RNA–Protein interactions for RNA: ENST00000484476.5

LDLRAP1-205, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 1 (best)

Gene LDLRAP1, Length 657 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-205ENST00000484476 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.04■□□□□ 0.32
LDLRAP1-205ENST00000484476 MYH13Q9UKX3 1938 aa17.04■□□□□ 0.32
LDLRAP1-205ENST00000484476 IGF2BP3O00425 579 aaKnown RBP eCLIP17.03■□□□□ 0.32
LDLRAP1-205ENST00000484476 RAB11FIP3O75154 756 aa17.03■□□□□ 0.32
LDLRAP1-205ENST00000484476 NPM3O75607 178 aaKnown RBP17.03■□□□□ 0.32
LDLRAP1-205ENST00000484476 IFIT2P09913 472 aaKnown RBP17.03■□□□□ 0.32
LDLRAP1-205ENST00000484476 KIF1BPQ96EK5 621 aa17.03■□□□□ 0.32
LDLRAP1-205ENST00000484476 ERO1AQ96HE7 468 aa17.03■□□□□ 0.32
LDLRAP1-205ENST00000484476 ZBTB40Q9NUA8 1239 aa17.03■□□□□ 0.32
LDLRAP1-205ENST00000484476 CASP8AP2Q9UKL3 1982 aa17.02■□□□□ 0.32
LDLRAP1-205ENST00000484476 APBB1O00213 710 aa17.02■□□□□ 0.32
LDLRAP1-205ENST00000484476 GJA5P36382 358 aa17.02■□□□□ 0.32
LDLRAP1-205ENST00000484476 MAP3K12Q12852 859 aa17.02■□□□□ 0.32
LDLRAP1-205ENST00000484476 TAF1CQ15572 869 aaPredicted RBP17.02■□□□□ 0.32
LDLRAP1-205ENST00000484476 CERS3Q8IU89 383 aa17.02■□□□□ 0.32
LDLRAP1-205ENST00000484476 TEX11Q8IYF3 940 aa17.02■□□□□ 0.32
LDLRAP1-205ENST00000484476 EAF2Q96CJ1 260 aaPredicted RBP17.02■□□□□ 0.32
LDLRAP1-205ENST00000484476 MS4A4AQ96JQ5 239 aa17.02■□□□□ 0.32
LDLRAP1-205ENST00000484476 TRIM34Q9BYJ4 488 aa17.02■□□□□ 0.32
LDLRAP1-205ENST00000484476 DBNLQ9UJU6 430 aaKnown RBP17.02■□□□□ 0.32
LDLRAP1-205ENST00000484476 SNCAIPQ9Y6H5 919 aa17.02■□□□□ 0.32
LDLRAP1-205ENST00000484476 IRF6O14896 467 aa17.01■□□□□ 0.31
LDLRAP1-205ENST00000484476 IDH1O75874 414 aaKnown RBP17.01■□□□□ 0.31
LDLRAP1-205ENST00000484476 INPP5BP32019 993 aa17.01■□□□□ 0.31
LDLRAP1-205ENST00000484476 CRHR2Q13324 411 aa17.01■□□□□ 0.31
LDLRAP1-205ENST00000484476 KIF22Q14807 665 aa17.01■□□□□ 0.31
LDLRAP1-205ENST00000484476 TTF1Q15361 905 aaPredicted RBP17.01■□□□□ 0.31
LDLRAP1-205ENST00000484476 TMED8Q6PL24 325 aaPredicted RBP17.01■□□□□ 0.31
LDLRAP1-205ENST00000484476 ZFPM1Q8IX07 1006 aa17.01■□□□□ 0.31
LDLRAP1-205ENST00000484476 RHPN1Q8TCX5 695 aa17.01■□□□□ 0.31
LDLRAP1-205ENST00000484476 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
LDLRAP1-205ENST00000484476 ZCCHC17Q9NP64 241 aaKnown RBP17.01■□□□□ 0.31
LDLRAP1-205ENST00000484476 ZNF112Q9UJU3 913 aa17.01■□□□□ 0.31
LDLRAP1-205ENST00000484476 ZAP70P43403 619 aa17■□□□□ 0.31
LDLRAP1-205ENST00000484476 SP3Q02447 781 aa17■□□□□ 0.31
LDLRAP1-205ENST00000484476 BRI3BPQ8WY22 251 aa17■□□□□ 0.31
LDLRAP1-205ENST00000484476 PTPN18Q99952 460 aa17■□□□□ 0.31
LDLRAP1-205ENST00000484476 DHX36Q9H2U1 1008 aaKnown RBP17■□□□□ 0.31
LDLRAP1-205ENST00000484476 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17■□□□□ 0.31
LDLRAP1-205ENST00000484476 IL1RAPL2Q9NP60 686 aa17■□□□□ 0.31
LDLRAP1-205ENST00000484476 AATFQ9NY61 560 aaKnown RBP eCLIP17■□□□□ 0.31
LDLRAP1-205ENST00000484476 CTNND1O60716 968 aaKnown RBP16.99■□□□□ 0.31
LDLRAP1-205ENST00000484476 CYP2E1P05181 493 aaPredicted RBP16.99■□□□□ 0.31
LDLRAP1-205ENST00000484476 NOL9Q5SY16 702 aaKnown RBP16.99■□□□□ 0.31
LDLRAP1-205ENST00000484476 FBXO46Q6PJ61 603 aaPredicted RBP16.99■□□□□ 0.31
LDLRAP1-205ENST00000484476 SCYL3Q8IZE3 742 aa16.99■□□□□ 0.31
LDLRAP1-205ENST00000484476 TRIM17Q9Y577 477 aa16.99■□□□□ 0.31
LDLRAP1-205ENST00000484476 CXCL11O14625 94 aa16.98■□□□□ 0.31
LDLRAP1-205ENST00000484476 TBC1D12O60347 775 aa16.98■□□□□ 0.31
LDLRAP1-205ENST00000484476 CYP7A1P22680 504 aa16.98■□□□□ 0.31
LDLRAP1-205ENST00000484476 RHBDL3P58872 404 aa16.98■□□□□ 0.31
LDLRAP1-205ENST00000484476 FASTKD5Q7L8L6 764 aaKnown RBP16.98■□□□□ 0.31
LDLRAP1-205ENST00000484476 R3HDMLQ9H3Y0 253 aa16.98■□□□□ 0.31
LDLRAP1-205ENST00000484476 PI4KBQ9UBF8 816 aa16.98■□□□□ 0.31
LDLRAP1-205ENST00000484476 ZHX2Q9Y6X8 837 aa16.98■□□□□ 0.31
LDLRAP1-205ENST00000484476 DDTLA6NHG4 134 aaPredicted RBP16.97■□□□□ 0.31
LDLRAP1-205ENST00000484476 PPP4CP60510 307 aa16.97■□□□□ 0.31
LDLRAP1-205ENST00000484476 CRACR2BQ8N4Y2 399 aaPredicted RBP16.97■□□□□ 0.31
LDLRAP1-205ENST00000484476 SH3RF3Q8TEJ3 882 aaPredicted RBP16.97■□□□□ 0.31
LDLRAP1-205ENST00000484476 OSBPL5Q9H0X9 879 aaPredicted RBP16.97■□□□□ 0.31
LDLRAP1-205ENST00000484476 EFCC1Q9HA90 598 aa16.97■□□□□ 0.31
LDLRAP1-205ENST00000484476 DDX4Q9NQI0 724 aaKnown RBP16.97■□□□□ 0.31
LDLRAP1-205ENST00000484476 TLR7Q9NYK1 1049 aaKnown RBP16.97■□□□□ 0.31
LDLRAP1-205ENST00000484476 AK9Q5TCS8 1911 aa16.97■□□□□ 0.31
LDLRAP1-205ENST00000484476 HLA-DOAP06340 250 aa16.96■□□□□ 0.31
LDLRAP1-205ENST00000484476 USP5P45974 858 aa16.96■□□□□ 0.31
LDLRAP1-205ENST00000484476 MAP3K10Q02779 954 aa16.96■□□□□ 0.31
LDLRAP1-205ENST00000484476 FAM43AQ8N2R8 423 aa16.96■□□□□ 0.31
LDLRAP1-205ENST00000484476 MAGEB6Q8N7X4 407 aa16.96■□□□□ 0.31
LDLRAP1-205ENST00000484476 TGFBRAP1Q8WUH2 860 aa16.96■□□□□ 0.31
LDLRAP1-205ENST00000484476 HERC5Q9UII4 1024 aaKnown RBP16.96■□□□□ 0.31
LDLRAP1-205ENST00000484476 HPS5Q9UPZ3 1129 aa16.96■□□□□ 0.31
LDLRAP1-205ENST00000484476 MYH2Q9UKX2 1941 aa16.96■□□□□ 0.3
LDLRAP1-205ENST00000484476 PHF20L1A8MW92 1017 aa16.95■□□□□ 0.3
LDLRAP1-205ENST00000484476 BTBD19C9JJ37 291 aa16.95■□□□□ 0.3
LDLRAP1-205ENST00000484476 MLLT1Q03111 559 aaPredicted RBP16.95■□□□□ 0.3
LDLRAP1-205ENST00000484476 SH3BP5LQ7L8J4 393 aa16.95■□□□□ 0.3
LDLRAP1-205ENST00000484476 ANKRD23Q86SG2 305 aa16.95■□□□□ 0.3
LDLRAP1-205ENST00000484476 FOXP4Q8IVH2 680 aaPredicted RBP16.95■□□□□ 0.3
LDLRAP1-205ENST00000484476 ZNF384Q8TF68 577 aa16.95■□□□□ 0.3
LDLRAP1-205ENST00000484476 TBC1D2Q9BYX2 928 aa16.95■□□□□ 0.3
LDLRAP1-205ENST00000484476 PIH1D3Q9NQM4 214 aaKnown RBP16.95■□□□□ 0.3
LDLRAP1-205ENST00000484476 KCNH4Q9UQ05 1017 aa16.95■□□□□ 0.3
LDLRAP1-205ENST00000484476 ATRNL1Q5VV63 1379 aa16.94■□□□□ 0.3
LDLRAP1-205ENST00000484476 PDHXO00330 501 aa16.94■□□□□ 0.3
LDLRAP1-205ENST00000484476 TLR2O60603 784 aa16.94■□□□□ 0.3
LDLRAP1-205ENST00000484476 PTPRAP18433 802 aa16.94■□□□□ 0.3
LDLRAP1-205ENST00000484476 MAPKAPK5Q8IW41 473 aa16.94■□□□□ 0.3
LDLRAP1-205ENST00000484476 CD99L2Q8TCZ2 262 aa16.94■□□□□ 0.3
LDLRAP1-205ENST00000484476 PARK7Q99497 189 aaKnown RBP16.94■□□□□ 0.3
LDLRAP1-205ENST00000484476 LRRCC1Q9C099 1032 aa16.94■□□□□ 0.3
LDLRAP1-205ENST00000484476 C20orf194Q5TEA3 1177 aa16.93■□□□□ 0.3
LDLRAP1-205ENST00000484476 GADL1Q6ZQY3 521 aa16.93■□□□□ 0.3
LDLRAP1-205ENST00000484476 OTOP1Q7RTM1 612 aa16.93■□□□□ 0.3
LDLRAP1-205ENST00000484476 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.93■□□□□ 0.3
LDLRAP1-205ENST00000484476 GPATCH3Q96I76 525 aa16.93■□□□□ 0.3
LDLRAP1-205ENST00000484476 YTHDC1Q96MU7 727 aaKnown RBP16.93■□□□□ 0.3
LDLRAP1-205ENST00000484476 DNAJC2Q99543 621 aaKnown RBP16.93■□□□□ 0.3
LDLRAP1-205ENST00000484476 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.93■□□□□ 0.3
LDLRAP1-205ENST00000484476 AS3MTQ9HBK9 375 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms