RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 NOL10Q9BSC4 688 aaKnown RBP13.48□□□□□ -0.25
SND1-212ENST00000485871 NAPBQ9H115 298 aa13.48□□□□□ -0.25
SND1-212ENST00000485871 ATP8A2Q9NTI2 1148 aa13.48□□□□□ -0.25
SND1-212ENST00000485871 TACC3Q9Y6A5 838 aa13.48□□□□□ -0.25
SND1-212ENST00000485871 ZC3H4Q9UPT8 1303 aaKnown RBP13.47□□□□□ -0.25
SND1-212ENST00000485871 GLTPD2A6NH11 291 aa13.47□□□□□ -0.25
SND1-212ENST00000485871 APPP05067 770 aa13.47□□□□□ -0.25
SND1-212ENST00000485871 USP17L8P0C7I0 530 aa13.47□□□□□ -0.25
SND1-212ENST00000485871 MMP14P50281 582 aa13.47□□□□□ -0.25
SND1-212ENST00000485871 RABEP1Q15276 862 aa13.47□□□□□ -0.25
SND1-212ENST00000485871 SBK1Q52WX2 424 aa13.47□□□□□ -0.25
SND1-212ENST00000485871 RNF20Q5VTR2 975 aa13.47□□□□□ -0.25
SND1-212ENST00000485871 CTR9Q6PD62 1173 aa13.47□□□□□ -0.25
SND1-212ENST00000485871 PRMT6Q96LA8 375 aaPredicted RBP13.47□□□□□ -0.25
SND1-212ENST00000485871 TM6SF1Q9BZW5 370 aa13.47□□□□□ -0.25
SND1-212ENST00000485871 ANAPC4Q9UJX5 808 aa13.47□□□□□ -0.25
SND1-212ENST00000485871 MYH8P13535 1937 aa13.47□□□□□ -0.25
SND1-212ENST00000485871 FLT1P17948 1338 aa13.46□□□□□ -0.25
SND1-212ENST00000485871 SPDYE2BA6NHP3 402 aa13.46□□□□□ -0.25
SND1-212ENST00000485871 SMIM22K7EJ46 135 aa13.46□□□□□ -0.25
SND1-212ENST00000485871 SPDYE6P0CI01 402 aa13.46□□□□□ -0.25
SND1-212ENST00000485871 GMPSP49915 693 aaPredicted RBP13.46□□□□□ -0.25
SND1-212ENST00000485871 HAND2P61296 217 aa13.46□□□□□ -0.25
SND1-212ENST00000485871 IMMTQ16891 758 aaKnown RBP13.46□□□□□ -0.25
SND1-212ENST00000485871 TBC1D10CQ8IV04 446 aa13.46□□□□□ -0.25
SND1-212ENST00000485871 TEX11Q8IYF3 940 aa13.46□□□□□ -0.25
SND1-212ENST00000485871 GPC2Q8N158 579 aa13.46□□□□□ -0.25
SND1-212ENST00000485871 TGFBRAP1Q8WUH2 860 aa13.46□□□□□ -0.25
SND1-212ENST00000485871 NACAP1Q9BZK3 213 aa13.46□□□□□ -0.25
SND1-212ENST00000485871 DDX4Q9NQI0 724 aaKnown RBP13.46□□□□□ -0.25
SND1-212ENST00000485871 HDAC9Q9UKV0 1011 aa13.46□□□□□ -0.25
SND1-212ENST00000485871 COL2A1P02458 1487 aaPredicted RBP13.46□□□□□ -0.25
SND1-212ENST00000485871 ROBO3Q96MS0 1386 aa13.45□□□□□ -0.26
SND1-212ENST00000485871 E7EWF7 191 aa13.45□□□□□ -0.26
SND1-212ENST00000485871 ZNF213O14771 459 aa13.45□□□□□ -0.26
SND1-212ENST00000485871 NPM3O75607 178 aaKnown RBP13.45□□□□□ -0.26
SND1-212ENST00000485871 CD2BP2O95400 341 aaKnown RBP13.45□□□□□ -0.26
SND1-212ENST00000485871 FGRP09769 529 aa13.45□□□□□ -0.26
SND1-212ENST00000485871 ZKSCAN1P17029 563 aaPredicted RBP13.45□□□□□ -0.26
SND1-212ENST00000485871 TDO2P48775 406 aa13.45□□□□□ -0.26
SND1-212ENST00000485871 EVX2Q03828 476 aa13.45□□□□□ -0.26
SND1-212ENST00000485871 NKX2-3Q8TAU0 364 aa13.45□□□□□ -0.26
SND1-212ENST00000485871 TTC14Q96N46 770 aa13.45□□□□□ -0.26
SND1-212ENST00000485871 IDI2Q9BXS1 227 aa13.45□□□□□ -0.26
SND1-212ENST00000485871 ZSWIM6Q9HCJ5 1215 aa13.45□□□□□ -0.26
SND1-212ENST00000485871 USP40Q9NVE5 1235 aa13.45□□□□□ -0.26
SND1-212ENST00000485871 ARPP21Q9UBL0 812 aaPredicted RBP13.45□□□□□ -0.26
SND1-212ENST00000485871 SCN4AP35499 1836 aa13.45□□□□□ -0.26
SND1-212ENST00000485871 CYP2D7A0A087X1C5 515 aa13.44□□□□□ -0.26
SND1-212ENST00000485871 USP17L12C9JPN9 530 aa13.44□□□□□ -0.26
SND1-212ENST00000485871 USP17L21D6R901 530 aa13.44□□□□□ -0.26
SND1-212ENST00000485871 EGFRP00533 1210 aa13.44□□□□□ -0.26
SND1-212ENST00000485871 CYP2D6P10635 497 aa13.44□□□□□ -0.26
SND1-212ENST00000485871 USP5P45974 858 aa13.44□□□□□ -0.26
SND1-212ENST00000485871 PPARAQ07869 468 aa13.44□□□□□ -0.26
SND1-212ENST00000485871 NFIAQ12857 509 aa13.44□□□□□ -0.26
SND1-212ENST00000485871 KRT32Q14532 448 aa13.44□□□□□ -0.26
SND1-212ENST00000485871 MAPKAPK5Q8IW41 473 aa13.44□□□□□ -0.26
SND1-212ENST00000485871 OGFOD1Q8N543 542 aa13.44□□□□□ -0.26
SND1-212ENST00000485871 STAG1Q8WVM7 1258 aa13.44□□□□□ -0.26
SND1-212ENST00000485871 JAKMIP1Q96N16 626 aaKnown RBP13.44□□□□□ -0.26
SND1-212ENST00000485871 TDRD3Q9H7E2 651 aaKnown RBP13.44□□□□□ -0.26
SND1-212ENST00000485871 MYOZ2Q9NPC6 264 aa13.44□□□□□ -0.26
SND1-212ENST00000485871 PRDM10Q9NQV6 1147 aa13.44□□□□□ -0.26
SND1-212ENST00000485871 FAM198AQ9UFP1 575 aa13.44□□□□□ -0.26
SND1-212ENST00000485871 GJA3Q9Y6H8 435 aa13.44□□□□□ -0.26
SND1-212ENST00000485871 GREB1LQ9C091 1923 aaPredicted RBP13.44□□□□□ -0.26
SND1-212ENST00000485871 POLR2AP24928 1970 aaKnown RBP13.43□□□□□ -0.26
SND1-212ENST00000485871 WNT10BO00744 389 aa13.43□□□□□ -0.26
SND1-212ENST00000485871 FOXN1O15353 648 aa13.43□□□□□ -0.26
SND1-212ENST00000485871 CPA1P15085 419 aa13.43□□□□□ -0.26
SND1-212ENST00000485871 RBM5P52756 815 aaKnown RBP eCLIP13.43□□□□□ -0.26
SND1-212ENST00000485871 CTDSPL2Q05D32 466 aa13.43□□□□□ -0.26
SND1-212ENST00000485871 DLGAP5Q15398 846 aa13.43□□□□□ -0.26
SND1-212ENST00000485871 SPDYE2Q495Y8 402 aa13.43□□□□□ -0.26
SND1-212ENST00000485871 C12orf60Q5U649 245 aa13.43□□□□□ -0.26
SND1-212ENST00000485871 DPY19L2Q6NUT2 758 aa13.43□□□□□ -0.26
SND1-212ENST00000485871 MICALL2Q8IY33 904 aa13.43□□□□□ -0.26
SND1-212ENST00000485871 SNX21Q969T3 373 aa13.43□□□□□ -0.26
SND1-212ENST00000485871 NEK1Q96PY6 1258 aa13.43□□□□□ -0.26
SND1-212ENST00000485871 UPF3BQ9BZI7 483 aaKnown RBP13.43□□□□□ -0.26
SND1-212ENST00000485871 OSBPL5Q9H0X9 879 aaPredicted RBP13.43□□□□□ -0.26
SND1-212ENST00000485871 CREBZFQ9NS37 354 aa13.43□□□□□ -0.26
SND1-212ENST00000485871 GPRC5DQ9NZD1 345 aa13.43□□□□□ -0.26
SND1-212ENST00000485871 CNOT7Q9UIV1 285 aaKnown RBP13.43□□□□□ -0.26
SND1-212ENST00000485871 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.43□□□□□ -0.26
SND1-212ENST00000485871 NEDD4P46934 1319 aa13.42□□□□□ -0.26
SND1-212ENST00000485871 DDNO94850 711 aaPredicted RBP13.42□□□□□ -0.26
SND1-212ENST00000485871 CASTP20810 708 aaKnown RBP13.42□□□□□ -0.26
SND1-212ENST00000485871 CTCFP49711 727 aaPredicted RBP13.42□□□□□ -0.26
SND1-212ENST00000485871 CACNB3P54284 484 aa13.42□□□□□ -0.26
SND1-212ENST00000485871 EXOSC10Q01780 885 aaKnown RBP13.42□□□□□ -0.26
SND1-212ENST00000485871 AKNAD1Q5T1N1 836 aa13.42□□□□□ -0.26
SND1-212ENST00000485871 RUFY3Q7L099 469 aa13.42□□□□□ -0.26
SND1-212ENST00000485871 MB21D2Q8IYB1 491 aaPredicted RBP13.42□□□□□ -0.26
SND1-212ENST00000485871 IL27Q8NEV9 243 aa13.42□□□□□ -0.26
SND1-212ENST00000485871 MCM9Q9NXL9 1143 aa13.42□□□□□ -0.26
SND1-212ENST00000485871 PCDH10Q9P2E7 1040 aa13.42□□□□□ -0.26
SND1-212ENST00000485871 ZNF70Q9UC06 446 aaPredicted RBP13.42□□□□□ -0.26
SND1-212ENST00000485871 CNTNAP1P78357 1384 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms