RNA–Protein interactions for RNA: ENST00000485503.1

EGFR-210, Transcript of epidermal growth factor receptor, humanhuman

TSL 4

Gene EGFR, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-210ENST00000485503 CDK5RAP2Q96SN8 1893 aa8.15□□□□□ -1.11
EGFR-210ENST00000485503 FOCADQ5VW36 1801 aa8.15□□□□□ -1.11
EGFR-210ENST00000485503 MINDY4BA8MYZ0 360 aa8.14□□□□□ -1.11
EGFR-210ENST00000485503 ORC4O43929 436 aa8.14□□□□□ -1.11
EGFR-210ENST00000485503 KDM4AO75164 1064 aa8.14□□□□□ -1.11
EGFR-210ENST00000485503 SLC3A2P08195 630 aaKnown RBP8.14□□□□□ -1.11
EGFR-210ENST00000485503 SART3Q15020 963 aaKnown RBP8.14□□□□□ -1.11
EGFR-210ENST00000485503 PPP2R5BQ15173 497 aa8.14□□□□□ -1.11
EGFR-210ENST00000485503 GRIK5Q16478 980 aa8.14□□□□□ -1.11
EGFR-210ENST00000485503 KLHL40Q2TBA0 621 aa8.14□□□□□ -1.11
EGFR-210ENST00000485503 TMEM67Q5HYA8 995 aa8.14□□□□□ -1.11
EGFR-210ENST00000485503 MFSD14BQ5SR56 506 aa8.14□□□□□ -1.11
EGFR-210ENST00000485503 TMEM87AQ8NBN3 555 aa8.14□□□□□ -1.11
EGFR-210ENST00000485503 NKX2-3Q8TAU0 364 aa8.14□□□□□ -1.11
EGFR-210ENST00000485503 MRIQ9BWK5 157 aa8.14□□□□□ -1.11
EGFR-210ENST00000485503 GPHNQ9NQX3 736 aaPredicted RBP8.14□□□□□ -1.11
EGFR-210ENST00000485503 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.14□□□□□ -1.11
EGFR-210ENST00000485503 ROBO3Q96MS0 1386 aa8.13□□□□□ -1.11
EGFR-210ENST00000485503 ZNF646O15015 1829 aaPredicted RBP8.13□□□□□ -1.11
EGFR-210ENST00000485503 DDX60LQ5H9U9 1706 aaKnown RBP8.13□□□□□ -1.11
EGFR-210ENST00000485503 PTPDC1A2A3K4 754 aa8.13□□□□□ -1.11
EGFR-210ENST00000485503 GOLGA8BA8MQT2 603 aa8.13□□□□□ -1.11
EGFR-210ENST00000485503 USP17L12C9JPN9 530 aa8.13□□□□□ -1.11
EGFR-210ENST00000485503 USP17L21D6R901 530 aa8.13□□□□□ -1.11
EGFR-210ENST00000485503 IFIT3O14879 490 aaKnown RBP8.13□□□□□ -1.11
EGFR-210ENST00000485503 JAK2O60674 1132 aa8.13□□□□□ -1.11
EGFR-210ENST00000485503 GTF2IP78347 998 aa8.13□□□□□ -1.11
EGFR-210ENST00000485503 CCT2P78371 535 aaKnown RBP8.13□□□□□ -1.11
EGFR-210ENST00000485503 APOA5Q6Q788 366 aa8.13□□□□□ -1.11
EGFR-210ENST00000485503 FAM184AQ8NB25 1140 aa8.13□□□□□ -1.11
EGFR-210ENST00000485503 SUPT20HQ8NEM7 779 aa8.13□□□□□ -1.11
EGFR-210ENST00000485503 ZSCAN16Q9H4T2 348 aaPredicted RBP8.13□□□□□ -1.11
EGFR-210ENST00000485503 INCENPQ9NQS7 918 aa8.13□□□□□ -1.11
EGFR-210ENST00000485503 JAG2Q9Y219 1238 aa8.13□□□□□ -1.11
EGFR-210ENST00000485503 TCHHQ07283 1943 aa8.13□□□□□ -1.11
EGFR-210ENST00000485503 NAV1Q8NEY1 1877 aa8.13□□□□□ -1.11
EGFR-210ENST00000485503 ERICH2A1L162 156 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 CCDC69A6NI79 296 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 RIMBP2O15034 1052 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 ZBTB43O43298 467 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 PRPF40AO75400 957 aaKnown RBP8.12□□□□□ -1.11
EGFR-210ENST00000485503 CDKL5O76039 1030 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 MBD3O95983 291 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 FDPSP14324 419 aaKnown RBP8.12□□□□□ -1.11
EGFR-210ENST00000485503 CHRNA5P30532 468 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 BTDP43251 543 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 USP5P45974 858 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 METAP2P50579 478 aaKnown RBP eCLIP8.12□□□□□ -1.11
EGFR-210ENST00000485503 PDE4BQ07343 736 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 WTAPQ15007 396 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 SEC23AQ15436 765 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 DIXDC1Q155Q3 683 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 CSPP1Q1MSJ5 1256 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 C12orf60Q5U649 245 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 FOXD4L5Q5VV16 416 aaPredicted RBP8.12□□□□□ -1.11
EGFR-210ENST00000485503 CPLX2Q6PUV4 134 aaKnown RBP8.12□□□□□ -1.11
EGFR-210ENST00000485503 OLFM4Q6UX06 510 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 SYNE3Q6ZMZ3 975 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 SH3RF3Q8TEJ3 882 aaPredicted RBP8.12□□□□□ -1.11
EGFR-210ENST00000485503 FOXD4L4Q8WXT5 416 aaPredicted RBP8.12□□□□□ -1.11
EGFR-210ENST00000485503 VPS33BQ9H267 617 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 NCOA5Q9HCD5 579 aaKnown RBP8.12□□□□□ -1.11
EGFR-210ENST00000485503 PSME4Q14997 1843 aa8.12□□□□□ -1.11
EGFR-210ENST00000485503 MYH1P12882 1939 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 MYH15Q9Y2K3 1946 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 STK36Q9NRP7 1315 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 CCDC196A0A1B0GTZ2 297 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 VPS37CA5D8V6 355 aaPredicted RBP8.11□□□□□ -1.11
EGFR-210ENST00000485503 G3V3G9 751 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 H3BQV1 296 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 CPLX1O14810 134 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 KCNA3P22001 575 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 RHBDL3P58872 404 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 TGFB2P61812 414 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 HDLBPQ00341 1268 aaKnown RBP8.11□□□□□ -1.11
EGFR-210ENST00000485503 KIAA2012Q0VF49 1180 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 RESTQ13127 1097 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 NTRK3Q16288 839 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 CCDC178Q5BJE1 867 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 RRP12Q5JTH9 1297 aaKnown RBP8.11□□□□□ -1.11
EGFR-210ENST00000485503 DCAF8Q5TAQ9 597 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 IFFO2Q5TF58 517 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 STRIP1Q5VSL9 837 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 ATL3Q6DD88 541 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 HHIPL2Q6UWX4 724 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 NFXL1Q6ZNB6 911 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 CDC37L1Q7L3B6 337 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 IQCA1Q86XH1 822 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 AMOTL1Q8IY63 956 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 RTKN2Q8IZC4 609 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 CERS5Q8N5B7 392 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 TTLL6Q8N841 843 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 ZSCAN10Q96SZ4 725 aaPredicted RBP8.11□□□□□ -1.11
EGFR-210ENST00000485503 PSMD1Q99460 953 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 UBAC1Q9BSL1 405 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 PDGFDQ9GZP0 370 aaPredicted RBP8.11□□□□□ -1.11
EGFR-210ENST00000485503 FAM217BQ9NTX9 383 aaPredicted RBP8.11□□□□□ -1.11
EGFR-210ENST00000485503 MCM9Q9NXL9 1143 aa8.11□□□□□ -1.11
EGFR-210ENST00000485503 NAP1L2Q9ULW6 460 aaPredicted RBP8.11□□□□□ -1.11
EGFR-210ENST00000485503 SLC12A7Q9Y666 1083 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms