RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 IKBKEQ14164 716 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 NFKBIBQ15653 356 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 ECM1Q16610 540 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 CNPY4Q8N129 248 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 GIMAP7Q8NHV1 300 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 EZH1Q92800 747 aaPredicted RBP5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 ASIC4Q96FT7 647 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 USP26Q9BXU7 913 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 TUT1Q9H6E5 874 aaKnown RBP5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 AKNAQ7Z591 1439 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 GRIN2BQ13224 1484 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 RAD54L2Q9Y4B4 1467 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 KIF21AQ7Z4S6 1674 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 FAM177BA6PVY3 158 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 CCER2I3L3R5 266 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 ICMTO60725 284 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 ARL4DP49703 201 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 CPSF6Q16630 551 aaKnown RBP eCLIP5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 EXOSC6Q5RKV6 272 aaKnown RBP5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 PEAR1Q5VY43 1037 aaPredicted RBP5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 VSIG10LQ86VR7 867 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 BHLHE41Q9C0J9 482 aaPredicted RBP5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 SOX17Q9H6I2 414 aaPredicted RBP5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 PAK6Q9NQU5 681 aaPredicted RBP5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 ANGEL1Q9UNK9 670 aaKnown RBP5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 USTQ9Y2C2 406 aa5.29□□□□□ -1.56
PRPF38B-205ENST00000485810 FHOD3Q2V2M9 1422 aa5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 UACAQ9BZF9 1416 aa5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 TCOF1Q13428 1488 aaKnown RBP5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 URB2Q14146 1524 aaKnown RBP5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 EHBP1L1Q8N3D4 1523 aa5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 PDS5BQ9NTI5 1447 aa5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 METTL12A8MUP2 240 aa5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 TPD52L2O43399 206 aaKnown RBP5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 BRD1O95696 1058 aa5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 SOX4Q06945 474 aaPredicted RBP5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 GLIPR1L2Q4G1C9 344 aa5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 PAOXQ6QHF9 649 aa5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 GLYCTKQ8IVS8 523 aa5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 GJD3Q8N144 294 aa5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 ASAP3Q8TDY4 903 aa5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 FBXL18Q96ME1 805 aa5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 YTHDC1Q96MU7 727 aaKnown RBP5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 CYP4F12Q9HCS2 524 aa5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 IGSF5Q9NSI5 407 aa5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 ZC3H7BQ9UGR2 993 aaKnown RBP5.28□□□□□ -1.56
PRPF38B-205ENST00000485810 MYOM3Q5VTT5 1437 aa5.27□□□□□ -1.57
PRPF38B-205ENST00000485810 CYP26A1O43174 497 aa5.27□□□□□ -1.57
PRPF38B-205ENST00000485810 USPL1Q5W0Q7 1092 aa5.27□□□□□ -1.57
PRPF38B-205ENST00000485810 TP53INP2Q8IXH6 220 aa5.27□□□□□ -1.57
PRPF38B-205ENST00000485810 SNX29Q8TEQ0 813 aa5.27□□□□□ -1.57
PRPF38B-205ENST00000485810 SREK1Q8WXA9 508 aaKnown RBP5.27□□□□□ -1.57
PRPF38B-205ENST00000485810 PMEPA1Q969W9 287 aa5.27□□□□□ -1.57
PRPF38B-205ENST00000485810 TBC1D32Q96NH3 1257 aa5.27□□□□□ -1.57
PRPF38B-205ENST00000485810 HIRIP3Q9BW71 556 aaPredicted RBP5.27□□□□□ -1.57
PRPF38B-205ENST00000485810 ZFYVE28Q9HCC9 887 aa5.27□□□□□ -1.57
PRPF38B-205ENST00000485810 BSDC1Q9NW68 430 aaPredicted RBP5.27□□□□□ -1.57
PRPF38B-205ENST00000485810 SUPT16HQ9Y5B9 1047 aaKnown RBP5.27□□□□□ -1.57
PRPF38B-205ENST00000485810 CCDC18Q5T9S5 1454 aa5.27□□□□□ -1.57
PRPF38B-205ENST00000485810 UGGT2Q9NYU1 1516 aa5.26□□□□□ -1.57
PRPF38B-205ENST00000485810 PTPN23Q9H3S7 1636 aa5.26□□□□□ -1.57
PRPF38B-205ENST00000485810 NAIPQ13075 1403 aa5.26□□□□□ -1.57
PRPF38B-205ENST00000485810 GAPVD1Q14C86 1478 aa5.26□□□□□ -1.57
PRPF38B-205ENST00000485810 NCOA2Q15596 1464 aa5.26□□□□□ -1.57
PRPF38B-205ENST00000485810 UNCXA6NJT0 531 aa5.26□□□□□ -1.57
PRPF38B-205ENST00000485810 PAPLNO95428 1278 aa5.26□□□□□ -1.57
PRPF38B-205ENST00000485810 USP5P45974 858 aa5.26□□□□□ -1.57
PRPF38B-205ENST00000485810 USP11P51784 963 aa5.26□□□□□ -1.57
PRPF38B-205ENST00000485810 ARHGAP4P98171 946 aa5.26□□□□□ -1.57
PRPF38B-205ENST00000485810 SPTY2D1Q68D10 685 aaPredicted RBP5.26□□□□□ -1.57
PRPF38B-205ENST00000485810 SEZ6L2Q6UXD5 910 aa5.26□□□□□ -1.57
PRPF38B-205ENST00000485810 METTL22Q9BUU2 404 aaPredicted RBP5.26□□□□□ -1.57
PRPF38B-205ENST00000485810 ACTL7BQ9Y614 415 aa5.26□□□□□ -1.57
PRPF38B-205ENST00000485810 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.26□□□□□ -1.57
PRPF38B-205ENST00000485810 PTPRKQ15262 1439 aa5.25□□□□□ -1.57
PRPF38B-205ENST00000485810 CARMIL2Q6F5E8 1435 aa5.25□□□□□ -1.57
PRPF38B-205ENST00000485810 MIA2Q96PC5 1412 aa5.25□□□□□ -1.57
PRPF38B-205ENST00000485810 EDN3P14138 238 aa5.25□□□□□ -1.57
PRPF38B-205ENST00000485810 JUNBP17275 347 aaPredicted RBP5.25□□□□□ -1.57
PRPF38B-205ENST00000485810 GSTM4Q03013 218 aa5.25□□□□□ -1.57
PRPF38B-205ENST00000485810 EHHADHQ08426 723 aa5.25□□□□□ -1.57
PRPF38B-205ENST00000485810 ORC1Q13415 861 aa5.25□□□□□ -1.57
PRPF38B-205ENST00000485810 ZNF423Q2M1K9 1284 aa5.25□□□□□ -1.57
PRPF38B-205ENST00000485810 SPRED2Q7Z698 418 aa5.25□□□□□ -1.57
PRPF38B-205ENST00000485810 TXNDC2Q86VQ3 553 aa5.25□□□□□ -1.57
PRPF38B-205ENST00000485810 LAS1LQ9Y4W2 734 aaKnown RBP5.25□□□□□ -1.57
PRPF38B-205ENST00000485810 MTUS2Q5JR59 1369 aa5.24□□□□□ -1.57
PRPF38B-205ENST00000485810 SUPT6HQ7KZ85 1726 aaKnown RBP5.24□□□□□ -1.57
PRPF38B-205ENST00000485810 KDM5BQ9UGL1 1544 aa5.24□□□□□ -1.57
PRPF38B-205ENST00000485810 DYNC1LI2O43237 492 aaPredicted RBP5.24□□□□□ -1.57
PRPF38B-205ENST00000485810 ECEL1O95672 775 aa5.24□□□□□ -1.57
PRPF38B-205ENST00000485810 NFICP08651 508 aa5.24□□□□□ -1.57
PRPF38B-205ENST00000485810 ADH5P11766 374 aa5.24□□□□□ -1.57
PRPF38B-205ENST00000485810 FAM50AQ14320 339 aaKnown RBP5.24□□□□□ -1.57
PRPF38B-205ENST00000485810 B4GALNT3Q6L9W6 998 aa5.24□□□□□ -1.57
PRPF38B-205ENST00000485810 ZNF574Q6ZN55 896 aaPredicted RBP5.24□□□□□ -1.57
PRPF38B-205ENST00000485810 SND1Q7KZF4 910 aaKnown RBP eCLIP5.24□□□□□ -1.57
PRPF38B-205ENST00000485810 ZNF765Q7L2R6 523 aa5.24□□□□□ -1.57
PRPF38B-205ENST00000485810 ACSS3Q9H6R3 686 aa5.24□□□□□ -1.57
PRPF38B-205ENST00000485810 C1GALT1Q9NS00 363 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms