RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 METTL22Q9BUU2 404 aaPredicted RBP11□□□□□ -0.65
UBR3-210ENST00000484596 LGR6Q9HBX8 967 aa11□□□□□ -0.65
UBR3-210ENST00000484596 VTI1BQ9UEU0 232 aa11□□□□□ -0.65
UBR3-210ENST00000484596 DAGLAQ9Y4D2 1042 aa11□□□□□ -0.65
UBR3-210ENST00000484596 KIF4BQ2VIQ3 1234 aa10.99□□□□□ -0.65
UBR3-210ENST00000484596 SULF2Q8IWU5 870 aa10.99□□□□□ -0.65
UBR3-210ENST00000484596 KCNB2Q92953 911 aa10.99□□□□□ -0.65
UBR3-210ENST00000484596 FAM161BQ96MY7 647 aa10.99□□□□□ -0.65
UBR3-210ENST00000484596 OSBPL7Q9BZF2 842 aa10.99□□□□□ -0.65
UBR3-210ENST00000484596 C1GALT1Q9NS00 363 aa10.99□□□□□ -0.65
UBR3-210ENST00000484596 OAS3Q9Y6K5 1087 aaKnown RBP10.99□□□□□ -0.65
UBR3-210ENST00000484596 WNT11O96014 354 aa10.98□□□□□ -0.65
UBR3-210ENST00000484596 GSTT1P30711 240 aa10.98□□□□□ -0.65
UBR3-210ENST00000484596 ID3Q02535 119 aa10.98□□□□□ -0.65
UBR3-210ENST00000484596 FANCD2OSQ96PS1 177 aa10.98□□□□□ -0.65
UBR3-210ENST00000484596 RNF19AQ9NV58 838 aa10.98□□□□□ -0.65
UBR3-210ENST00000484596 PCDHGC5Q9Y5F6 944 aa10.98□□□□□ -0.65
UBR3-210ENST00000484596 ARNTP27540 789 aa10.97□□□□□ -0.65
UBR3-210ENST00000484596 MSMPQ1L6U9 139 aa10.97□□□□□ -0.65
UBR3-210ENST00000484596 ATXN3LQ9H3M9 355 aa10.97□□□□□ -0.65
UBR3-210ENST00000484596 KIAA1522Q9P206 1035 aaPredicted RBP10.97□□□□□ -0.65
UBR3-210ENST00000484596 CYP26A1O43174 497 aa10.96□□□□□ -0.65
UBR3-210ENST00000484596 NME2P22392 152 aa10.96□□□□□ -0.65
UBR3-210ENST00000484596 DUSP27Q5VZP5 1158 aa10.96□□□□□ -0.65
UBR3-210ENST00000484596 NECAB3Q96P71 396 aaPredicted RBP10.96□□□□□ -0.65
UBR3-210ENST00000484596 DISC1Q9NRI5 854 aa10.96□□□□□ -0.65
UBR3-210ENST00000484596 TPTE2Q6XPS3 522 aa10.95□□□□□ -0.66
UBR3-210ENST00000484596 ZNF765Q7L2R6 523 aa10.95□□□□□ -0.66
UBR3-210ENST00000484596 CRELD1Q96HD1 420 aa10.95□□□□□ -0.66
UBR3-210ENST00000484596 PIDD1Q9HB75 910 aa10.95□□□□□ -0.66
UBR3-210ENST00000484596 USP17L7P0C7H9 530 aa10.94□□□□□ -0.66
UBR3-210ENST00000484596 HNRNPUQ00839 825 aaKnown RBP eCLIP10.94□□□□□ -0.66
UBR3-210ENST00000484596 MAP1SQ66K74 1059 aaPredicted RBP10.94□□□□□ -0.66
UBR3-210ENST00000484596 CYP27A1Q02318 531 aa10.93□□□□□ -0.66
UBR3-210ENST00000484596 ZNF252P-AS1Q0IIN9 211 aa10.93□□□□□ -0.66
UBR3-210ENST00000484596 TTLL4Q14679 1199 aa10.93□□□□□ -0.66
UBR3-210ENST00000484596 EMILIN2Q9BXX0 1053 aa10.93□□□□□ -0.66
UBR3-210ENST00000484596 CBX8Q9HC52 389 aa10.93□□□□□ -0.66
UBR3-210ENST00000484596 PPM1HQ9ULR3 514 aa10.93□□□□□ -0.66
UBR3-210ENST00000484596 ENC1O14682 589 aa10.92□□□□□ -0.66
UBR3-210ENST00000484596 FBXO24O75426 580 aa10.92□□□□□ -0.66
UBR3-210ENST00000484596 TSNAXIP1Q2TAA8 658 aa10.92□□□□□ -0.66
UBR3-210ENST00000484596 OGFOD3Q6PK18 319 aa10.92□□□□□ -0.66
UBR3-210ENST00000484596 MPRIPQ6WCQ1 1025 aa10.92□□□□□ -0.66
UBR3-210ENST00000484596 SMYD4Q8IYR2 804 aaPredicted RBP10.92□□□□□ -0.66
UBR3-210ENST00000484596 GPBAR1Q8TDU6 330 aa10.92□□□□□ -0.66
UBR3-210ENST00000484596 BACH2Q9BYV9 841 aa10.92□□□□□ -0.66
UBR3-210ENST00000484596 LRRC4CQ9HCJ2 640 aa10.92□□□□□ -0.66
UBR3-210ENST00000484596 PAGE1O75459 146 aa10.91□□□□□ -0.66
UBR3-210ENST00000484596 BMP6P22004 513 aa10.91□□□□□ -0.66
UBR3-210ENST00000484596 IRAK1P51617 712 aa10.91□□□□□ -0.66
UBR3-210ENST00000484596 MCTP1Q6DN14 999 aa10.91□□□□□ -0.66
UBR3-210ENST00000484596 TMEM87AQ8NBN3 555 aa10.91□□□□□ -0.66
UBR3-210ENST00000484596 GRIN3AQ8TCU5 1115 aa10.91□□□□□ -0.66
UBR3-210ENST00000484596 ANKRD24Q8TF21 1146 aa10.91□□□□□ -0.66
UBR3-210ENST00000484596 CEP44Q9C0F1 390 aa10.91□□□□□ -0.66
UBR3-210ENST00000484596 RNGTTO60942 597 aaKnown RBP10.9□□□□□ -0.66
UBR3-210ENST00000484596 RECKO95980 971 aa10.9□□□□□ -0.66
UBR3-210ENST00000484596 HCLS1P14317 486 aaPredicted RBP10.9□□□□□ -0.66
UBR3-210ENST00000484596 ST13P50502 369 aaKnown RBP10.9□□□□□ -0.66
UBR3-210ENST00000484596 CDK5R2Q13319 367 aa10.9□□□□□ -0.66
UBR3-210ENST00000484596 TAF1CQ15572 869 aaPredicted RBP10.9□□□□□ -0.66
UBR3-210ENST00000484596 ZC3H12AQ5D1E8 599 aaKnown RBP10.9□□□□□ -0.66
UBR3-210ENST00000484596 CACNA2D2Q9NY47 1150 aa10.9□□□□□ -0.66
UBR3-210ENST00000484596 CCDC39Q9UFE4 941 aa10.9□□□□□ -0.66
UBR3-210ENST00000484596 COL17A1Q9UMD9 1497 aaPredicted RBP10.89□□□□□ -0.67
UBR3-210ENST00000484596 PRNPP04156 253 aa10.89□□□□□ -0.67
UBR3-210ENST00000484596 ZC3H7BQ9UGR2 993 aaKnown RBP10.89□□□□□ -0.67
UBR3-210ENST00000484596 ANGEL1Q9UNK9 670 aaKnown RBP10.89□□□□□ -0.67
UBR3-210ENST00000484596 USP31Q70CQ4 1352 aa10.89□□□□□ -0.67
UBR3-210ENST00000484596 SCAMP3O14828 347 aaKnown RBP10.88□□□□□ -0.67
UBR3-210ENST00000484596 NEFMP07197 916 aa10.88□□□□□ -0.67
UBR3-210ENST00000484596 CTSHP09668 335 aa10.88□□□□□ -0.67
UBR3-210ENST00000484596 ACSBG1Q96GR2 724 aa10.88□□□□□ -0.67
UBR3-210ENST00000484596 METTL5Q9NRN9 209 aaKnown RBP10.88□□□□□ -0.67
UBR3-210ENST00000484596 BSDC1Q9NW68 430 aaPredicted RBP10.88□□□□□ -0.67
UBR3-210ENST00000484596 SAMM50Q9Y512 469 aa10.88□□□□□ -0.67
UBR3-210ENST00000484596 ERVK-24P63145 666 aa10.87□□□□□ -0.67
UBR3-210ENST00000484596 RASIP1Q5U651 963 aa10.87□□□□□ -0.67
UBR3-210ENST00000484596 NFXL1Q6ZNB6 911 aa10.87□□□□□ -0.67
UBR3-210ENST00000484596 PCOLCE2Q9UKZ9 415 aa10.87□□□□□ -0.67
UBR3-210ENST00000484596 TTF2Q9UNY4 1162 aaKnown RBP10.87□□□□□ -0.67
UBR3-210ENST00000484596 FAM87AP0C7U9 286 aa10.86□□□□□ -0.67
UBR3-210ENST00000484596 CYP27C1Q4G0S4 372 aa10.86□□□□□ -0.67
UBR3-210ENST00000484596 RNF214Q8ND24 703 aa10.86□□□□□ -0.67
UBR3-210ENST00000484596 ISL2Q96A47 359 aa10.86□□□□□ -0.67
UBR3-210ENST00000484596 VSIG10LQ86VR7 867 aa10.85□□□□□ -0.67
UBR3-210ENST00000484596 SSU72Q9NP77 194 aaKnown RBP10.85□□□□□ -0.67
UBR3-210ENST00000484596 CSADQ9Y600 493 aa10.85□□□□□ -0.67
UBR3-210ENST00000484596 TRIM37O94972 964 aa10.84□□□□□ -0.67
UBR3-210ENST00000484596 CELA3AP09093 270 aa10.84□□□□□ -0.67
UBR3-210ENST00000484596 TCF3P15923 654 aa10.84□□□□□ -0.67
UBR3-210ENST00000484596 TAL1P17542 331 aaPredicted RBP10.84□□□□□ -0.67
UBR3-210ENST00000484596 LDLRAD1Q5T700 205 aa10.84□□□□□ -0.67
UBR3-210ENST00000484596 LLGL2Q6P1M3 1020 aa10.84□□□□□ -0.67
UBR3-210ENST00000484596 ABI1Q8IZP0 508 aa10.84□□□□□ -0.67
UBR3-210ENST00000484596 NOC4LQ9BVI4 516 aaKnown RBP10.84□□□□□ -0.67
UBR3-210ENST00000484596 SV2BQ7L1I2 683 aa10.83□□□□□ -0.68
UBR3-210ENST00000484596 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.83□□□□□ -0.68
UBR3-210ENST00000484596 KRTAP9-2Q9BYQ4 174 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms