RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 CNKSR2Q8WXI2 1034 aa22.38■■□□□ 1.17
CLDN11-206ENST00000486429 DDX4Q9NQI0 724 aaKnown RBP22.38■■□□□ 1.17
CLDN11-206ENST00000486429 ATRNL1Q5VV63 1379 aa22.38■■□□□ 1.17
CLDN11-206ENST00000486429 IGSF3O75054 1194 aa22.37■■□□□ 1.17
CLDN11-206ENST00000486429 ZKSCAN4Q969J2 545 aaPredicted RBP22.37■■□□□ 1.17
CLDN11-206ENST00000486429 CFHR5Q9BXR6 569 aa22.37■■□□□ 1.17
CLDN11-206ENST00000486429 PIH1D3Q9NQM4 214 aaKnown RBP22.37■■□□□ 1.17
CLDN11-206ENST00000486429 COL2A1P02458 1487 aaPredicted RBP22.36■■□□□ 1.17
CLDN11-206ENST00000486429 IGF2BP3O00425 579 aaKnown RBP eCLIP22.36■■□□□ 1.17
CLDN11-206ENST00000486429 INPP5BP32019 993 aa22.36■■□□□ 1.17
CLDN11-206ENST00000486429 ERO1BQ86YB8 467 aa22.36■■□□□ 1.17
CLDN11-206ENST00000486429 MYO5AQ9Y4I1 1855 aaKnown RBP22.35■■□□□ 1.17
CLDN11-206ENST00000486429 NPM3O75607 178 aaKnown RBP22.35■■□□□ 1.17
CLDN11-206ENST00000486429 IFIT2P09913 472 aaKnown RBP22.35■■□□□ 1.17
CLDN11-206ENST00000486429 RRP1P56182 461 aaKnown RBP22.35■■□□□ 1.17
CLDN11-206ENST00000486429 OTUD7BQ6GQQ9 843 aa22.35■■□□□ 1.17
CLDN11-206ENST00000486429 SH3BP5LQ7L8J4 393 aa22.35■■□□□ 1.17
CLDN11-206ENST00000486429 TEX11Q8IYF3 940 aa22.35■■□□□ 1.17
CLDN11-206ENST00000486429 TESPA1A2RU30 521 aaPredicted RBP22.34■■□□□ 1.17
CLDN11-206ENST00000486429 IDH1O75874 414 aaKnown RBP22.34■■□□□ 1.17
CLDN11-206ENST00000486429 BAG3O95817 575 aa22.34■■□□□ 1.17
CLDN11-206ENST00000486429 GTF2A2P52657 109 aa22.34■■□□□ 1.17
CLDN11-206ENST00000486429 DGKZQ13574 1117 aa22.34■■□□□ 1.17
CLDN11-206ENST00000486429 NOM1Q5C9Z4 860 aaKnown RBP22.34■■□□□ 1.17
CLDN11-206ENST00000486429 ABHD8Q96I13 439 aa22.34■■□□□ 1.17
CLDN11-206ENST00000486429 MCOLN1Q9GZU1 580 aa22.34■■□□□ 1.17
CLDN11-206ENST00000486429 ZNF112Q9UJU3 913 aa22.34■■□□□ 1.17
CLDN11-206ENST00000486429 CCL15-CCL14A0A0B4J2E2 113 aa22.33■■□□□ 1.17
CLDN11-206ENST00000486429 DDTLA6NHG4 134 aaPredicted RBP22.33■■□□□ 1.17
CLDN11-206ENST00000486429 PLCG2P16885 1265 aa22.33■■□□□ 1.17
CLDN11-206ENST00000486429 PPIL2Q13356 520 aa22.33■■□□□ 1.17
CLDN11-206ENST00000486429 CCL15Q16663 113 aa22.33■■□□□ 1.17
CLDN11-206ENST00000486429 ZNF296Q8WUU4 475 aaPredicted RBP22.33■■□□□ 1.17
CLDN11-206ENST00000486429 MS4A4AQ96JQ5 239 aa22.33■■□□□ 1.17
CLDN11-206ENST00000486429 BCL11AQ9H165 835 aa22.33■■□□□ 1.17
CLDN11-206ENST00000486429 AATFQ9NY61 560 aaKnown RBP eCLIP22.33■■□□□ 1.17
CLDN11-206ENST00000486429 NDUFB9Q9Y6M9 179 aa22.33■■□□□ 1.17
CLDN11-206ENST00000486429 GPR25O00155 361 aa22.32■■□□□ 1.16
CLDN11-206ENST00000486429 NOL9Q5SY16 702 aaKnown RBP22.32■■□□□ 1.16
CLDN11-206ENST00000486429 ADGRA1Q86SQ6 560 aa22.32■■□□□ 1.16
CLDN11-206ENST00000486429 SH3RF3Q8TEJ3 882 aaPredicted RBP22.32■■□□□ 1.16
CLDN11-206ENST00000486429 BRI3BPQ8WY22 251 aa22.32■■□□□ 1.16
CLDN11-206ENST00000486429 OSBPL5Q9H0X9 879 aaPredicted RBP22.32■■□□□ 1.16
CLDN11-206ENST00000486429 PPATQ06203 517 aa22.31■■□□□ 1.16
CLDN11-206ENST00000486429 IRF6O14896 467 aa22.3■■□□□ 1.16
CLDN11-206ENST00000486429 CETPP11597 493 aa22.3■■□□□ 1.16
CLDN11-206ENST00000486429 CYP7A1P22680 504 aa22.3■■□□□ 1.16
CLDN11-206ENST00000486429 PPP4CP60510 307 aa22.3■■□□□ 1.16
CLDN11-206ENST00000486429 MAP3K12Q12852 859 aa22.3■■□□□ 1.16
CLDN11-206ENST00000486429 SNAPC2Q13487 334 aa22.3■■□□□ 1.16
CLDN11-206ENST00000486429 CTU1Q7Z7A3 348 aaKnown RBP22.3■■□□□ 1.16
CLDN11-206ENST00000486429 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.3■■□□□ 1.16
CLDN11-206ENST00000486429 PTPN18Q99952 460 aa22.3■■□□□ 1.16
CLDN11-206ENST00000486429 LRRCC1Q9C099 1032 aa22.3■■□□□ 1.16
CLDN11-206ENST00000486429 R3HDMLQ9H3Y0 253 aa22.3■■□□□ 1.16
CLDN11-206ENST00000486429 ANTXR1Q9H6X2 564 aa22.3■■□□□ 1.16
CLDN11-206ENST00000486429 DOCK1Q14185 1865 aa22.3■■□□□ 1.16
CLDN11-206ENST00000486429 FOCADQ5VW36 1801 aa22.29■■□□□ 1.16
CLDN11-206ENST00000486429 CDK5RAP2Q96SN8 1893 aa22.29■■□□□ 1.16
CLDN11-206ENST00000486429 FKTNO75072 461 aa22.29■■□□□ 1.16
CLDN11-206ENST00000486429 TTF1Q15361 905 aaPredicted RBP22.29■■□□□ 1.16
CLDN11-206ENST00000486429 TMED8Q6PL24 325 aaPredicted RBP22.29■■□□□ 1.16
CLDN11-206ENST00000486429 MAGEB6Q8N7X4 407 aa22.29■■□□□ 1.16
CLDN11-206ENST00000486429 PHF20L1A8MW92 1017 aa22.28■■□□□ 1.16
CLDN11-206ENST00000486429 MAP3K10Q02779 954 aa22.28■■□□□ 1.16
CLDN11-206ENST00000486429 CRHR2Q13324 411 aa22.28■■□□□ 1.16
CLDN11-206ENST00000486429 CERS3Q8IU89 383 aa22.28■■□□□ 1.16
CLDN11-206ENST00000486429 SCYL3Q8IZE3 742 aa22.28■■□□□ 1.16
CLDN11-206ENST00000486429 DNAJC2Q99543 621 aaKnown RBP22.28■■□□□ 1.16
CLDN11-206ENST00000486429 PICK1Q9NRD5 415 aa22.27■■□□□ 1.16
CLDN11-206ENST00000486429 FLT1P17948 1338 aa22.27■■□□□ 1.16
CLDN11-206ENST00000486429 FAM196BA6NMK8 535 aa22.26■■□□□ 1.15
CLDN11-206ENST00000486429 GOLIM4O00461 696 aa22.26■■□□□ 1.15
CLDN11-206ENST00000486429 SLURP2P0DP57 97 aa22.26■■□□□ 1.15
CLDN11-206ENST00000486429 TAF1CQ15572 869 aaPredicted RBP22.26■■□□□ 1.15
CLDN11-206ENST00000486429 MAPKAPK5Q8IW41 473 aa22.26■■□□□ 1.15
CLDN11-206ENST00000486429 MIGA1Q8NAN2 632 aa22.26■■□□□ 1.15
CLDN11-206ENST00000486429 TGFBRAP1Q8WUH2 860 aa22.26■■□□□ 1.15
CLDN11-206ENST00000486429 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.26■■□□□ 1.15
CLDN11-206ENST00000486429 TBC1D12O60347 775 aa22.25■■□□□ 1.15
CLDN11-206ENST00000486429 DYNLL1P63167 89 aaKnown RBP22.25■■□□□ 1.15
CLDN11-206ENST00000486429 FAM43AQ8N2R8 423 aa22.25■■□□□ 1.15
CLDN11-206ENST00000486429 DHX36Q9H2U1 1008 aaKnown RBP22.25■■□□□ 1.15
CLDN11-206ENST00000486429 ZCCHC17Q9NP64 241 aaKnown RBP22.25■■□□□ 1.15
CLDN11-206ENST00000486429 KCNH4Q9UQ05 1017 aa22.25■■□□□ 1.15
CLDN11-206ENST00000486429 SIPA1L1O43166 1804 aa22.24■■□□□ 1.15
CLDN11-206ENST00000486429 SMARCA5O60264 1052 aaPredicted RBP22.24■■□□□ 1.15
CLDN11-206ENST00000486429 CTNND1O60716 968 aaKnown RBP22.24■■□□□ 1.15
CLDN11-206ENST00000486429 DCTPP1Q9H773 170 aa22.24■■□□□ 1.15
CLDN11-206ENST00000486429 ZFYVE28Q9HCC9 887 aa22.24■■□□□ 1.15
CLDN11-206ENST00000486429 HERC5Q9UII4 1024 aaKnown RBP22.24■■□□□ 1.15
CLDN11-206ENST00000486429 BTBD19C9JJ37 291 aa22.23■■□□□ 1.15
CLDN11-206ENST00000486429 ATP5JP18859 108 aa22.23■■□□□ 1.15
CLDN11-206ENST00000486429 CRBNQ96SW2 442 aa22.23■■□□□ 1.15
CLDN11-206ENST00000486429 BOLA2Q9H3K6 86 aa22.23■■□□□ 1.15
CLDN11-206ENST00000486429 PAG1Q9NWQ8 432 aa22.23■■□□□ 1.15
CLDN11-206ENST00000486429 PI4KBQ9UBF8 816 aa22.23■■□□□ 1.15
CLDN11-206ENST00000486429 CCDC85CA6NKD9 419 aa22.22■■□□□ 1.15
CLDN11-206ENST00000486429 PDE6AP16499 860 aa22.22■■□□□ 1.15
CLDN11-206ENST00000486429 PTPRAP18433 802 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms