RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.56■■□□□ 1.2
PRPF40A-209ENST00000486100 BRI3BPQ8WY22 251 aa22.56■■□□□ 1.2
PRPF40A-209ENST00000486100 DDX4Q9NQI0 724 aaKnown RBP22.56■■□□□ 1.2
PRPF40A-209ENST00000486100 TLR7Q9NYK1 1049 aaKnown RBP22.56■■□□□ 1.2
PRPF40A-209ENST00000486100 RFX7Q2KHR2 1363 aa22.55■■□□□ 1.2
PRPF40A-209ENST00000486100 IGSF3O75054 1194 aa22.55■■□□□ 1.2
PRPF40A-209ENST00000486100 PPATQ06203 517 aa22.55■■□□□ 1.2
PRPF40A-209ENST00000486100 PDE3AQ14432 1141 aa22.55■■□□□ 1.2
PRPF40A-209ENST00000486100 PKN2Q16513 984 aaKnown RBP22.55■■□□□ 1.2
PRPF40A-209ENST00000486100 ZSCAN29Q8IWY8 852 aaPredicted RBP22.55■■□□□ 1.2
PRPF40A-209ENST00000486100 DDTLA6NHG4 134 aaPredicted RBP22.54■■□□□ 1.2
PRPF40A-209ENST00000486100 IRF6O14896 467 aa22.54■■□□□ 1.2
PRPF40A-209ENST00000486100 HMMRO75330 724 aa22.54■■□□□ 1.2
PRPF40A-209ENST00000486100 ZAP70P43403 619 aa22.54■■□□□ 1.2
PRPF40A-209ENST00000486100 MAP3K10Q02779 954 aa22.54■■□□□ 1.2
PRPF40A-209ENST00000486100 CRHR2Q13324 411 aa22.54■■□□□ 1.2
PRPF40A-209ENST00000486100 PPIL2Q13356 520 aa22.54■■□□□ 1.2
PRPF40A-209ENST00000486100 PICALMQ13492 652 aa22.54■■□□□ 1.2
PRPF40A-209ENST00000486100 SIRT2Q8IXJ6 389 aa22.54■■□□□ 1.2
PRPF40A-209ENST00000486100 CETPP11597 493 aa22.53■■□□□ 1.2
PRPF40A-209ENST00000486100 SNAPC2Q13487 334 aa22.53■■□□□ 1.2
PRPF40A-209ENST00000486100 NOL9Q5SY16 702 aaKnown RBP22.53■■□□□ 1.2
PRPF40A-209ENST00000486100 NAA16Q6N069 864 aaPredicted RBP22.53■■□□□ 1.2
PRPF40A-209ENST00000486100 RHPN1Q8TCX5 695 aa22.53■■□□□ 1.2
PRPF40A-209ENST00000486100 OTOFQ9HC10 1997 aa22.52■■□□□ 1.2
PRPF40A-209ENST00000486100 ATRNL1Q5VV63 1379 aa22.52■■□□□ 1.2
PRPF40A-209ENST00000486100 PHF20L1A8MW92 1017 aa22.52■■□□□ 1.2
PRPF40A-209ENST00000486100 C20orf194Q5TEA3 1177 aa22.52■■□□□ 1.2
PRPF40A-209ENST00000486100 AACSQ86V21 672 aa22.52■■□□□ 1.2
PRPF40A-209ENST00000486100 NOL10Q9BSC4 688 aaKnown RBP22.52■■□□□ 1.2
PRPF40A-209ENST00000486100 MYH2Q9UKX2 1941 aa22.52■■□□□ 1.2
PRPF40A-209ENST00000486100 BAG3O95817 575 aa22.51■■□□□ 1.19
PRPF40A-209ENST00000486100 FAM43AQ8N2R8 423 aa22.51■■□□□ 1.19
PRPF40A-209ENST00000486100 IL1RAPL2Q9NP60 686 aa22.51■■□□□ 1.19
PRPF40A-209ENST00000486100 PIH1D3Q9NQM4 214 aaKnown RBP22.51■■□□□ 1.19
PRPF40A-209ENST00000486100 PPP4CP60510 307 aa22.5■■□□□ 1.19
PRPF40A-209ENST00000486100 KIF1BPQ96EK5 621 aa22.5■■□□□ 1.19
PRPF40A-209ENST00000486100 ZFYVE28Q9HCC9 887 aa22.5■■□□□ 1.19
PRPF40A-209ENST00000486100 TBC1D12O60347 775 aa22.49■■□□□ 1.19
PRPF40A-209ENST00000486100 RAB11FIP3O75154 756 aa22.49■■□□□ 1.19
PRPF40A-209ENST00000486100 PLCG2P16885 1265 aa22.49■■□□□ 1.19
PRPF40A-209ENST00000486100 TAF1CQ15572 869 aaPredicted RBP22.49■■□□□ 1.19
PRPF40A-209ENST00000486100 TEX11Q8IYF3 940 aa22.49■■□□□ 1.19
PRPF40A-209ENST00000486100 CLASRPQ8N2M8 674 aaKnown RBP22.49■■□□□ 1.19
PRPF40A-209ENST00000486100 ZCCHC17Q9NP64 241 aaKnown RBP22.49■■□□□ 1.19
PRPF40A-209ENST00000486100 AATFQ9NY61 560 aaKnown RBP eCLIP22.49■■□□□ 1.19
PRPF40A-209ENST00000486100 KCNH4Q9UQ05 1017 aa22.49■■□□□ 1.19
PRPF40A-209ENST00000486100 BTBD19C9JJ37 291 aa22.48■■□□□ 1.19
PRPF40A-209ENST00000486100 SP3Q02447 781 aa22.48■■□□□ 1.19
PRPF40A-209ENST00000486100 SCYL3Q8IZE3 742 aa22.48■■□□□ 1.19
PRPF40A-209ENST00000486100 SH3RF3Q8TEJ3 882 aaPredicted RBP22.48■■□□□ 1.19
PRPF40A-209ENST00000486100 ERO1AQ96HE7 468 aa22.48■■□□□ 1.19
PRPF40A-209ENST00000486100 OSBPL5Q9H0X9 879 aaPredicted RBP22.48■■□□□ 1.19
PRPF40A-209ENST00000486100 LAMB1P07942 1786 aa22.48■■□□□ 1.19
PRPF40A-209ENST00000486100 APBB1O00213 710 aa22.47■■□□□ 1.19
PRPF40A-209ENST00000486100 CTNND1O60716 968 aaKnown RBP22.47■■□□□ 1.19
PRPF40A-209ENST00000486100 SLURP2P0DP57 97 aa22.47■■□□□ 1.19
PRPF40A-209ENST00000486100 FBXO46Q6PJ61 603 aaPredicted RBP22.47■■□□□ 1.19
PRPF40A-209ENST00000486100 ADGRA1Q86SQ6 560 aa22.47■■□□□ 1.19
PRPF40A-209ENST00000486100 HPS5Q9UPZ3 1129 aa22.47■■□□□ 1.19
PRPF40A-209ENST00000486100 CXCL11O14625 94 aa22.46■■□□□ 1.19
PRPF40A-209ENST00000486100 RGS19P49795 217 aa22.46■■□□□ 1.19
PRPF40A-209ENST00000486100 PICK1Q9NRD5 415 aa22.46■■□□□ 1.19
PRPF40A-209ENST00000486100 IDH1O75874 414 aaKnown RBP22.45■■□□□ 1.18
PRPF40A-209ENST00000486100 IFIT2P09913 472 aaKnown RBP22.45■■□□□ 1.18
PRPF40A-209ENST00000486100 PTPRAP18433 802 aa22.45■■□□□ 1.18
PRPF40A-209ENST00000486100 CYP7A1P22680 504 aa22.45■■□□□ 1.18
PRPF40A-209ENST00000486100 ANTXR1Q9H6X2 564 aa22.45■■□□□ 1.18
PRPF40A-209ENST00000486100 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.45■■□□□ 1.18
PRPF40A-209ENST00000486100 TRIM17Q9Y577 477 aa22.45■■□□□ 1.18
PRPF40A-209ENST00000486100 NDUFB9Q9Y6M9 179 aa22.45■■□□□ 1.18
PRPF40A-209ENST00000486100 ZHX2Q9Y6X8 837 aa22.45■■□□□ 1.18
PRPF40A-209ENST00000486100 TLR2O60603 784 aa22.44■■□□□ 1.18
PRPF40A-209ENST00000486100 COL2A1P02458 1487 aaPredicted RBP22.44■■□□□ 1.18
PRPF40A-209ENST00000486100 TMED8Q6PL24 325 aaPredicted RBP22.44■■□□□ 1.18
PRPF40A-209ENST00000486100 OTOP1Q7RTM1 612 aa22.44■■□□□ 1.18
PRPF40A-209ENST00000486100 ANKRD23Q86SG2 305 aa22.44■■□□□ 1.18
PRPF40A-209ENST00000486100 CD99L2Q8TCZ2 262 aa22.44■■□□□ 1.18
PRPF40A-209ENST00000486100 TGFBRAP1Q8WUH2 860 aa22.44■■□□□ 1.18
PRPF40A-209ENST00000486100 DHX36Q9H2U1 1008 aaKnown RBP22.44■■□□□ 1.18
PRPF40A-209ENST00000486100 AK9Q5TCS8 1911 aa22.43■■□□□ 1.18
PRPF40A-209ENST00000486100 MAP3K12Q12852 859 aa22.43■■□□□ 1.18
PRPF40A-209ENST00000486100 MOGSQ13724 837 aa22.43■■□□□ 1.18
PRPF40A-209ENST00000486100 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.43■■□□□ 1.18
PRPF40A-209ENST00000486100 PI4KBQ9UBF8 816 aa22.43■■□□□ 1.18
PRPF40A-209ENST00000486100 AFG3L2Q9Y4W6 797 aa22.43■■□□□ 1.18
PRPF40A-209ENST00000486100 TTF1Q15361 905 aaPredicted RBP22.42■■□□□ 1.18
PRPF40A-209ENST00000486100 CERS3Q8IU89 383 aa22.42■■□□□ 1.18
PRPF40A-209ENST00000486100 MAGEB6Q8N7X4 407 aa22.42■■□□□ 1.18
PRPF40A-209ENST00000486100 EFCC1Q9HA90 598 aa22.42■■□□□ 1.18
PRPF40A-209ENST00000486100 HERC5Q9UII4 1024 aaKnown RBP22.42■■□□□ 1.18
PRPF40A-209ENST00000486100 FAM196BA6NMK8 535 aa22.41■■□□□ 1.18
PRPF40A-209ENST00000486100 PDHXO00330 501 aa22.41■■□□□ 1.18
PRPF40A-209ENST00000486100 DYNLL1P63167 89 aaKnown RBP22.41■■□□□ 1.18
PRPF40A-209ENST00000486100 ARHGEF6Q15052 776 aa22.41■■□□□ 1.18
PRPF40A-209ENST00000486100 MAPKAPK5Q8IW41 473 aa22.41■■□□□ 1.18
PRPF40A-209ENST00000486100 FLT1P17948 1338 aa22.4■■□□□ 1.18
PRPF40A-209ENST00000486100 FASTKD5Q7L8L6 764 aaKnown RBP22.4■■□□□ 1.18
PRPF40A-209ENST00000486100 FOXP4Q8IVH2 680 aaPredicted RBP22.4■■□□□ 1.18
PRPF40A-209ENST00000486100 BCL11AQ9H165 835 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms