94972 964 aa6.42□□□□□ -1.38
R3HDM1-217ENST00000486532 PAPLNO95428 1278 aa6.42□□□□□ -1.38
R3HDM1-217ENST00000486532 COL19A1Q14993 1142 aa6.42□□□□□ -1.38
R3HDM1-217ENST00000486532 AOC3Q16853 763 aa6.42□□□□□ -1.38
R3HDM1-217ENST00000486532 ALG1LQ6GMV1 187 aa6.42□□□□□ -1.38
R3HDM1-217ENST00000486532 NXPE4Q6UWF7 544 aa6.42□□□□□ -1.38
R3HDM1-217ENST00000486532 ZNF574Q6ZN55 896 aaPredicted RBP6.42□□□□□ -1.38
R3HDM1-217ENST00000486532 CDC37L1Q7L3B6 337 aa6.42□□□□□ -1.38
R3HDM1-217ENST00000486532 SPRED2Q7Z698 418 aa6.42□□□□□ -1.38
R3HDM1-217ENST00000486532 ISL2Q96A47 359 aa6.42□□□□□ -1.38
R3HDM1-217ENST00000486532 RC3H2Q9HBD1 1191 aaKnown RBP6.42□□□□□ -1.38
R3HDM1-217ENST00000486532 FANCGO15287 622 aa6.41□□□□□ -1.38
R3HDM1-217ENST00000486532 CD8BP10966 210 aa6.41□□□□□ -1.38
R3HDM1-217ENST00000486532 OXCT1P55809 520 aa6.41□□□□□ -1.38
R3HDM1-217ENST00000486532 ATP2B2Q01814 1243 aa6.41□□□□□ -1.38
R3HDM1-217ENST00000486532 ZNF252P-AS1Q0IIN9 211 aa6.41□□□□□ -1.38
R3HDM1-217ENST00000486532 BNIP3Q12983 259 aa6.41□□□□□ -1.38
R3HDM1-217ENST00000486532 DSC3Q14574 896 aa6.41□□□□□ -1.38
R3HDM1-217ENST00000486532 TOP6BLQ8N6T0 577 aa6.41□□□□□ -1.38
R3HDM1-217ENST00000486532 FAM181AQ8N9Y4 354 aa6.41□□□□□ -1.38
R3HDM1-217ENST00000486532 GPBAR1Q8TDU6 330 aa6.41□□□□□ -1.38
R3HDM1-217ENST00000486532 ANKRD24Q8TF21 1146 aa6.41□□□□□ -1.38
R3HDM1-217ENST00000486532 NECAB3Q96P71 396 aaPredicted RBP6.41□□□□□ -1.38
R3HDM1-217ENST00000486532 FARP2O94887 1054 aaPredicted RBP6.4□□□□□ -1.38
R3HDM1-217ENST00000486532 C8AP07357 584 aa6.4□□□□□ -1.38
R3HDM1-217ENST00000486532 SLC23A3Q6PIS1 610 aa6.4□□□□□ -1.38
R3HDM1-217ENST00000486532 TMEM40Q8WWA1 233 aa6.4□□□□□ -1.38
R3HDM1-217ENST00000486532 CYP8B1Q9UNU6 501 aa6.4□□□□□ -1.38
R3HDM1-217ENST00000486532 GNAT3A8MTJ3 354 aa6.39□□□□□ -1.39
R3HDM1-217ENST00000486532 NEFMP07197 916 aa6.39□□□□□ -1.39
R3HDM1-217ENST00000486532 TRIM26Q12899 539 aaPredicted RBP6.39□□□□□ -1.39
R3HDM1-217ENST00000486532 PKN1Q16512 942 aa6.39□□□□□ -1.39
R3HDM1-217ENST00000486532 LLGL2Q6P1M3 1020 aa6.39□□□□□ -1.39
R3HDM1-217ENST00000486532 PI16Q6UXB8 463 aa6.39□□□□□ -1.39
R3HDM1-217ENST00000486532 FAM168AQ92567 244 aa6.39□□□□□ -1.39
R3HDM1-217ENST00000486532 SLC38A3Q99624 504 aa6.39□□□□□ -1.39
R3HDM1-217ENST00000486532 TNKS2Q9H2K2 1166 aa6.39□□□□□ -1.39
R3HDM1-217ENST00000486532 PRDM10Q9NQV6 1147 aa6.39□□□□□ -1.39
R3HDM1-217ENST00000486532 CACNA2D2Q9NY47 1150 aa6.39□□□□□ -1.39
R3HDM1-217ENST00000486532 FAM53CQ9NYF3 392 aa6.39□□□□□ -1.39
R3HDM1-217ENST00000486532 SPG7Q9UQ90 795 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms