RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 USP5P45974 858 aa28.46■■■□□ 2.15
ABCF3-216ENST00000485921 MAPKAPK5Q8IW41 473 aa28.46■■■□□ 2.15
ABCF3-216ENST00000485921 RPAP1Q9BWH6 1393 aaPredicted RBP28.46■■■□□ 2.15
ABCF3-216ENST00000485921 ZSCAN29Q8IWY8 852 aaPredicted RBP28.45■■■□□ 2.14
ABCF3-216ENST00000485921 SEC62Q99442 399 aaKnown RBP28.45■■■□□ 2.14
ABCF3-216ENST00000485921 OSBPL5Q9H0X9 879 aaPredicted RBP28.45■■■□□ 2.14
ABCF3-216ENST00000485921 GBA2Q9HCG7 927 aaPredicted RBP28.45■■■□□ 2.14
ABCF3-216ENST00000485921 FLT1P17948 1338 aa28.44■■■□□ 2.14
ABCF3-216ENST00000485921 M0R2C6 588 aa28.44■■■□□ 2.14
ABCF3-216ENST00000485921 SH3BP5LQ7L8J4 393 aa28.44■■■□□ 2.14
ABCF3-216ENST00000485921 C2orf69Q8N8R5 385 aa28.44■■■□□ 2.14
ABCF3-216ENST00000485921 STRBPQ96SI9 672 aaKnown RBP28.43■■■□□ 2.14
ABCF3-216ENST00000485921 CREBZFQ9NS37 354 aa28.43■■■□□ 2.14
ABCF3-216ENST00000485921 SSC5DA1L4H1 1573 aa28.42■■■□□ 2.14
ABCF3-216ENST00000485921 DDTLA6NHG4 134 aaPredicted RBP28.42■■■□□ 2.14
ABCF3-216ENST00000485921 GPAA1O43292 621 aa28.42■■■□□ 2.14
ABCF3-216ENST00000485921 PRKAB2O43741 272 aa28.42■■■□□ 2.14
ABCF3-216ENST00000485921 PRKG1Q13976 671 aa28.42■■■□□ 2.14
ABCF3-216ENST00000485921 TTLL12Q14166 644 aaPredicted RBP28.42■■■□□ 2.14
ABCF3-216ENST00000485921 SDR42E1Q8WUS8 393 aa28.42■■■□□ 2.14
ABCF3-216ENST00000485921 HOOK2Q96ED9 719 aa28.42■■■□□ 2.14
ABCF3-216ENST00000485921 HELLSQ9NRZ9 838 aa28.42■■■□□ 2.14
ABCF3-216ENST00000485921 NMIQ13287 307 aaPredicted RBP28.41■■■□□ 2.14
ABCF3-216ENST00000485921 FAM227BQ96M60 508 aa28.41■■■□□ 2.14
ABCF3-216ENST00000485921 CSRNP1Q96S65 589 aa28.41■■■□□ 2.14
ABCF3-216ENST00000485921 SLC4A4Q9Y6R1 1079 aa28.41■■■□□ 2.14
ABCF3-216ENST00000485921 CDK5RAP2Q96SN8 1893 aa28.4■■■□□ 2.14
ABCF3-216ENST00000485921 AK9Q5TCS8 1911 aa28.4■■■□□ 2.14
ABCF3-216ENST00000485921 HIP1O00291 1037 aa28.4■■■□□ 2.14
ABCF3-216ENST00000485921 PPP1R12BO60237 982 aaPredicted RBP28.4■■■□□ 2.14
ABCF3-216ENST00000485921 FKBP1BP68106 108 aa28.4■■■□□ 2.14
ABCF3-216ENST00000485921 MOB2Q70IA6 237 aa28.4■■■□□ 2.14
ABCF3-216ENST00000485921 SAP30BPQ9UHR5 308 aaKnown RBP28.4■■■□□ 2.14
ABCF3-216ENST00000485921 ABT1Q9ULW3 272 aaKnown RBP28.4■■■□□ 2.14
ABCF3-216ENST00000485921 FZD1Q9UP38 647 aa28.4■■■□□ 2.14
ABCF3-216ENST00000485921 ATRNL1Q5VV63 1379 aa28.39■■■□□ 2.14
ABCF3-216ENST00000485921 A0A0D9SFI3 127 aa28.39■■■□□ 2.14
ABCF3-216ENST00000485921 ARMC9Q7Z3E5 817 aa28.39■■■□□ 2.14
ABCF3-216ENST00000485921 DHX36Q9H2U1 1008 aaKnown RBP28.39■■■□□ 2.14
ABCF3-216ENST00000485921 DIAPH3Q9NSV4 1193 aa28.39■■■□□ 2.14
ABCF3-216ENST00000485921 MKRN1Q9UHC7 482 aaKnown RBP28.39■■■□□ 2.14
ABCF3-216ENST00000485921 PALD1Q9ULE6 856 aa28.39■■■□□ 2.14
ABCF3-216ENST00000485921 TLL2Q9Y6L7 1015 aa28.39■■■□□ 2.14
ABCF3-216ENST00000485921 COL2A1P02458 1487 aaPredicted RBP28.39■■■□□ 2.13
ABCF3-216ENST00000485921 FOCADQ5VW36 1801 aa28.39■■■□□ 2.13
ABCF3-216ENST00000485921 HTRA3P83110 453 aa28.38■■■□□ 2.13
ABCF3-216ENST00000485921 MCMDC2Q4G0Z9 681 aa28.38■■■□□ 2.13
ABCF3-216ENST00000485921 BMP2KLQ5H9B9 411 aa28.38■■■□□ 2.13
ABCF3-216ENST00000485921 MIGA2Q7L4E1 593 aa28.38■■■□□ 2.13
ABCF3-216ENST00000485921 DCP1AQ9NPI6 582 aaPredicted RBP28.38■■■□□ 2.13
ABCF3-216ENST00000485921 ATP8A2Q9NTI2 1148 aa28.38■■■□□ 2.13
ABCF3-216ENST00000485921 ANGEL1Q9UNK9 670 aaKnown RBP28.38■■■□□ 2.13
ABCF3-216ENST00000485921 USP2O75604 605 aaPredicted RBP28.37■■■□□ 2.13
ABCF3-216ENST00000485921 GNAT2P19087 354 aa28.37■■■□□ 2.13
ABCF3-216ENST00000485921 DCAF15Q66K64 600 aa28.37■■■□□ 2.13
ABCF3-216ENST00000485921 CCDC129Q6ZRS4 1044 aa28.37■■■□□ 2.13
ABCF3-216ENST00000485921 SAPCD2Q86UD0 394 aa28.37■■■□□ 2.13
ABCF3-216ENST00000485921 PAPPA2Q9BXP8 1791 aa28.37■■■□□ 2.13
ABCF3-216ENST00000485921 UBE2Q2LH0YL09 131 aa28.36■■■□□ 2.13
ABCF3-216ENST00000485921 HUNKP57058 714 aa28.36■■■□□ 2.13
ABCF3-216ENST00000485921 CWC27Q6UX04 472 aaKnown RBP28.36■■■□□ 2.13
ABCF3-216ENST00000485921 MCM9Q9NXL9 1143 aa28.36■■■□□ 2.13
ABCF3-216ENST00000485921 SLC4A8Q2Y0W8 1093 aa28.35■■■□□ 2.13
ABCF3-216ENST00000485921 DDRGK1Q96HY6 314 aa28.35■■■□□ 2.13
ABCF3-216ENST00000485921 PI4KBQ9UBF8 816 aa28.35■■■□□ 2.13
ABCF3-216ENST00000485921 GSG1L2A8MUP6 293 aa28.34■■■□□ 2.13
ABCF3-216ENST00000485921 POLR3DP05423 398 aaPredicted RBP28.34■■■□□ 2.13
ABCF3-216ENST00000485921 IREB2P48200 963 aaKnown RBP28.34■■■□□ 2.13
ABCF3-216ENST00000485921 MAP3K11Q16584 847 aa28.34■■■□□ 2.13
ABCF3-216ENST00000485921 ZNF341Q9BYN7 854 aa28.34■■■□□ 2.13
ABCF3-216ENST00000485921 PATL2C9JE40 543 aaKnown RBP28.33■■■□□ 2.13
ABCF3-216ENST00000485921 APPP05067 770 aa28.33■■■□□ 2.13
ABCF3-216ENST00000485921 HLA-DOAP06340 250 aa28.33■■■□□ 2.13
ABCF3-216ENST00000485921 CHMLP26374 656 aa28.33■■■□□ 2.13
ABCF3-216ENST00000485921 SLURP2P0DP57 97 aa28.32■■■□□ 2.12
ABCF3-216ENST00000485921 MAP3K10Q02779 954 aa28.32■■■□□ 2.12
ABCF3-216ENST00000485921 LDLRAD1Q5T700 205 aa28.32■■■□□ 2.12
ABCF3-216ENST00000485921 GIMAP6Q6P9H5 292 aa28.32■■■□□ 2.12
ABCF3-216ENST00000485921 TTC6Q86TZ1 520 aa28.32■■■□□ 2.12
ABCF3-216ENST00000485921 ZNF589Q86UQ0 364 aaPredicted RBP28.32■■■□□ 2.12
ABCF3-216ENST00000485921 FOXP4Q8IVH2 680 aaPredicted RBP28.32■■■□□ 2.12
ABCF3-216ENST00000485921 KLRG1Q96E93 195 aa28.32■■■□□ 2.12
ABCF3-216ENST00000485921 MYH1P12882 1939 aa28.31■■■□□ 2.12
ABCF3-216ENST00000485921 TBC1D12O60347 775 aa28.31■■■□□ 2.12
ABCF3-216ENST00000485921 GTF3C3Q9Y5Q9 886 aa28.31■■■□□ 2.12
ABCF3-216ENST00000485921 NAV1Q8NEY1 1877 aa28.31■■■□□ 2.12
ABCF3-216ENST00000485921 CCDC171Q6TFL3 1326 aa28.3■■■□□ 2.12
ABCF3-216ENST00000485921 RASSF10A6NK89 507 aa28.3■■■□□ 2.12
ABCF3-216ENST00000485921 MFAP1P55081 439 aaKnown RBP28.3■■■□□ 2.12
ABCF3-216ENST00000485921 DEFB115Q30KQ5 88 aa28.3■■■□□ 2.12
ABCF3-216ENST00000485921 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.3■■■□□ 2.12
ABCF3-216ENST00000485921 HHIPL1Q96JK4 782 aa28.3■■■□□ 2.12
ABCF3-216ENST00000485921 WRNIP1Q96S55 665 aa28.3■■■□□ 2.12
ABCF3-216ENST00000485921 NACAP1Q9BZK3 213 aa28.3■■■□□ 2.12
ABCF3-216ENST00000485921 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.3■■■□□ 2.12
ABCF3-216ENST00000485921 EPB41L4AQ9HCS5 686 aaPredicted RBP28.3■■■□□ 2.12
ABCF3-216ENST00000485921 FAM196BA6NMK8 535 aa28.29■■■□□ 2.12
ABCF3-216ENST00000485921 USP17L12C9JPN9 530 aa28.29■■■□□ 2.12
ABCF3-216ENST00000485921 USP17L21D6R901 530 aa28.29■■■□□ 2.12
ABCF3-216ENST00000485921 CYP2D6P10635 497 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms