RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 SPRED2Q7Z698 418 aa8.66□□□□□ -1.02
SCAF11-207ENST00000484275 MAP1SQ66K74 1059 aaPredicted RBP8.65□□□□□ -1.02
SCAF11-207ENST00000484275 PLD6Q8N2A8 252 aaKnown RBP8.65□□□□□ -1.02
SCAF11-207ENST00000484275 GPBAR1Q8TDU6 330 aa8.65□□□□□ -1.02
SCAF11-207ENST00000484275 CACNA2D2Q9NY47 1150 aa8.65□□□□□ -1.02
SCAF11-207ENST00000484275 RNGTTO60942 597 aaKnown RBP8.64□□□□□ -1.03
SCAF11-207ENST00000484275 NME2P22392 152 aa8.64□□□□□ -1.03
SCAF11-207ENST00000484275 BNIP3Q12983 259 aa8.64□□□□□ -1.03
SCAF11-207ENST00000484275 CYP27C1Q4G0S4 372 aa8.64□□□□□ -1.03
SCAF11-207ENST00000484275 ERICH6Q7L0X2 663 aa8.64□□□□□ -1.03
SCAF11-207ENST00000484275 ISL2Q96A47 359 aa8.64□□□□□ -1.03
SCAF11-207ENST00000484275 NECAB3Q96P71 396 aaPredicted RBP8.64□□□□□ -1.03
SCAF11-207ENST00000484275 OSBPL7Q9BZF2 842 aa8.64□□□□□ -1.03
SCAF11-207ENST00000484275 PAGE1O75459 146 aa8.63□□□□□ -1.03
SCAF11-207ENST00000484275 ITGB5P18084 799 aa8.63□□□□□ -1.03
SCAF11-207ENST00000484275 FMR1Q06787 632 aaKnown RBP eCLIP8.63□□□□□ -1.03
SCAF11-207ENST00000484275 AGBL5Q8NDL9 886 aa8.63□□□□□ -1.03
SCAF11-207ENST00000484275 GRIN3AQ8TCU5 1115 aa8.63□□□□□ -1.03
SCAF11-207ENST00000484275 PCOLCE2Q9UKZ9 415 aa8.63□□□□□ -1.03
SCAF11-207ENST00000484275 WWC3Q9ULE0 1092 aa8.63□□□□□ -1.03
SCAF11-207ENST00000484275 SLC5A6Q9Y289 635 aa8.63□□□□□ -1.03
SCAF11-207ENST00000484275 ENC1O14682 589 aa8.62□□□□□ -1.03
SCAF11-207ENST00000484275 BMP6P22004 513 aa8.62□□□□□ -1.03
SCAF11-207ENST00000484275 RASIP1Q5U651 963 aa8.62□□□□□ -1.03
SCAF11-207ENST00000484275 TPTE2Q6XPS3 522 aa8.62□□□□□ -1.03
SCAF11-207ENST00000484275 DUSP23Q9BVJ7 150 aa8.62□□□□□ -1.03
SCAF11-207ENST00000484275 FBXO24O75426 580 aa8.61□□□□□ -1.03
SCAF11-207ENST00000484275 MAPK8P45983 427 aa8.61□□□□□ -1.03
SCAF11-207ENST00000484275 ERVK-24P63145 666 aa8.61□□□□□ -1.03
SCAF11-207ENST00000484275 RNF214Q8ND24 703 aa8.61□□□□□ -1.03
SCAF11-207ENST00000484275 NTF4P34130 210 aa8.6□□□□□ -1.03
SCAF11-207ENST00000484275 CD96P40200 585 aa8.6□□□□□ -1.03
SCAF11-207ENST00000484275 UBE3DQ7Z6J8 389 aa8.6□□□□□ -1.03
SCAF11-207ENST00000484275 NETO1Q8TDF5 533 aa8.6□□□□□ -1.03
SCAF11-207ENST00000484275 EMILIN2Q9BXX0 1053 aa8.6□□□□□ -1.03
SCAF11-207ENST00000484275 CBX8Q9HC52 389 aa8.6□□□□□ -1.03
SCAF11-207ENST00000484275 CSADQ9Y600 493 aa8.6□□□□□ -1.03
SCAF11-207ENST00000484275 IVNS1ABPQ9Y6Y0 642 aa8.6□□□□□ -1.03
SCAF11-207ENST00000484275 CD8BP10966 210 aa8.59□□□□□ -1.03
SCAF11-207ENST00000484275 GSTT1P30711 240 aa8.59□□□□□ -1.03
SCAF11-207ENST00000484275 OXCT1P55809 520 aa8.59□□□□□ -1.03
SCAF11-207ENST00000484275 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.59□□□□□ -1.03
SCAF11-207ENST00000484275 TOP6BLQ8N6T0 577 aa8.59□□□□□ -1.03
SCAF11-207ENST00000484275 FBF1Q8TES7 1133 aa8.59□□□□□ -1.03
SCAF11-207ENST00000484275 PLAGL2Q9UPG8 496 aa8.59□□□□□ -1.03
SCAF11-207ENST00000484275 PAPLNO95428 1278 aa8.58□□□□□ -1.04
SCAF11-207ENST00000484275 HNRNPUQ00839 825 aaKnown RBP eCLIP8.58□□□□□ -1.04
SCAF11-207ENST00000484275 PLCL1Q15111 1095 aa8.58□□□□□ -1.04
SCAF11-207ENST00000484275 ZNF792Q3KQV3 632 aa8.58□□□□□ -1.04
SCAF11-207ENST00000484275 PPM1JQ5JR12 505 aa8.58□□□□□ -1.04
SCAF11-207ENST00000484275 FAM214BQ7L5A3 538 aa8.58□□□□□ -1.04
SCAF11-207ENST00000484275 STK11IPQ8N1F8 1099 aa8.58□□□□□ -1.04
SCAF11-207ENST00000484275 ACSBG1Q96GR2 724 aa8.58□□□□□ -1.04
SCAF11-207ENST00000484275 HEXIM2Q96MH2 286 aaKnown RBP8.58□□□□□ -1.04
SCAF11-207ENST00000484275 ASB16Q96NS5 453 aa8.58□□□□□ -1.04
SCAF11-207ENST00000484275 RING1Q06587 406 aa8.57□□□□□ -1.04
SCAF11-207ENST00000484275 OGFOD2Q6N063 350 aa8.57□□□□□ -1.04
SCAF11-207ENST00000484275 MISP3Q96FF7 219 aa8.57□□□□□ -1.04
SCAF11-207ENST00000484275 SRCIN1Q9C0H9 1055 aa8.57□□□□□ -1.04
SCAF11-207ENST00000484275 SSU72Q9NP77 194 aaKnown RBP8.57□□□□□ -1.04
SCAF11-207ENST00000484275 DCDC2CA8MYV0 355 aa8.56□□□□□ -1.04
SCAF11-207ENST00000484275 C12orf40Q86WS4 652 aa8.56□□□□□ -1.04
SCAF11-207ENST00000484275 MKNK2Q9HBH9 465 aa8.56□□□□□ -1.04
SCAF11-207ENST00000484275 ADAMTS6Q9UKP5 1117 aa8.56□□□□□ -1.04
SCAF11-207ENST00000484275 PPM1HQ9ULR3 514 aa8.56□□□□□ -1.04
SCAF11-207ENST00000484275 TRIM37O94972 964 aa8.55□□□□□ -1.04
SCAF11-207ENST00000484275 CEACAM5P06731 702 aa8.55□□□□□ -1.04
SCAF11-207ENST00000484275 CELA3AP09093 270 aa8.55□□□□□ -1.04
SCAF11-207ENST00000484275 YBX3P16989 372 aaKnown RBP eCLIP8.55□□□□□ -1.048e-7■□□□□ 10.9
SCAF11-207ENST00000484275 JUNBP17275 347 aaPredicted RBP8.55□□□□□ -1.04
SCAF11-207ENST00000484275 FUT4P22083 530 aa8.55□□□□□ -1.04
SCAF11-207ENST00000484275 PRKCQQ04759 706 aa8.55□□□□□ -1.04
SCAF11-207ENST00000484275 ZSCAN29Q8IWY8 852 aaPredicted RBP8.55□□□□□ -1.04
SCAF11-207ENST00000484275 CEP44Q9C0F1 390 aa8.55□□□□□ -1.04
SCAF11-207ENST00000484275 VAV3Q9UKW4 847 aa8.55□□□□□ -1.04
SCAF11-207ENST00000484275 IFI16Q16666 785 aaKnown RBP8.54□□□□□ -1.04
SCAF11-207ENST00000484275 ALG1LQ6GMV1 187 aa8.54□□□□□ -1.04
SCAF11-207ENST00000484275 ANKRD24Q8TF21 1146 aa8.54□□□□□ -1.04
SCAF11-207ENST00000484275 ASIC4Q96FT7 647 aa8.54□□□□□ -1.04
SCAF11-207ENST00000484275 MBNL3Q9NUK0 354 aaKnown RBP8.54□□□□□ -1.04
SCAF11-207ENST00000484275 BTBD11A6QL63 1104 aa8.53□□□□□ -1.04
SCAF11-207ENST00000484275 P4HBP07237 508 aaKnown RBP8.53□□□□□ -1.04
SCAF11-207ENST00000484275 RNASE1P07998 156 aaKnown RBP8.53□□□□□ -1.04
SCAF11-207ENST00000484275 ITIH2P19823 946 aa8.53□□□□□ -1.04
SCAF11-207ENST00000484275 PTPN11Q06124 597 aaPredicted RBP8.53□□□□□ -1.04
SCAF11-207ENST00000484275 AOC3Q16853 763 aa8.53□□□□□ -1.04
SCAF11-207ENST00000484275 ZBTB37Q5TC79 503 aa8.53□□□□□ -1.04
SCAF11-207ENST00000484275 LLGL2Q6P1M3 1020 aa8.53□□□□□ -1.04
SCAF11-207ENST00000484275 CARMIL2Q6F5E8 1435 aa8.53□□□□□ -1.04
SCAF11-207ENST00000484275 GIPC1O14908 333 aa8.52□□□□□ -1.05
SCAF11-207ENST00000484275 INPP5AQ14642 412 aa8.52□□□□□ -1.05
SCAF11-207ENST00000484275 TNKS2Q9H2K2 1166 aa8.52□□□□□ -1.05
SCAF11-207ENST00000484275 C12orf49Q9H741 205 aa8.52□□□□□ -1.05
SCAF11-207ENST00000484275 PCDHA4Q9UN74 947 aa8.52□□□□□ -1.05
SCAF11-207ENST00000484275 SAMM50Q9Y512 469 aa8.52□□□□□ -1.05
SCAF11-207ENST00000484275 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.52□□□□□ -1.05
SCAF11-207ENST00000484275 USP17L7P0C7H9 530 aa8.51□□□□□ -1.05
SCAF11-207ENST00000484275 KCNA1Q09470 495 aa8.51□□□□□ -1.05
SCAF11-207ENST00000484275 PCNX4Q63HM2 1172 aa8.51□□□□□ -1.05
SCAF11-207ENST00000484275 HRASLS5Q96KN8 279 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms