RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 ANTXR1Q9H6X2 564 aa22.47■■□□□ 1.19
COL1A1-206ENST00000485870 SH3BP5LQ7L8J4 393 aa22.46■■□□□ 1.19
COL1A1-206ENST00000485870 ADGRA1Q86SQ6 560 aa22.46■■□□□ 1.19
COL1A1-206ENST00000485870 TEX11Q8IYF3 940 aa22.46■■□□□ 1.19
COL1A1-206ENST00000485870 CRBNQ96SW2 442 aa22.46■■□□□ 1.19
COL1A1-206ENST00000485870 LRRCC1Q9C099 1032 aa22.46■■□□□ 1.19
COL1A1-206ENST00000485870 AATFQ9NY61 560 aaKnown RBP eCLIP22.46■■□□□ 1.19
COL1A1-206ENST00000485870 SNCAIPQ9Y6H5 919 aa22.46■■□□□ 1.19
COL1A1-206ENST00000485870 DDTLA6NHG4 134 aaPredicted RBP22.45■■□□□ 1.18
COL1A1-206ENST00000485870 SMARCA5O60264 1052 aaPredicted RBP22.45■■□□□ 1.18
COL1A1-206ENST00000485870 SH3RF3Q8TEJ3 882 aaPredicted RBP22.45■■□□□ 1.18
COL1A1-206ENST00000485870 OTUD5Q96G74 571 aa22.45■■□□□ 1.18
COL1A1-206ENST00000485870 LAMB1P07942 1786 aa22.45■■□□□ 1.18
COL1A1-206ENST00000485870 TBC1D8O95759 1140 aa22.44■■□□□ 1.18
COL1A1-206ENST00000485870 BAG3O95817 575 aa22.44■■□□□ 1.18
COL1A1-206ENST00000485870 MAP4K4O95819 1239 aaPredicted RBP22.44■■□□□ 1.18
COL1A1-206ENST00000485870 CYP7A1P22680 504 aa22.44■■□□□ 1.18
COL1A1-206ENST00000485870 INPP5BP32019 993 aa22.44■■□□□ 1.18
COL1A1-206ENST00000485870 ATRNL1Q5VV63 1379 aa22.44■■□□□ 1.18
COL1A1-206ENST00000485870 DNAJC2Q99543 621 aaKnown RBP22.44■■□□□ 1.18
COL1A1-206ENST00000485870 PCDHB15Q9Y5E8 787 aa22.44■■□□□ 1.18
COL1A1-206ENST00000485870 SPDYE5A6NIY4 337 aa22.43■■□□□ 1.18
COL1A1-206ENST00000485870 INHBEP58166 350 aa22.43■■□□□ 1.18
COL1A1-206ENST00000485870 IFNL1Q8IU54 200 aa22.43■■□□□ 1.18
COL1A1-206ENST00000485870 ZNF112Q9UJU3 913 aa22.43■■□□□ 1.18
COL1A1-206ENST00000485870 IGF2BP3O00425 579 aaKnown RBP eCLIP22.42■■□□□ 1.18
COL1A1-206ENST00000485870 IGSF3O75054 1194 aa22.42■■□□□ 1.18
COL1A1-206ENST00000485870 SLURP2P0DP57 97 aa22.42■■□□□ 1.18
COL1A1-206ENST00000485870 MAP3K12Q12852 859 aa22.42■■□□□ 1.18
COL1A1-206ENST00000485870 MAGEB6Q8N7X4 407 aa22.42■■□□□ 1.18
COL1A1-206ENST00000485870 DCTPP1Q9H773 170 aa22.42■■□□□ 1.18
COL1A1-206ENST00000485870 NPM3O75607 178 aaKnown RBP22.41■■□□□ 1.18
COL1A1-206ENST00000485870 PLCG2P16885 1265 aa22.41■■□□□ 1.18
COL1A1-206ENST00000485870 PPP4CP60510 307 aa22.41■■□□□ 1.18
COL1A1-206ENST00000485870 ERO1BQ86YB8 467 aa22.41■■□□□ 1.18
COL1A1-206ENST00000485870 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.41■■□□□ 1.18
COL1A1-206ENST00000485870 OSBPL5Q9H0X9 879 aaPredicted RBP22.41■■□□□ 1.18
COL1A1-206ENST00000485870 GOLIM4O00461 696 aa22.4■■□□□ 1.18
COL1A1-206ENST00000485870 ALDH1A1P00352 501 aa22.4■■□□□ 1.18
COL1A1-206ENST00000485870 DYNLL1P63167 89 aaKnown RBP22.4■■□□□ 1.18
COL1A1-206ENST00000485870 TTF1Q15361 905 aaPredicted RBP22.4■■□□□ 1.18
COL1A1-206ENST00000485870 MIGA1Q8NAN2 632 aa22.4■■□□□ 1.18
COL1A1-206ENST00000485870 MS4A4AQ96JQ5 239 aa22.4■■□□□ 1.18
COL1A1-206ENST00000485870 BOLA2Q9H3K6 86 aa22.4■■□□□ 1.18
COL1A1-206ENST00000485870 CDK5RAP2Q96SN8 1893 aa22.39■■□□□ 1.18
COL1A1-206ENST00000485870 CAPN15O75808 1086 aa22.39■■□□□ 1.17
COL1A1-206ENST00000485870 GTF2A2P52657 109 aa22.39■■□□□ 1.17
COL1A1-206ENST00000485870 MAPKAPK5Q8IW41 473 aa22.39■■□□□ 1.17
COL1A1-206ENST00000485870 TGFBRAP1Q8WUH2 860 aa22.39■■□□□ 1.17
COL1A1-206ENST00000485870 EDC3Q96F86 508 aaKnown RBP22.39■■□□□ 1.17
COL1A1-206ENST00000485870 PTPN18Q99952 460 aa22.39■■□□□ 1.17
COL1A1-206ENST00000485870 CCL15-CCL14A0A0B4J2E2 113 aa22.38■■□□□ 1.17
COL1A1-206ENST00000485870 TESPA1A2RU30 521 aaPredicted RBP22.38■■□□□ 1.17
COL1A1-206ENST00000485870 PHF20L1A8MW92 1017 aa22.38■■□□□ 1.17
COL1A1-206ENST00000485870 IRF6O14896 467 aa22.38■■□□□ 1.17
COL1A1-206ENST00000485870 ATP5JP18859 108 aa22.38■■□□□ 1.17
COL1A1-206ENST00000485870 PPIL2Q13356 520 aa22.38■■□□□ 1.17
COL1A1-206ENST00000485870 CCL15Q16663 113 aa22.38■■□□□ 1.17
COL1A1-206ENST00000485870 NOL9Q5SY16 702 aaKnown RBP22.38■■□□□ 1.17
COL1A1-206ENST00000485870 OTUD7BQ6GQQ9 843 aa22.38■■□□□ 1.17
COL1A1-206ENST00000485870 BRI3BPQ8WY22 251 aa22.38■■□□□ 1.17
COL1A1-206ENST00000485870 R3HDMLQ9H3Y0 253 aa22.38■■□□□ 1.17
COL1A1-206ENST00000485870 COL2A1P02458 1487 aaPredicted RBP22.38■■□□□ 1.17
COL1A1-206ENST00000485870 FLT1P17948 1338 aa22.37■■□□□ 1.17
COL1A1-206ENST00000485870 FOCADQ5VW36 1801 aa22.37■■□□□ 1.17
COL1A1-206ENST00000485870 FAM196BA6NMK8 535 aa22.37■■□□□ 1.17
COL1A1-206ENST00000485870 PAG1Q9NWQ8 432 aa22.37■■□□□ 1.17
COL1A1-206ENST00000485870 GPR25O00155 361 aa22.36■■□□□ 1.17
COL1A1-206ENST00000485870 PDE6AP16499 860 aa22.36■■□□□ 1.17
COL1A1-206ENST00000485870 MAP3K10Q02779 954 aa22.36■■□□□ 1.17
COL1A1-206ENST00000485870 PPATQ06203 517 aa22.36■■□□□ 1.17
COL1A1-206ENST00000485870 SLC9C2Q5TAH2 1124 aa22.36■■□□□ 1.17
COL1A1-206ENST00000485870 ZNF296Q8WUU4 475 aaPredicted RBP22.36■■□□□ 1.17
COL1A1-206ENST00000485870 CFHR5Q9BXR6 569 aa22.36■■□□□ 1.17
COL1A1-206ENST00000485870 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.36■■□□□ 1.17
COL1A1-206ENST00000485870 CETPP11597 493 aa22.35■■□□□ 1.17
COL1A1-206ENST00000485870 SNAPC2Q13487 334 aa22.35■■□□□ 1.17
COL1A1-206ENST00000485870 DGKZQ13574 1117 aa22.35■■□□□ 1.17
COL1A1-206ENST00000485870 SCYL3Q8IZE3 742 aa22.35■■□□□ 1.17
COL1A1-206ENST00000485870 HAUS7Q99871 368 aa22.35■■□□□ 1.17
COL1A1-206ENST00000485870 PICK1Q9NRD5 415 aa22.35■■□□□ 1.17
COL1A1-206ENST00000485870 TBC1D12O60347 775 aa22.34■■□□□ 1.17
COL1A1-206ENST00000485870 TMED8Q6PL24 325 aaPredicted RBP22.34■■□□□ 1.17
COL1A1-206ENST00000485870 MCOLN1Q9GZU1 580 aa22.34■■□□□ 1.17
COL1A1-206ENST00000485870 SAP30BPQ9UHR5 308 aaKnown RBP22.34■■□□□ 1.17
COL1A1-206ENST00000485870 DOCK1Q14185 1865 aa22.34■■□□□ 1.17
COL1A1-206ENST00000485870 ZNF532Q9HCE3 1301 aa22.33■■□□□ 1.17
COL1A1-206ENST00000485870 USP5P45974 858 aa22.33■■□□□ 1.17
COL1A1-206ENST00000485870 CRHR2Q13324 411 aa22.33■■□□□ 1.17
COL1A1-206ENST00000485870 CERS3Q8IU89 383 aa22.33■■□□□ 1.17
COL1A1-206ENST00000485870 FAM43AQ8N2R8 423 aa22.33■■□□□ 1.17
COL1A1-206ENST00000485870 DHX36Q9H2U1 1008 aaKnown RBP22.33■■□□□ 1.17
COL1A1-206ENST00000485870 ECHDC1Q9NTX5 307 aa22.33■■□□□ 1.17
COL1A1-206ENST00000485870 PALD1Q9ULE6 856 aa22.33■■□□□ 1.17
COL1A1-206ENST00000485870 SIPA1L1O43166 1804 aa22.33■■□□□ 1.16
COL1A1-206ENST00000485870 MAGEB6P1A0A0J9YX57 407 aa22.32■■□□□ 1.16
COL1A1-206ENST00000485870 CTNND1O60716 968 aaKnown RBP22.32■■□□□ 1.16
COL1A1-206ENST00000485870 SLC4A8Q2Y0W8 1093 aa22.32■■□□□ 1.16
COL1A1-206ENST00000485870 NOM1Q5C9Z4 860 aaKnown RBP22.32■■□□□ 1.16
COL1A1-206ENST00000485870 TSHZ3Q63HK5 1081 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms