RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 VGLL4Q14135 290 aa15.2■□□□□ 0.02
PTCD1-205ENST00000485746 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.2■□□□□ 0.02
PTCD1-205ENST00000485746 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.2■□□□□ 0.02
PTCD1-205ENST00000485746 OPTNQ96CV9 577 aa15.2■□□□□ 0.02
PTCD1-205ENST00000485746 DDX4Q9NQI0 724 aaKnown RBP15.2■□□□□ 0.02
PTCD1-205ENST00000485746 ECM29Q5VYK3 1845 aa15.2■□□□□ 0.02
PTCD1-205ENST00000485746 ATP5JP18859 108 aa15.19■□□□□ 0.02
PTCD1-205ENST00000485746 INHBEP58166 350 aa15.19■□□□□ 0.02
PTCD1-205ENST00000485746 AAMPQ13685 434 aa15.19■□□□□ 0.02
PTCD1-205ENST00000485746 TNS4Q8IZW8 715 aa15.19■□□□□ 0.02
PTCD1-205ENST00000485746 MIGA1Q8NAN2 632 aa15.19■□□□□ 0.02
PTCD1-205ENST00000485746 TGFBRAP1Q8WUH2 860 aa15.19■□□□□ 0.02
PTCD1-205ENST00000485746 ZKSCAN4Q969J2 545 aaPredicted RBP15.19■□□□□ 0.02
PTCD1-205ENST00000485746 SAGE1Q9NXZ1 904 aa15.19■□□□□ 0.02
PTCD1-205ENST00000485746 DDTLA6NHG4 134 aaPredicted RBP15.18■□□□□ 0.02
PTCD1-205ENST00000485746 USP5P45974 858 aa15.18■□□□□ 0.02
PTCD1-205ENST00000485746 TM4SF4P48230 202 aa15.18■□□□□ 0.02
PTCD1-205ENST00000485746 PPP4CP60510 307 aa15.18■□□□□ 0.02
PTCD1-205ENST00000485746 DYNLL1P63167 89 aaKnown RBP15.18■□□□□ 0.02
PTCD1-205ENST00000485746 SLC9C2Q5TAH2 1124 aa15.18■□□□□ 0.02
PTCD1-205ENST00000485746 OTUD7BQ6GQQ9 843 aa15.18■□□□□ 0.02
PTCD1-205ENST00000485746 CERS3Q8IU89 383 aa15.18■□□□□ 0.02
PTCD1-205ENST00000485746 OTUD5Q96G74 571 aa15.18■□□□□ 0.02
PTCD1-205ENST00000485746 TRIM34Q9BYJ4 488 aa15.18■□□□□ 0.02
PTCD1-205ENST00000485746 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.18■□□□□ 0.02
PTCD1-205ENST00000485746 PAG1Q9NWQ8 432 aa15.18■□□□□ 0.02
PTCD1-205ENST00000485746 NPM3O75607 178 aaKnown RBP15.17■□□□□ 0.02
PTCD1-205ENST00000485746 INPP5BP32019 993 aa15.17■□□□□ 0.02
PTCD1-205ENST00000485746 GTF2A2P52657 109 aa15.17■□□□□ 0.02
PTCD1-205ENST00000485746 ANKRD45Q5TZF3 282 aa15.17■□□□□ 0.02
PTCD1-205ENST00000485746 TMED8Q6PL24 325 aaPredicted RBP15.17■□□□□ 0.02
PTCD1-205ENST00000485746 ADGRA1Q86SQ6 560 aa15.17■□□□□ 0.02
PTCD1-205ENST00000485746 ERO1BQ86YB8 467 aa15.17■□□□□ 0.02
PTCD1-205ENST00000485746 MAPKAPK5Q8IW41 473 aa15.17■□□□□ 0.02
PTCD1-205ENST00000485746 EXOC6Q8TAG9 804 aa15.17■□□□□ 0.02
PTCD1-205ENST00000485746 CNKSR2Q8WXI2 1034 aa15.17■□□□□ 0.02
PTCD1-205ENST00000485746 HAUS7Q99871 368 aa15.17■□□□□ 0.02
PTCD1-205ENST00000485746 OSBPL5Q9H0X9 879 aaPredicted RBP15.17■□□□□ 0.02
PTCD1-205ENST00000485746 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.17■□□□□ 0.02
PTCD1-205ENST00000485746 ECHDC1Q9NTX5 307 aa15.17■□□□□ 0.02
PTCD1-205ENST00000485746 MAGEB6P1A0A0J9YX57 407 aa15.16■□□□□ 0.02
PTCD1-205ENST00000485746 ALDH1A1P00352 501 aa15.16■□□□□ 0.02
PTCD1-205ENST00000485746 GJA5P36382 358 aa15.16■□□□□ 0.02
PTCD1-205ENST00000485746 SH3BP5LQ7L8J4 393 aa15.16■□□□□ 0.02
PTCD1-205ENST00000485746 EDC3Q96F86 508 aaKnown RBP15.16■□□□□ 0.02
PTCD1-205ENST00000485746 RWDD1Q9H446 243 aaPredicted RBP15.16■□□□□ 0.02
PTCD1-205ENST00000485746 PICK1Q9NRD5 415 aa15.16■□□□□ 0.02
PTCD1-205ENST00000485746 SNCAIPQ9Y6H5 919 aa15.16■□□□□ 0.02
PTCD1-205ENST00000485746 THSD7BQ9C0I4 1608 aa15.16■□□□□ 0.02
PTCD1-205ENST00000485746 MYH2Q9UKX2 1941 aa15.15■□□□□ 0.02
PTCD1-205ENST00000485746 TBC1D8O95759 1140 aa15.15■□□□□ 0.02
PTCD1-205ENST00000485746 HLA-DOAP06340 250 aa15.15■□□□□ 0.02
PTCD1-205ENST00000485746 PDE6AP16499 860 aa15.15■□□□□ 0.02
PTCD1-205ENST00000485746 ZSCAN25Q6NSZ9 544 aa15.15■□□□□ 0.02
PTCD1-205ENST00000485746 IFNL1Q8IU54 200 aa15.15■□□□□ 0.02
PTCD1-205ENST00000485746 CRACR2BQ8N4Y2 399 aaPredicted RBP15.15■□□□□ 0.02
PTCD1-205ENST00000485746 GCC1Q96CN9 775 aa15.15■□□□□ 0.02
PTCD1-205ENST00000485746 DHX36Q9H2U1 1008 aaKnown RBP15.15■□□□□ 0.02
PTCD1-205ENST00000485746 SAP30BPQ9UHR5 308 aaKnown RBP15.15■□□□□ 0.02
PTCD1-205ENST00000485746 ZNF112Q9UJU3 913 aa15.15■□□□□ 0.02
PTCD1-205ENST00000485746 ZNF532Q9HCE3 1301 aa15.15■□□□□ 0.02
PTCD1-205ENST00000485746 CCL15-CCL14A0A0B4J2E2 113 aa15.14■□□□□ 0.01
PTCD1-205ENST00000485746 SPDYE5A6NIY4 337 aa15.14■□□□□ 0.01
PTCD1-205ENST00000485746 ERC2O15083 957 aa15.14■□□□□ 0.01
PTCD1-205ENST00000485746 SNAPC2Q13487 334 aa15.14■□□□□ 0.01
PTCD1-205ENST00000485746 CCL15Q16663 113 aa15.14■□□□□ 0.01
PTCD1-205ENST00000485746 PI4KBQ9UBF8 816 aa15.14■□□□□ 0.01
PTCD1-205ENST00000485746 RFX7Q2KHR2 1363 aa15.13■□□□□ 0.01
PTCD1-205ENST00000485746 CETPP11597 493 aa15.13■□□□□ 0.01
PTCD1-205ENST00000485746 PPATQ06203 517 aa15.13■□□□□ 0.01
PTCD1-205ENST00000485746 PPIL2Q13356 520 aa15.13■□□□□ 0.01
PTCD1-205ENST00000485746 HDAC1Q13547 482 aaPredicted RBP15.13■□□□□ 0.01
PTCD1-205ENST00000485746 SLC4A8Q2Y0W8 1093 aa15.13■□□□□ 0.01
PTCD1-205ENST00000485746 TSHZ3Q63HK5 1081 aa15.13■□□□□ 0.01
PTCD1-205ENST00000485746 CRNKL1Q9BZJ0 848 aaKnown RBP15.13■□□□□ 0.01
PTCD1-205ENST00000485746 PALD1Q9ULE6 856 aa15.13■□□□□ 0.01
PTCD1-205ENST00000485746 FLT1P17948 1338 aa15.13■□□□□ 0.01
PTCD1-205ENST00000485746 FAM196BA6NMK8 535 aa15.12■□□□□ 0.01
PTCD1-205ENST00000485746 IRF6O14896 467 aa15.12■□□□□ 0.01
PTCD1-205ENST00000485746 TBC1D12O60347 775 aa15.12■□□□□ 0.01
PTCD1-205ENST00000485746 CTNND1O60716 968 aaKnown RBP15.12■□□□□ 0.01
PTCD1-205ENST00000485746 POLR3DP05423 398 aaPredicted RBP15.12■□□□□ 0.01
PTCD1-205ENST00000485746 SLURP2P0DP57 97 aa15.12■□□□□ 0.01
PTCD1-205ENST00000485746 IRX6P78412 446 aaPredicted RBP15.12■□□□□ 0.01
PTCD1-205ENST00000485746 NOL9Q5SY16 702 aaKnown RBP15.12■□□□□ 0.01
PTCD1-205ENST00000485746 SCYL3Q8IZE3 742 aa15.12■□□□□ 0.01
PTCD1-205ENST00000485746 ATRNL1Q5VV63 1379 aa15.11■□□□□ 0.01
PTCD1-205ENST00000485746 PHF20L1A8MW92 1017 aa15.11■□□□□ 0.01
PTCD1-205ENST00000485746 ADD2P35612 726 aa15.11■□□□□ 0.01
PTCD1-205ENST00000485746 MAP3K10Q02779 954 aa15.11■□□□□ 0.01
PTCD1-205ENST00000485746 B4GALNT3Q6L9W6 998 aa15.11■□□□□ 0.01
PTCD1-205ENST00000485746 FOXP4Q8IVH2 680 aaPredicted RBP15.11■□□□□ 0.01
PTCD1-205ENST00000485746 MS4A4AQ96JQ5 239 aa15.11■□□□□ 0.01
PTCD1-205ENST00000485746 HERC5Q9UII4 1024 aaKnown RBP15.11■□□□□ 0.01
PTCD1-205ENST00000485746 ZHX2Q9Y6X8 837 aa15.11■□□□□ 0.01
PTCD1-205ENST00000485746 TTC41PQ6P2S7 1318 aa15.11■□□□□ 0.01
PTCD1-205ENST00000485746 AK9Q5TCS8 1911 aa15.1■□□□□ 0.01
PTCD1-205ENST00000485746 TESPA1A2RU30 521 aaPredicted RBP15.1■□□□□ 0.01
PTCD1-205ENST00000485746 GPR25O00155 361 aa15.1■□□□□ 0.01
PTCD1-205ENST00000485746 IGF2BP3O00425 579 aaKnown RBP eCLIP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms