RNA–Protein interactions for RNA: ENST00000483955.1

SHROOM4-204, Transcript of shroom family member 4, humanhuman

TSL 2

Gene SHROOM4, Length 882 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-204ENST00000483955 DDNO94850 711 aaPredicted RBP10.77□□□□□ -0.69
SHROOM4-204ENST00000483955 APPP05067 770 aa10.77□□□□□ -0.69
SHROOM4-204ENST00000483955 TDO2P48775 406 aa10.77□□□□□ -0.69
SHROOM4-204ENST00000483955 DYNLL1P63167 89 aaKnown RBP10.77□□□□□ -0.69
SHROOM4-204ENST00000483955 ALX1Q15699 326 aa10.77□□□□□ -0.69
SHROOM4-204ENST00000483955 KIF4BQ2VIQ3 1234 aa10.77□□□□□ -0.69
SHROOM4-204ENST00000483955 RNF20Q5VTR2 975 aa10.77□□□□□ -0.69
SHROOM4-204ENST00000483955 AMOTL1Q8IY63 956 aa10.77□□□□□ -0.69
SHROOM4-204ENST00000483955 SH3RF3Q8TEJ3 882 aaPredicted RBP10.77□□□□□ -0.69
SHROOM4-204ENST00000483955 MAP4K1Q92918 833 aa10.77□□□□□ -0.69
SHROOM4-204ENST00000483955 NAPBQ9H115 298 aa10.77□□□□□ -0.69
SHROOM4-204ENST00000483955 USP40Q9NVE5 1235 aa10.77□□□□□ -0.69
SHROOM4-204ENST00000483955 ARPP21Q9UBL0 812 aaPredicted RBP10.77□□□□□ -0.69
SHROOM4-204ENST00000483955 ECM29Q5VYK3 1845 aa10.77□□□□□ -0.69
SHROOM4-204ENST00000483955 GOLGB1Q14789 3259 aaKnown RBP10.76□□□□□ -0.69
SHROOM4-204ENST00000483955 NAV1Q8NEY1 1877 aa10.76□□□□□ -0.69
SHROOM4-204ENST00000483955 WDR90Q96KV7 1748 aa10.76□□□□□ -0.69
SHROOM4-204ENST00000483955 POTEB2H3BUK9 544 aa10.76□□□□□ -0.69
SHROOM4-204ENST00000483955 RHBDL3P58872 404 aa10.76□□□□□ -0.69
SHROOM4-204ENST00000483955 IMMTQ16891 758 aaKnown RBP10.76□□□□□ -0.69
SHROOM4-204ENST00000483955 VPS53Q5VIR6 699 aa10.76□□□□□ -0.69
SHROOM4-204ENST00000483955 CDC42EP5Q6NZY7 148 aa10.76□□□□□ -0.69
SHROOM4-204ENST00000483955 IFNL3Q8IZI9 196 aa10.76□□□□□ -0.69
SHROOM4-204ENST00000483955 SDR42E1Q8WUS8 393 aa10.76□□□□□ -0.69
SHROOM4-204ENST00000483955 ZBED3Q96IU2 234 aaPredicted RBP10.76□□□□□ -0.69
SHROOM4-204ENST00000483955 USP26Q9BXU7 913 aa10.76□□□□□ -0.69
SHROOM4-204ENST00000483955 ADARB2Q9NS39 739 aaKnown RBP10.76□□□□□ -0.69
SHROOM4-204ENST00000483955 HACL1Q9UJ83 578 aa10.76□□□□□ -0.69
SHROOM4-204ENST00000483955 RBM8AQ9Y5S9 174 aaKnown RBP10.76□□□□□ -0.69
SHROOM4-204ENST00000483955 SCN4AP35499 1836 aa10.76□□□□□ -0.69
SHROOM4-204ENST00000483955 FOCADQ5VW36 1801 aa10.76□□□□□ -0.69
SHROOM4-204ENST00000483955 DDX60LQ5H9U9 1706 aaKnown RBP10.75□□□□□ -0.69
SHROOM4-204ENST00000483955 COL2A1P02458 1487 aaPredicted RBP10.75□□□□□ -0.69
SHROOM4-204ENST00000483955 GSG1L2A8MUP6 293 aa10.75□□□□□ -0.69
SHROOM4-204ENST00000483955 WNT10BO00744 389 aa10.75□□□□□ -0.69
SHROOM4-204ENST00000483955 SEC24BO95487 1268 aa10.75□□□□□ -0.69
SHROOM4-204ENST00000483955 PTH1RQ03431 593 aa10.75□□□□□ -0.69
SHROOM4-204ENST00000483955 TNFAIP1Q13829 316 aa10.75□□□□□ -0.69
SHROOM4-204ENST00000483955 FKBP1CQ5VVH2 108 aa10.75□□□□□ -0.69
SHROOM4-204ENST00000483955 TGFBRAP1Q8WUH2 860 aa10.75□□□□□ -0.69
SHROOM4-204ENST00000483955 PRMT6Q96LA8 375 aaPredicted RBP10.75□□□□□ -0.69
SHROOM4-204ENST00000483955 IDI2Q9BXS1 227 aa10.75□□□□□ -0.69
SHROOM4-204ENST00000483955 EPB41L4AQ9HCS5 686 aaPredicted RBP10.75□□□□□ -0.69
SHROOM4-204ENST00000483955 DCP1AQ9NPI6 582 aaPredicted RBP10.75□□□□□ -0.69
SHROOM4-204ENST00000483955 FLT1P17948 1338 aa10.75□□□□□ -0.69
SHROOM4-204ENST00000483955 LAMB1P07942 1786 aa10.75□□□□□ -0.69
SHROOM4-204ENST00000483955 LAMA4Q16363 1823 aa10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 FOXP2O15409 715 aa10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 PRKAB2O43741 272 aa10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 ENTPD3O75355 529 aa10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 WDHD1O75717 1129 aaPredicted RBP10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 FGAP02671 866 aa10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 ZKSCAN1P17029 563 aaPredicted RBP10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 HSPA4P34932 840 aa10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 TNNI2P48788 182 aa10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 RBM25P49756 843 aaKnown RBP10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 ANAPC15P60006 121 aa10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 TBC1D10BQ4KMP7 808 aaPredicted RBP10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 USP50Q70EL3 339 aaPredicted RBP10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 SAMD7Q7Z3H4 446 aa10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 APOBEC3FQ8IUX4 373 aaKnown RBP10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 C22orf23Q9BZE7 217 aa10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 TDRD3Q9H7E2 651 aaKnown RBP10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 CDK5RAP2Q96SN8 1893 aa10.74□□□□□ -0.69
SHROOM4-204ENST00000483955 SHTN1A0MZ66 631 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 CLRN2A0PK11 232 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 ZNF213O14771 459 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 HLA-DOAP06340 250 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 SLC3A2P08195 630 aaKnown RBP10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 PCP11498 1178 aaKnown RBP10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 EPHX2P34913 555 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 EPS15P42566 896 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 PICALMQ13492 652 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 KRT32Q14532 448 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 NECTIN1Q15223 517 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 SBK1Q52WX2 424 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 RBM26Q5T8P6 1007 aaKnown RBP10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 CREB3L3Q68CJ9 461 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 FAM83AQ86UY5 434 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 PNMA8AQ86V59 439 aaPredicted RBP10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 MAPKAPK5Q8IW41 473 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 TRPM4Q8TD43 1214 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 TBC1D32Q96NH3 1257 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 OSBPL5Q9H0X9 879 aaPredicted RBP10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 DHX36Q9H2U1 1008 aaKnown RBP10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 VEZTQ9HBM0 779 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 MCM9Q9NXL9 1143 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 ZNF70Q9UC06 446 aaPredicted RBP10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 MKRN1Q9UHC7 482 aaKnown RBP10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 PCDHAC2Q9Y5I4 1007 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 PITPNM2Q9BZ72 1349 aa10.73□□□□□ -0.69
SHROOM4-204ENST00000483955 SLC27A2O14975 620 aa10.72□□□□□ -0.69
SHROOM4-204ENST00000483955 ECM2O94769 699 aaPredicted RBP10.72□□□□□ -0.69
SHROOM4-204ENST00000483955 EGFRP00533 1210 aa10.72□□□□□ -0.69
SHROOM4-204ENST00000483955 POLR3DP05423 398 aaPredicted RBP10.72□□□□□ -0.69
SHROOM4-204ENST00000483955 NT5C2P49902 561 aa10.72□□□□□ -0.69
SHROOM4-204ENST00000483955 NBPF9Q3BBW0 867 aa10.72□□□□□ -0.69
SHROOM4-204ENST00000483955 TTC6Q86TZ1 520 aa10.72□□□□□ -0.69
SHROOM4-204ENST00000483955 IL27Q8NEV9 243 aa10.72□□□□□ -0.69
SHROOM4-204ENST00000483955 RNF41Q9H4P4 317 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms