RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 SCYL3Q8IZE3 742 aa16.14■□□□□ 0.17
UBR4-213ENST00000483922 SLAIN1Q8ND83 568 aa16.14■□□□□ 0.17
UBR4-213ENST00000483922 PARK7Q99497 189 aaKnown RBP16.14■□□□□ 0.17
UBR4-213ENST00000483922 IDI2Q9BXS1 227 aa16.14■□□□□ 0.17
UBR4-213ENST00000483922 SALL1Q9NSC2 1324 aa16.14■□□□□ 0.17
UBR4-213ENST00000483922 FARP2O94887 1054 aaPredicted RBP16.13■□□□□ 0.17
UBR4-213ENST00000483922 INHAP05111 366 aa16.13■□□□□ 0.17
UBR4-213ENST00000483922 LDHBP07195 334 aaKnown RBP16.13■□□□□ 0.17
UBR4-213ENST00000483922 ADORA1P30542 326 aa16.13■□□□□ 0.17
UBR4-213ENST00000483922 UBXN2AP68543 259 aa16.13■□□□□ 0.17
UBR4-213ENST00000483922 ZNF384Q8TF68 577 aa16.13■□□□□ 0.17
UBR4-213ENST00000483922 LRCH3Q96II8 777 aa16.13■□□□□ 0.17
UBR4-213ENST00000483922 HTATIP2Q9BUP3 242 aa16.13■□□□□ 0.17
UBR4-213ENST00000483922 CRISPLD2Q9H0B8 497 aa16.13■□□□□ 0.17
UBR4-213ENST00000483922 SIL1Q9H173 461 aa16.13■□□□□ 0.17
UBR4-213ENST00000483922 STAP2Q9UGK3 403 aa16.13■□□□□ 0.17
UBR4-213ENST00000483922 PHIPQ8WWQ0 1821 aa16.12■□□□□ 0.17
UBR4-213ENST00000483922 ENTPD3O75355 529 aa16.12■□□□□ 0.17
UBR4-213ENST00000483922 GADL1Q6ZQY3 521 aa16.12■□□□□ 0.17
UBR4-213ENST00000483922 FAM9BQ8IZU0 186 aa16.12■□□□□ 0.17
UBR4-213ENST00000483922 DEFB118Q96PH6 123 aa16.12■□□□□ 0.17
UBR4-213ENST00000483922 PAK6Q9NQU5 681 aaPredicted RBP16.12■□□□□ 0.17
UBR4-213ENST00000483922 GAKO14976 1311 aa16.12■□□□□ 0.17
UBR4-213ENST00000483922 PTPRCP08575 1304 aa16.12■□□□□ 0.17
UBR4-213ENST00000483922 AK9Q5TCS8 1911 aa16.11■□□□□ 0.17
UBR4-213ENST00000483922 MNX1P50219 401 aaPredicted RBP16.11■□□□□ 0.17
UBR4-213ENST00000483922 IRF5Q13568 498 aa16.11■□□□□ 0.17
UBR4-213ENST00000483922 RRP1BQ14684 758 aaKnown RBP16.11■□□□□ 0.17
UBR4-213ENST00000483922 ATP2B3Q16720 1220 aa16.11■□□□□ 0.17
UBR4-213ENST00000483922 TREML2Q5T2D2 321 aa16.11■□□□□ 0.17
UBR4-213ENST00000483922 FASTKD5Q7L8L6 764 aaKnown RBP16.11■□□□□ 0.17
UBR4-213ENST00000483922 PXYLP1Q8TE99 480 aa16.11■□□□□ 0.17
UBR4-213ENST00000483922 DIS3LQ8TF46 1054 aaKnown RBP16.11■□□□□ 0.17
UBR4-213ENST00000483922 PAWRQ96IZ0 340 aaKnown RBP16.11■□□□□ 0.17
UBR4-213ENST00000483922 PA2G4Q9UQ80 394 aaKnown RBP16.11■□□□□ 0.17
UBR4-213ENST00000483922 NR2E3Q9Y5X4 410 aa16.11■□□□□ 0.17
UBR4-213ENST00000483922 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.11■□□□□ 0.17
UBR4-213ENST00000483922 MYH13Q9UKX3 1938 aa16.1■□□□□ 0.17
UBR4-213ENST00000483922 CIAO1O76071 339 aa16.1■□□□□ 0.17
UBR4-213ENST00000483922 TFRCP02786 760 aaKnown RBP16.1■□□□□ 0.17
UBR4-213ENST00000483922 SLC45A1Q9Y2W3 748 aa16.1■□□□□ 0.17
UBR4-213ENST00000483922 ALPK3Q96L96 1907 aa16.09■□□□□ 0.17
UBR4-213ENST00000483922 TRIM75PA6NK02 468 aa16.09■□□□□ 0.17
UBR4-213ENST00000483922 TNPO2O14787 897 aaKnown RBP16.09■□□□□ 0.17
UBR4-213ENST00000483922 ZBTB22O15209 634 aa16.09■□□□□ 0.17
UBR4-213ENST00000483922 EVI5O60447 810 aa16.09■□□□□ 0.17
UBR4-213ENST00000483922 ZEB1P37275 1124 aaPredicted RBP16.09■□□□□ 0.17
UBR4-213ENST00000483922 RHBDL3P58872 404 aa16.09■□□□□ 0.17
UBR4-213ENST00000483922 TIMM10P62072 90 aa16.09■□□□□ 0.17
UBR4-213ENST00000483922 TRIM32Q13049 653 aa16.09■□□□□ 0.17
UBR4-213ENST00000483922 CCDC102BQ68D86 513 aa16.09■□□□□ 0.17
UBR4-213ENST00000483922 FAM163AQ96GL9 167 aaPredicted RBP16.09■□□□□ 0.17
UBR4-213ENST00000483922 PICK1Q9NRD5 415 aa16.09■□□□□ 0.17
UBR4-213ENST00000483922 GJD2Q9UKL4 321 aa16.09■□□□□ 0.17
UBR4-213ENST00000483922 DENND2AQ9ULE3 1009 aa16.09■□□□□ 0.17
UBR4-213ENST00000483922 PTPRFP10586 1907 aa16.09■□□□□ 0.17
UBR4-213ENST00000483922 DOCK3Q8IZD9 2030 aa16.09■□□□□ 0.17
UBR4-213ENST00000483922 FAM196BA6NMK8 535 aa16.08■□□□□ 0.16
UBR4-213ENST00000483922 DLL1O00548 723 aa16.08■□□□□ 0.16
UBR4-213ENST00000483922 CTNND1O60716 968 aaKnown RBP16.08■□□□□ 0.16
UBR4-213ENST00000483922 RASGRF1Q13972 1273 aa16.08■□□□□ 0.16
UBR4-213ENST00000483922 ANKRD13CQ8N6S4 541 aa16.08■□□□□ 0.16
UBR4-213ENST00000483922 SLC17A8Q8NDX2 589 aa16.08■□□□□ 0.16
UBR4-213ENST00000483922 GDF15Q99988 308 aa16.08■□□□□ 0.16
UBR4-213ENST00000483922 CEP126Q9P2H0 1117 aa16.08■□□□□ 0.16
UBR4-213ENST00000483922 DOCK2Q92608 1830 aa16.08■□□□□ 0.16
UBR4-213ENST00000483922 PICALMQ13492 652 aa16.07■□□□□ 0.16
UBR4-213ENST00000483922 FBXO3Q9UK99 471 aa16.07■□□□□ 0.16
UBR4-213ENST00000483922 AGTPBP1Q9UPW5 1226 aa16.07■□□□□ 0.16
UBR4-213ENST00000483922 LRRFIP2Q9Y608 721 aaKnown RBP16.07■□□□□ 0.16
UBR4-213ENST00000483922 MYH2Q9UKX2 1941 aa16.07■□□□□ 0.16
UBR4-213ENST00000483922 A0A1W2PPC1 479 aa16.06■□□□□ 0.16
UBR4-213ENST00000483922 SEMA3EO15041 775 aa16.06■□□□□ 0.16
UBR4-213ENST00000483922 ANP32CO43423 234 aa16.06■□□□□ 0.16
UBR4-213ENST00000483922 PEX10O60683 326 aa16.06■□□□□ 0.16
UBR4-213ENST00000483922 BTDP43251 543 aa16.06■□□□□ 0.16
UBR4-213ENST00000483922 ZSCAN29Q8IWY8 852 aaPredicted RBP16.06■□□□□ 0.16
UBR4-213ENST00000483922 GNL3LQ9NVN8 582 aaKnown RBP16.06■□□□□ 0.16
UBR4-213ENST00000483922 UNC80Q8N2C7 3258 aa16.06■□□□□ 0.16
UBR4-213ENST00000483922 GPR75-ASB3A0A0A6YYF3 556 aa16.05■□□□□ 0.16
UBR4-213ENST00000483922 TBC1D12O60347 775 aa16.05■□□□□ 0.16
UBR4-213ENST00000483922 IL15P40933 162 aaPredicted RBP16.05■□□□□ 0.16
UBR4-213ENST00000483922 JAG1P78504 1218 aa16.05■□□□□ 0.16
UBR4-213ENST00000483922 MECOMQ03112 1051 aa16.05■□□□□ 0.16
UBR4-213ENST00000483922 SLFN5Q08AF3 891 aa16.05■□□□□ 0.16
UBR4-213ENST00000483922 SMCR8Q8TEV9 937 aaPredicted RBP16.05■□□□□ 0.16
UBR4-213ENST00000483922 CDCA7LQ96GN5 454 aa16.05■□□□□ 0.16
UBR4-213ENST00000483922 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.05■□□□□ 0.16
UBR4-213ENST00000483922 COPRSQ9NQ92 184 aa16.05■□□□□ 0.16
UBR4-213ENST00000483922 ABCF2Q9UG63 623 aa16.05■□□□□ 0.16
UBR4-213ENST00000483922 TAOK2Q9UL54 1235 aa16.05■□□□□ 0.16
UBR4-213ENST00000483922 DOCK1Q14185 1865 aa16.05■□□□□ 0.16
UBR4-213ENST00000483922 SPP2Q13103 211 aa16.04■□□□□ 0.16
UBR4-213ENST00000483922 FAM110CQ1W6H9 321 aa16.04■□□□□ 0.16
UBR4-213ENST00000483922 MROH7-TTC4A0A0A0MT08 1334 aa16.03■□□□□ 0.16
UBR4-213ENST00000483922 LAMA2P24043 3122 aaKnown RBP16.03■□□□□ 0.16
UBR4-213ENST00000483922 BMP8BP34820 402 aa16.03■□□□□ 0.16
UBR4-213ENST00000483922 POTEEQ6S8J3 1075 aa16.03■□□□□ 0.16
UBR4-213ENST00000483922 PI16Q6UXB8 463 aa16.03■□□□□ 0.16
UBR4-213ENST00000483922 TBC1D9Q6ZT07 1266 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms